lineage | Count |
---|---|
lineage3.1.1 | 33 |
lineage3 | 10 |
lineage1.2.1.2.1 | 5 |
lineage3.1.2 | 6 |
lineage1.1.2 | 2 |
lineage4.9 | 4 |
lineage4.3.3 | 3 |
lineage4.6.2.2 | 2 |
lineage3.1.2.1 | 1 |
lineage4.1.2 | 2 |
lineage4.1.2.1 | 1 |
lineage4.4.2 | 2 |
lineage4.2.2.2 | 3 |
lineage4.7 | 1 |
lineage4.8 | 1 |
lineage1.2.2.2 | 1 |
lineage4.3.2 | 1 |
lineage4.3.4.2 | 1 |
spoligotype | Count |
---|---|
None | 79 |
ID | Drug resistance | Lineage | Country iso2 | SRR21690090 | Sensitive | lineage3.1.1 | None | SRR21690636 | Sensitive | lineage3.1.1 | None | ERR3276012 | Sensitive | lineage3.1.1 | nl | ERR3470618 | Sensitive | lineage3 | None | SRR21690780 | Sensitive | lineage3.1.1 | None | SRR21690938 | Sensitive | lineage3.1.1 | None | SRR21690917 | Sensitive | lineage3.1.1 | None | ERR9125726 | Sensitive | lineage1.2.1.2.1 | None | SRR6045984 | MDR-TB | lineage3.1.2 | gb | SRR22179524 | Sensitive | lineage3.1.1 | None | SRR16058314 | HR-TB | lineage1.1.2 | None | SRR1175132 | HR-TB | lineage3 | None | ERR3335741 | Pre-XDR-TB | lineage3 | pk | ERR13290099 | MDR-TB | lineage3.1.2 | None | SRR22179526 | Sensitive | lineage3.1.1 | None | ERR270709 | HR-TB | lineage4.9 | None | ERR9125420 | HR-TB | lineage1.1.2 | None | SRR2100307 | HR-TB | lineage4.9 | None | SRR28394022 | MDR-TB | lineage4.3.3 | None | ERR3275761 | Sensitive | lineage3.1.1 | nl | SRR21690177 | Sensitive | lineage3.1.1 | None | SRR21689484 | Sensitive | lineage3.1.1 | None | ERR13285629 | Sensitive | lineage3.1.1 | None | SRR21675859 | Sensitive | lineage4.6.2.2 | None | ERR3276143 | Sensitive | lineage3.1.1 | nl | SRR22424735 | MDR-TB | lineage3.1.2.1 | None | SRR6045602 | MDR-TB | lineage3.1.2 | None | ERR11082758 | MDR-TB | lineage4.1.2 | None | SRR6045796 | HR-TB | lineage3.1.2 | None | SRR21690943 | Sensitive | lineage3.1.1 | None | SRR6044909 | MDR-TB | lineage3.1.2 | None | ERR4831431 | Pre-XDR-TB | lineage3 | None | SRR21690795 | Sensitive | lineage3.1.1 | None | ERR114458 | HR-TB | lineage4.9 | None | ERR3275704 | Sensitive | lineage3.1.1 | nl | ERR3275770 | Sensitive | lineage3.1.1 | nl | SRR24114363 | Pre-XDR-TB | lineage3 | None | ERR3276049 | Sensitive | lineage3.1.1 | nl | ERR5897083 | Pre-XDR-TB | lineage3 | None | ERR13285535 | Sensitive | lineage3.1.1 | None | SRR29126774 | Sensitive | lineage3 | None | SRR29772826 | MDR-TB | lineage4.1.2.1 | None | DRR130148 | MDR-TB | lineage1.2.1.2.1 | None | ERR3276059 | Sensitive | lineage3.1.1 | nl | SRR2024949 | Pre-XDR-TB | lineage4.4.2 | cn | SRR21690796 | Sensitive | lineage3.1.1 | None | SRR29052769 | Sensitive | lineage4.6.2.2 | None | SRR21689571 | Sensitive | lineage3.1.1 | None | ERR4799106 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR3276159 | Sensitive | lineage3.1.1 | nl | ERR551092 | Other | lineage4.7 | cg | SRR22179537 | Sensitive | lineage3.1.1 | None | ERR3275744 | Sensitive | lineage3.1.1 | nl | SRR2099990 | HR-TB | lineage4.9 | None | ERR2446372 | Sensitive | lineage3.1.1 | nl | ERR6336774 | Sensitive | lineage1.2.1.2.1 | None | SRR4423147 | Pre-XDR-TB | lineage3 | None | SRR2100336 | Sensitive | lineage3 | None | ERR3275737 | Sensitive | lineage3.1.1 | nl | ERR2516492 | Pre-XDR-TB | lineage4.3.3 | pe | SRR21690923 | Sensitive | lineage3.1.1 | None | ERR294226 | HR-TB | lineage4.2.2.2 | None | ERR3287876 | RR-TB | lineage4.8 | pe | SRR21690846 | Sensitive | lineage3.1.1 | None | SRR21685115 | Sensitive | lineage1.2.2.2 | None | SRR2024903 | MDR-TB | lineage4.4.2 | cn | ERR114489 | Sensitive | lineage3 | None | ERR13289583 | MDR-TB | lineage3.1.2 | None | SRR22179529 | Sensitive | lineage3.1.1 | None | SRR24799263 | RR-TB | lineage4.3.2 | None | SRR28394010 | MDR-TB | lineage4.3.3 | None | SRR16058018 | Sensitive | lineage1.2.1.2.1 | None | DRR130216 | MDR-TB | lineage1.2.1.2.1 | None | ERR3275943 | Sensitive | lineage3.1.1 | nl | SRR21690747 | Sensitive | lineage3.1.1 | None | ERR3639728 | MDR-TB | lineage4.1.2 | None | SRR2101024 | HR-TB | lineage4.2.2.2 | None | ERR3275711 | Sensitive | lineage3.1.1 | nl | ERR4812790 | Sensitive | lineage4.3.4.2 | pe |
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