lineage | Count |
---|---|
lineage1.2.1.2.1 | 4 |
lineage4.1.2 | 1 |
lineage4.1.1 | 9 |
lineage4.3.4.2 | 1 |
lineage4.1.2.1 | 41 |
lineage3 | 4 |
lineage1.1.1.1 | 3 |
lineage1.1.2 | 2 |
lineage4.3.4.1 | 2 |
lineage4.3.2.1 | 3 |
lineage3.1.2.1 | 1 |
lineage4.1.1.3 | 1 |
lineage2.2.2;lineage2.2.1 | 1 |
lineage4.4.2 | 2 |
lineage4.4.1.1 | 1 |
lineage4.7 | 1 |
lineage1.1.1 | 1 |
lineage4.3.3 | 2 |
lineage6.3.1 | 2 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 83 |
ID | Drug resistance | Lineage | Country iso2 | ERR3256258 | MDR-TB | lineage1.2.1.2.1 | ph | ERR144578 | Sensitive | lineage4.1.2 | ru | ERR751410 | MDR-TB | lineage4.1.1 | pe | ERR3287847 | MDR-TB | lineage4.3.4.2 | pe | ERR386971 | MDR-TB | lineage4.1.2.1 | None | ERR11049512 | MDR-TB | lineage4.1.2.1 | None | ERR6866305 | MDR-TB | lineage4.1.1 | None | ERR4799000 | MDR-TB | lineage3 | in | ERR6866286 | MDR-TB | lineage4.1.1 | None | ERR751413 | MDR-TB | lineage4.1.1 | pe | ERR7911286 | MDR-TB | lineage1.1.1.1 | vn | ERR751520 | MDR-TB | lineage4.1.1 | pe | ERR7902768 | Sensitive | lineage1.1.2 | None | ERR7764328 | HR-TB | lineage4.3.4.1 | None | SRR3085366 | MDR-TB | lineage4.1.2.1 | None | SRR13870419 | Pre-XDR-TB | lineage4.1.1 | None | SRR15014677 | MDR-TB | lineage1.1.2 | None | ERR9119647 | MDR-TB | lineage4.1.2.1 | None | ERR9786088 | Sensitive | lineage3 | None | SRR12882034 | HR-TB | lineage3 | None | SRR13180235 | MDR-TB | lineage4.1.2.1 | None | SRR2100869 | MDR-TB | lineage4.1.2.1 | None | SRR21728711 | Sensitive | lineage3 | None | ERR9806867 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR4815218 | HR-TB | lineage3.1.2.1 | gb | SRR3082135 | MDR-TB | lineage4.1.2.1 | None | ERR3148197 | Pre-XDR-TB | lineage4.1.1.3 | mx | ERR4813318 | MDR-TB | lineage4.1.1 | None | ERR2510865 | MDR-TB | lineage4.1.2.1 | it | SRR5067374 | HR-TB | lineage2.2.2;lineage2.2.1 | vn | SRR5073979 | Other | lineage4.4.2 | vn | ERR2510203 | MDR-TB | lineage4.1.1 | pe | ERR2515529 | Sensitive | lineage4.3.2.1 | za | SRR5067651 | HR-TB | lineage1.1.1.1 | vn | ERR270768 | MDR-TB | lineage4.1.2.1 | None | ERR2516975 | MDR-TB | lineage4.1.2.1 | gb | ERR2516547 | MDR-TB | lineage4.1.1 | pe | ERR3148195 | Sensitive | lineage4.4.1.1 | mx | ERR2652996 | MDR-TB | lineage4.3.4.1 | None | ERR4827786 | MDR-TB | lineage4.7 | None | ERR4828499 | Sensitive | lineage1.2.1.2.1 | vn | ERR2843437 | Sensitive | lineage1.2.1.2.1 | None | ERR4828189 | HR-TB | lineage1.1.1.1 | vn | ERR4828300 | Sensitive | lineage1.1.1 | vn | ERR4828507 | Sensitive | lineage1.2.1.2.1 | None | ERR4829495 | Sensitive | lineage4.3.3 | None | ERR4872255 | MDR-TB | lineage4.1.2.1 | None | ERR551272 | Sensitive | lineage4.4.2 | de | ERR3170406 | HR-TB | lineage6.3.1 | gh | ERR3078014 | MDR-TB | lineage4.3.3 | None | ERR3170405 | HR-TB | lineage6.3.1 | gh | ERR3013479 | MDR-TB | lineage4.1.2.1 | tn | SRR6855977 | Sensitive | lineage4.3.2.1 | None | ERR3013480 | MDR-TB | lineage4.1.2.1 | tn | ERR3014581 | MDR-TB | lineage4.1.2.1 | tn | ERR3014607 | Pre-XDR-TB | lineage4.1.2.1 | tn | ERR3014583 | MDR-TB | lineage4.1.2.1 | tn | ERR3014587 | MDR-TB | lineage4.1.2.1 | tn | ERR3014588 | MDR-TB | lineage4.1.2.1 | tn | ERR3014595 | MDR-TB | lineage4.1.2.1 | tn | ERR3014582 | MDR-TB | lineage4.1.2.1 | tn | ERR3014584 | MDR-TB | lineage4.1.2.1 | tn | ERR3014586 | MDR-TB | lineage4.1.2.1 | tn | ERR3014594 | Pre-XDR-TB | lineage4.1.2.1 | tn | ERR3014599 | Pre-XDR-TB | lineage4.1.2.1 | tn | ERR3014612 | MDR-TB | lineage4.1.2.1 | tn | ERR3014604 | MDR-TB | lineage4.1.2.1 | tn | ERR3014609 | MDR-TB | lineage4.1.2.1 | tn | ERR3014605 | Pre-XDR-TB | lineage4.1.2.1 | tn | ERR3014608 | MDR-TB | lineage4.1.2.1 | tn | ERR3014611 | MDR-TB | lineage4.1.2.1 | tn | ERR3014615 | MDR-TB | lineage4.1.2.1 | tn | ERR3014613 | Pre-XDR-TB | lineage4.1.2.1 | tn | ERR3014614 | MDR-TB | lineage4.1.2.1 | tn | ERR3014619 | MDR-TB | lineage4.1.2.1 | tn | ERR3014621 | MDR-TB | lineage4.1.2.1 | tn | ERR3014620 | MDR-TB | lineage4.1.2.1 | tn | ERR3014617 | MDR-TB | lineage4.1.2.1 | tn | ERR3014622 | MDR-TB | lineage4.1.2.1 | tn | ERR3014623 | Pre-XDR-TB | lineage4.1.2.1 | tn | SRR7765063 | Pre-XDR-TB | lineage4.8 | None | ERR3014625 | MDR-TB | lineage4.1.2.1 | tn | ERR1034746 | Sensitive | lineage4.1.2.1 | pe |
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