Rv3919c - p.Arg47Trp
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
24 Sensitive
0 RR-TB
10 HR-TB
109 MDR-TB
11 Pre-XDR-TB
1 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 6 |
| lineage4.1.2.1 | 92 |
| lineage1.1.2 | 7 |
| lineage4.4.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.3 | 3 |
| lineage4.4.2 | 3 |
| lineage4.1.1 | 13 |
| lineage1.1.1.1 | 8 |
| lineage1.2.1.2.1 | 6 |
| lineage4.1.2 | 2 |
| lineage4.1.2.1;lineage4.3.1 | 1 |
| lineage4.3.2.1 | 3 |
| lineage1.1.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage6.3.1 | 2 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.7 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 158 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29096639 | Sensitive | lineage3 | None | ERR3014620 | MDR-TB | lineage4.1.2.1 | tn | SRR29772625 | MDR-TB | lineage1.1.2 | None | ERR9119647 | MDR-TB | lineage4.1.2.1 | None | ERR3013480 | MDR-TB | lineage4.1.2.1 | tn | ERR552196 | MDR-TB | lineage4.1.2.1 | None | ERR550826 | MDR-TB | lineage4.1.2.1 | None | ERR4799000 | MDR-TB | lineage3 | in | ERR3014611 | MDR-TB | lineage4.1.2.1 | tn | ERR3148195 | Sensitive | lineage4.4.1.1 | mx | ERR3148197 | Pre-XDR-TB | lineage4.1.1.3 | mx | ERR3078014 | MDR-TB | lineage4.3.3 | None | SRR27069394 | Pre-XDR-TB | lineage4.4.2 | None | SRR28394250 | MDR-TB | lineage4.1.1 | None | ERR4828189 | HR-TB | lineage1.1.1.1 | vn | ERR4828507 | Sensitive | lineage1.2.1.2.1 | None | ERR7911286 | MDR-TB | lineage1.1.1.1 | vn | ERR751413 | MDR-TB | lineage4.1.1 | pe | ERR144578 | Sensitive | lineage4.1.2 | ru | ERR2510203 | MDR-TB | lineage4.1.1 | pe | ERR1034746 | Sensitive | lineage4.1.2.1 | pe | ERR11552001 | MDR-TB | lineage4.1.2.1 | None | ERR11552005 | MDR-TB | lineage4.1.2.1 | None | ERR3014587 | MDR-TB | lineage4.1.2.1 | tn | ERR552700 | MDR-TB | lineage4.1.2.1 | None | ERR3014617 | MDR-TB | lineage4.1.2.1 | tn | ERR553094 | MDR-TB | lineage4.1.2.1 | None | ERR11551983 | MDR-TB | lineage4.1.2.1;lineage4.3.1 | None | ERR11552249 | MDR-TB | lineage4.1.2.1 | None | ERR11551986 | MDR-TB | lineage4.1.2.1 | None | ERR11552002 | MDR-TB | lineage4.1.2.1 | None | ERR2510865 | MDR-TB | lineage4.1.2.1 | it | ERR2516975 | MDR-TB | lineage4.1.2.1 | gb | ERR11552014 | MDR-TB | lineage4.1.2.1 | None | ERR3014588 | MDR-TB | lineage4.1.2.1 | tn | SRR26400069 | Sensitive | lineage1.1.1.1 | None | SRR29772498 | MDR-TB | lineage1.1.2 | None | ERR553095 | MDR-TB | lineage4.1.2.1 | None | ERR3014608 | MDR-TB | lineage4.1.2.1 | tn | ERR3014623 | Pre-XDR-TB | lineage4.1.2.1 | tn | ERR11551997 | MDR-TB | lineage4.1.2.1 | None | SRR26399569 | HR-TB | lineage1.1.1.1 | None | ERR386971 | MDR-TB | lineage4.1.2.1 | None | ERR2843437 | Sensitive | lineage1.2.1.2.1 | None | ERR9806867 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR3014607 | Pre-XDR-TB | lineage4.1.2.1 | tn | SRR29772838 | MDR-TB | lineage1.1.2 | None | ERR3014599 | Pre-XDR-TB | lineage4.1.2.1 | tn | ERR3014621 | MDR-TB | lineage4.1.2.1 | tn | ERR11552012 | MDR-TB | lineage4.1.2.1 | None | SRR27450516 | Sensitive | lineage1.1.1.1 | None | ERR550654 | MDR-TB | lineage4.1.2.1 | None | ERR11552000 | MDR-TB | lineage4.1.2.1 | None | ERR11551991 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11551993 | MDR-TB | lineage4.1.2.1 | None | ERR4828300 | Sensitive | lineage1.1.1 | vn | SRR28393416 | MDR-TB | lineage4.1.1 | None | ERR3287847 | MDR-TB | lineage4.3.4.2 | pe | ERR751520 | MDR-TB | lineage4.1.1 | pe | ERR751410 | MDR-TB | lineage4.1.1 | pe | ERR3014595 | MDR-TB | lineage4.1.2.1 | tn | ERR11551987 | MDR-TB | lineage4.1.2.1 | None | SRR2100869 | MDR-TB | lineage4.1.2.1 | None | ERR3170405 | HR-TB | lineage6.3.1 | gh | ERR3170406 | HR-TB | lineage6.3.1 | gh | ERR2516547 | MDR-TB | lineage4.1.1 | pe | SRR15014677 | MDR-TB | lineage1.1.2 | None | ERR11552010 | MDR-TB | lineage4.1.2.1 | None | ERR11049512 | MDR-TB | lineage4.1.2.1 | None | ERR6866305 | MDR-TB | lineage4.1.1 | None | SRR5067374 | HR-TB | lineage2.2.1;lineage2.2.2 | vn | ERR11552004 | MDR-TB | lineage4.1.2.1 | None | ERR11551995 | MDR-TB | lineage4.1.2.1 | None | ERR11551990 | MDR-TB | lineage4.1.2.1 | None | ERR11552003 | MDR-TB | lineage4.1.2.1 | None | ERR553315 | MDR-TB | lineage4.1.2.1 | None | SRR5073979 | Other | lineage4.4.2 | vn | SRR26399761 | Sensitive | lineage1.1.1.1 | None | ERR2652996 | MDR-TB | lineage4.3.4.1 | None | ERR11551996 | MDR-TB | lineage4.1.2.1 | None | SRR13870419 | XDR-TB | lineage4.1.1 | None | ERR11552008 | MDR-TB | lineage4.1.2.1 | None | ERR3014581 | MDR-TB | lineage4.1.2.1 | tn | ERR11551992 | MDR-TB | lineage4.1.2.1 | None | ERR11551985 | MDR-TB | lineage4.1.2.1 | None | ERR270768 | MDR-TB | lineage4.1.2.1 | None | ERR11551979 | MDR-TB | lineage4.1.2.1 | None | ERR3256258 | MDR-TB | lineage1.2.1.2.1 | ph | ERR3014594 | Pre-XDR-TB | lineage4.1.2.1 | tn | ERR11551989 | MDR-TB | lineage4.1.2.1 | None | ERR11552007 | MDR-TB | lineage4.1.2.1 | None | ERR553290 | MDR-TB | lineage4.1.2.1 | None | SRR29050997 | Sensitive | lineage1.1.1 | None | SRR29772563 | Pre-XDR-TB | lineage1.1.2 | None | ERR550873 | MDR-TB | lineage4.1.2.1 | None | ERR4872255 | MDR-TB | lineage4.1.2.1 | None | ERR3014613 | Pre-XDR-TB | lineage4.1.2.1 | tn | ERR3014625 | MDR-TB | lineage4.1.2.1 | tn | SRR29051004 | Sensitive | lineage1.2.1.2.1 | None | ERR11552013 | MDR-TB | lineage4.1.2.1 | None | SRR29126359 | Sensitive | lineage4.3.3 | None | ERR11551984 | MDR-TB | lineage4.1.2.1 | None | ERR550827 | MDR-TB | lineage4.1.2.1 | None | ERR11552006 | MDR-TB | lineage4.1.2.1 | None | SRR29126975 | Sensitive | lineage4.1.2 | None | ERR3014609 | MDR-TB | lineage4.1.2.1 | tn | ERR3013479 | MDR-TB | lineage4.1.2.1 | tn | ERR3014582 | MDR-TB | lineage4.1.2.1 | tn | ERR3014622 | MDR-TB | lineage4.1.2.1 | tn | ERR4827786 | MDR-TB | lineage4.7 | None | SRR29440600 | Other | lineage1.2.2.2 | None | ERR11551980 | MDR-TB | lineage4.1.2.1 | None | ERR4813318 | MDR-TB | lineage4.1.1 | None | ERR11551999 | MDR-TB | lineage4.1.2.1 | None | ERR11551982 | MDR-TB | lineage4.1.2.1 | None | ERR4828499 | Sensitive | lineage1.2.1.2.1 | vn | ERR4829495 | Sensitive | lineage4.3.3 | None | ERR3014612 | MDR-TB | lineage4.1.2.1 | tn | ERR3014619 | MDR-TB | lineage4.1.2.1 | tn | ERR550874 | MDR-TB | lineage4.1.2.1 | None | ERR552303 | MDR-TB | lineage4.1.2.1 | None | ERR9786088 | Sensitive | lineage3 | None | ERR551272 | Sensitive | lineage4.4.2 | de | ERR4815218 | HR-TB | lineage3.1.2.1 | gb | SRR3085366 | MDR-TB | lineage4.1.2.1 | None | ERR3014586 | MDR-TB | lineage4.1.2.1 | tn | SRR12882034 | HR-TB | lineage3 | None | SRR13180235 | MDR-TB | lineage4.1.2.1 | None | SRR3082135 | MDR-TB | lineage4.1.2.1 | None | ERR552195 | MDR-TB | lineage4.1.2.1 | None | SRR5067651 | HR-TB | lineage1.1.1.1 | vn | SRR22249435 | Sensitive | lineage3 | None | ERR3014614 | MDR-TB | lineage4.1.2.1 | tn | ERR552792 | MDR-TB | lineage4.1.2.1 | None | SRR28393938 | MDR-TB | lineage4.1.1 | None | SRR28394056 | MDR-TB | lineage4.1.1 | None | ERR6866286 | MDR-TB | lineage4.1.1 | None | ERR2515529 | Sensitive | lineage4.3.2.1 | za | ERR7902768 | Sensitive | lineage1.1.2 | None | ERR7764328 | HR-TB | lineage4.3.4.1 | None | ERR3014615 | MDR-TB | lineage4.1.2.1 | tn | ERR11552011 | MDR-TB | lineage4.1.2.1 | None | ERR11551981 | MDR-TB | lineage4.1.2.1 | None | ERR11551998 | MDR-TB | lineage4.1.2.1 | None | ERR11552009 | MDR-TB | lineage4.1.2.1 | None | SRR21728711 | Other | lineage3 | None | ERR3014583 | MDR-TB | lineage4.1.2.1 | tn | SRR21732773 | Sensitive | lineage1.1.2 | None | ERR11551988 | MDR-TB | lineage4.1.2.1 | None | ERR11551994 | MDR-TB | lineage4.1.2.1 | None | ERR11552015 | MDR-TB | lineage4.1.2.1 | None | SRR29051555 | Sensitive | lineage1.2.1.2.1 | None | SRR6855977 | Sensitive | lineage4.3.2.1 | None | ERR553244 | MDR-TB | lineage4.1.2.1 | None | SRR29051422 | HR-TB | lineage1.1.1.1 | None | ERR3014604 | MDR-TB | lineage4.1.2.1 | tn | ERR3014584 | MDR-TB | lineage4.1.2.1 | tn | SRR7765063 | Pre-XDR-TB | lineage4.8 | None |
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