lineage | Count |
---|---|
lineage3 | 21 |
lineage2.2.1 | 13 |
lineage4.1.1.1 | 15 |
lineage4.3.3 | 3 |
lineage4.1.2.1 | 2 |
lineage3.1.2 | 3 |
lineage1.1.1.1 | 1 |
lineage1.2.1.2.1 | 3 |
lineage4.2.1 | 2 |
lineage4.2.1.1 | 2 |
lineage1.1.3.1 | 1 |
lineage4.6 | 2 |
lineage2.2.1;lineage3 | 2 |
lineage1.1.2 | 1 |
lineage3;lineage4.3.4.2 | 1 |
lineage3.1.3 | 1 |
spoligotype | Count |
---|---|
None | 73 |
ID | Drug resistance | Lineage | Country iso2 | ERR2517433 | HR-TB | lineage3 | nl | SRR25827688 | Pre-XDR-TB | lineage3 | None | ERR278541 | Sensitive | lineage3 | None | SRR22175192 | MDR-TB | lineage3 | None | ERR2446119 | HR-TB | lineage3 | nl | ERR550669 | MDR-TB | lineage2.2.1 | None | SRR5818583 | MDR-TB | lineage4.1.1.1 | dj | ERR1035331 | Pre-XDR-TB | lineage4.3.3 | br | ERR2199891 | Sensitive | lineage4.1.2.1 | de | SRR19115686 | Sensitive | lineage4.1.2.1 | None | ERR4798093 | Sensitive | lineage3.1.2 | in | ERR11044028 | MDR-TB | lineage4.1.1.1 | None | ERR551250 | MDR-TB | lineage2.2.1 | None | ERR072062 | Sensitive | lineage3 | None | ERR4796380 | MDR-TB | lineage3 | None | SRR2100928 | Sensitive | lineage3 | None | SRR26400057 | Sensitive | lineage1.1.1.1 | None | SRR5818579 | MDR-TB | lineage4.1.1.1 | dj | ERR386900 | Sensitive | lineage3 | None | ERR4831196 | HR-TB | lineage3 | de | ERR551016_ERR551015 | MDR-TB | lineage2.2.1 | None | ERR3256214 | Sensitive | lineage1.2.1.2.1 | ph | ERR11081752 | MDR-TB | lineage4.2.1 | None | ERR2600598 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR6797768 | Sensitive | lineage1.1.3.1 | None | ERR5865657 | MDR-TB | lineage4.3.3 | None | SAMN02414939 | MDR-TB | lineage4.1.1.1 | se | ERR11044645 | MDR-TB | lineage3 | None | SRR6832453 | HR-TB | lineage4.2.1.1 | None | ERR4797305 | MDR-TB | lineage3 | in | ERR550667 | MDR-TB | lineage2.2.1 | None | ERR551015 | MDR-TB | lineage2.2.1 | None | ERR3275507 | HR-TB | lineage3 | nl | ERR4815469 | Sensitive | lineage4.6 | gb | SRR25827643 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR551633 | Sensitive | lineage4.6 | de | ERR11775983 | MDR-TB | lineage1.2.1.2.1 | None | ERR2510473 | MDR-TB | lineage3 | pk | ERR13290523 | MDR-TB | lineage4.1.1.1 | None | ERR13290525 | MDR-TB | lineage4.1.1.1 | None | DRR474182 | Sensitive | lineage3.1.2 | None | SRR1166926 | MDR-TB | lineage4.1.1.1 | None | ERR2514261 | Other | lineage3 | None | SRR22249378 | HR-TB | lineage1.1.2 | None | ERR4822315 | MDR-TB | lineage4.1.1.1 | de | ERR2510271 | MDR-TB | lineage3 | pk | SRR25827381 | Pre-XDR-TB | lineage3;lineage4.3.4.2 | None | SAMEA2533379 | MDR-TB | lineage2.2.1 | uz | ERR3256213 | Sensitive | lineage1.2.1.2.1 | ph | ERR551250_ERR551251 | MDR-TB | lineage2.2.1 | None | SRR3675384 | HR-TB | lineage4.2.1 | gb | ERR4799592 | Pre-XDR-TB | lineage3 | in | SRR18213844 | Sensitive | lineage3 | None | SRR25827513 | XDR-TB | lineage2.2.1;lineage3 | None | SRR1165557 | MDR-TB | lineage4.1.1.1 | None | ERR5865658 | MDR-TB | lineage4.3.3 | None | ERR551016 | MDR-TB | lineage2.2.1 | None | ERR550668 | MDR-TB | lineage2.2.1 | None | ERR4276904 | MDR-TB | lineage4.1.1.1 | None | SRR1165525 | MDR-TB | lineage4.1.1.1 | None | ERR550668_ERR550667_ERR550669 | MDR-TB | lineage2.2.1 | None | SRR1162886 | MDR-TB | lineage4.1.1.1 | None | ERR551251 | MDR-TB | lineage2.2.1 | None | DRR474188 | Sensitive | lineage3.1.2 | None | SAMEA2533636 | MDR-TB | lineage2.2.1 | uz | ERR4822308 | MDR-TB | lineage4.1.1.1 | de | SRR2100115 | Sensitive | lineage3 | None | ERR4276862 | MDR-TB | lineage4.1.1.1 | None | SRR25827805 | XDR-TB | lineage3.1.3 | None | ERR4797591 | MDR-TB | lineage3 | in | SAMEA2533806 | MDR-TB | lineage2.2.1 | uz | SRR7070461 | Other | lineage3 | None | ERR11044017 | MDR-TB | lineage4.1.1.1 | None |
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