Rv3919c - c.48delT
Drug resistance types
0 Sensitive
10 RR-TB
9 HR-TB
24 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 7 |
| lineage3 | 19 |
| lineage4.1.1 | 3 |
| lineage1.1.1.1 | 2 |
| lineage4.6.5 | 1 |
| lineage1.2.1.1 | 5 |
| lineage4.6.2.2 | 10 |
| lineage6.3.1 | 2 |
| lineage4.5 | 4 |
| lineage4.8 | 2 |
| lineage3.1.2 | 1 |
| lineage1.2.2.2 | 3 |
| lineage5.1.5 | 1 |
| 1 | |
| lineage2.2.1 | 3 |
| lineage1.1.2 | 3 |
| lineage1.2.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 68 |
Geographic prevalence
Country level data for this variant is available for 32 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5338517 | MDR-TB | lineage4.1.1.3 | None | ERR2510536 | MDR-TB | lineage3 | None | ERR751388 | HR-TB | lineage4.1.1 | pe | DRR184634 | Other | lineage1.1.1.1 | vn | SRR5818696 | MDR-TB | lineage4.6.5 | dj | SRR6397953 | RR-TB | lineage3 | ca | SRR6397649 | RR-TB | lineage3 | ca | SAMN02414955 | MDR-TB | lineage1.2.1.1 | se | SRR6397583 | RR-TB | lineage3 | ca | SRR6397731 | RR-TB | lineage3 | ca | ERR2517030 | Other | lineage4.6.2.2 | gb | SRR6397506 | RR-TB | lineage3 | ca | ERR3170411 | HR-TB | lineage6.3.1 | gh | ERR3170412 | Other | lineage6.3.1 | gh | ERR4822158 | Other | lineage4.6.2.2 | None | ERR4822629 | Other | lineage3 | None | ERR2516147 | Other | lineage4.5 | None | ERR4827544 | HR-TB | lineage4.8 | None | ERR2516889 | Other | lineage4.6.2.2 | gb | ERR2516930 | Other | lineage4.6.2.2 | gb | ERR3256127 | MDR-TB | lineage4.1.1.3 | ph | ERR4797942 | MDR-TB | lineage3 | in | ERR4822341 | MDR-TB | lineage4.1.1.3 | jp | ERR3256238 | MDR-TB | lineage4.1.1.3 | ph | ERR2516952 | Other | lineage4.6.2.2 | gb | ERR4799247 | Other | lineage3 | in | ERR3256128 | MDR-TB | lineage4.1.1.3 | ph | ERR4798400 | MDR-TB | lineage3 | in | ERR4799871 | MDR-TB | lineage3 | in | ERR4798524 | Other | lineage3.1.2 | in | ERR4800535 | HR-TB | lineage1.2.2.2 | in | ERR4799421 | Pre-XDR-TB | lineage3 | in | ERR4814484 | Other | lineage3 | gb | ERR4829969 | MDR-TB | lineage3 | pk | ERR4024879 | HR-TB | lineage4.1.1 | None | ERR4829972 | MDR-TB | lineage3 | pk | ERR4815915 | Pre-XDR-TB | lineage3 | gb | DRR130056 | MDR-TB | lineage4.1.1.3 | None | ERR4816114 | Other | lineage4.6.2.2 | gb | ERR10680172 | RR-TB | lineage5.1.5 | None | ERR4195751 | Other | lineage4.5 | None | ERR4423776 | RR-TB | lineage4.6.2.2 | None | ERR9891981 | HR-TB | lineage3 | None | ERR4423775 | RR-TB | lineage4.6.2.2 | None | ERR8774497 | RR-TB | lineage4.6.2.2 | None | ERR8774499 | RR-TB | lineage4.6.2.2 | None | SRR22251101 | MDR-TB | lineage4.1.1.3 | None | ERR4553672 | MDR-TB | None | ERR2513473 | Other | lineage3 | gb | ERR6865659 | HR-TB | lineage4.1.1 | None | SRR22137417 | Pre-XDR-TB | lineage2.2.1 | None | ERR9121302 | Other | lineage4.5 | None | SRR1163288 | MDR-TB | lineage1.2.1.1 | None | SRR10500317 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR11348196 | HR-TB | lineage1.1.2 | None | SRR10500318 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR15316264 | MDR-TB | lineage4.5 | None | SRR1165515 | MDR-TB | lineage1.2.1.1 | None | SRR1165585 | MDR-TB | lineage1.2.1.1 | None | SRR15014706 | MDR-TB | lineage1.1.2 | None | SRR1163345 | MDR-TB | lineage1.2.1.1 | None | SRR15014764 | MDR-TB | lineage1.1.2 | None | SRR15506900 | Pre-XDR-TB | lineage2.2.1 | None | SRR15465764 | Pre-XDR-TB | lineage2.2.1 | None | SRR21657215 | HR-TB | lineage1.1.1.1 | None | ERR11082673 | MDR-TB | lineage4.8 | None | ERR11068145 | Other | lineage3 | None | SRR27450287 | Other | lineage1.2.1.2.1 | None |
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