Rv3862c - c.81dupT
Drug resistance types
22 Sensitive
3 RR-TB
4 HR-TB
13 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 5 |
| lineage4.6.1.1;lineage4.6.1.2 | 1 |
| lineage4.5 | 7 |
| lineage2.2.1 | 9 |
| lineage4.8 | 7 |
| lineage3 | 2 |
| lineage4.3.4.1 | 3 |
| lineage4.2.1 | 1 |
| lineage2.2.1.1 | 3 |
| lineage2.2.2 | 2 |
| lineage4.4.1.1 | 3 |
| lineage4.3.4.2 | 4 |
| lineage4.6.3 | 1 |
| lineage2.2.1;lineage4 | 1 |
| 1 | |
| lineage4.2.1.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 53 |
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11775717 | Sensitive | lineage4.3.3 | None | ERR987697 | Sensitive | lineage4.6.1.1;lineage4.6.1.2 | None | SRR671757 | RR-TB | lineage4.5 | cn | SRR15723268 | Sensitive | lineage2.2.1 | None | SRR18715028 | HR-TB | lineage4.8 | None | ERR4810834 | Other | lineage2.2.1 | cn | ERR4553722 | MDR-TB | lineage4.8 | None | ERR4810534 | Sensitive | lineage2.2.1 | cn | ERR3275352 | Sensitive | lineage4.8 | nl | ERR2446305 | Sensitive | lineage4.8 | nl | SRR18149446 | Sensitive | lineage3 | None | ERR2517470 | Sensitive | lineage4.8 | nl | SRR24255984 | Sensitive | lineage4.8 | None | SRR25207062 | MDR-TB | lineage2.2.1 | None | ERR3287560 | MDR-TB | lineage4.3.4.1 | None | SRR6797496 | Other | lineage3 | None | SRR11662472 | MDR-TB | lineage2.2.1 | None | SRR28498706 | MDR-TB | lineage4.2.1 | None | ERR4811305 | RR-TB | lineage4.5 | cn | ERR4799999 | MDR-TB | lineage2.2.1.1 | in | SRR16058112 | Sensitive | lineage2.2.2 | None | ERR9125802 | Sensitive | lineage2.2.2 | None | SRR1723501 | Other | lineage2.2.1 | cn | ERR11069081 | Sensitive | lineage4.4.1.1 | None | SRR18914182 | HR-TB | lineage2.2.1 | None | ERR2653142 | MDR-TB | lineage4.3.4.2 | None | ERR6326069 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR551852 | Sensitive | lineage4.4.1.1 | cg | SRR25206941 | RR-TB | lineage4.5 | None | ERR551853 | Sensitive | lineage4.4.1.1 | None | SRR10380146 | HR-TB | lineage4.8 | None | ERR5530521 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR13583366 | MDR-TB | lineage4.3.4.2 | None | ERR1023374 | Sensitive | lineage4.6.3 | None | SRR19241771 | HR-TB | lineage4.3.4.2 | None | SRR25514907 | Sensitive | lineage2.2.1 | None | SRR7645889 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | ERR718560 | Sensitive | lineage4.5 | th | SRR19317530 | Other | lineage4.5 | None | SRR10809045 | Sensitive | lineage4.5 | None | ERR4799593 | Sensitive | lineage4.3.3 | in | ERR4553457 | MDR-TB | None | SRR26112087 | Other | lineage4.2.1.1 | None | SRR6824334 | MDR-TB | lineage2.2.1.1 | cn | ERR5979488 | Sensitive | lineage4.1.2.1 | None | ERR775363 | MDR-TB | lineage4.1.2 | pe | SRR11033652 | Sensitive | lineage4.3.3 | None | ERR117462 | Pre-XDR-TB | lineage2.2.1 | ru | SRR16370616 | Other | lineage4.5 | None | ERR3148221 | MDR-TB | lineage4.3.3 | mx | SRR6824431 | MDR-TB | lineage2.2.1.1 | cn | ERR2653196 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4799466 | Sensitive | lineage4.3.3 | in |
|---|
