lineage | Count |
---|---|
lineage4.2.2.2 | 288 |
lineage4.1.2.1 | 4 |
lineage1.1.2 | 3 |
lineage4.1 | 4 |
lineage1.1.1 | 2 |
lineage3 | 5 |
lineage1.2.1.2.1 | 3 |
lineage4.3.2 | 1 |
lineage4.1.1.3 | 6 |
lineage4.1.2 | 1 |
lineage2.2.1 | 1 |
lineage4.2.2.2;lineage4.8 | 1 |
lineage1.1.3.1 | 3 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 323 |
ID | Drug resistance | Lineage | Country iso2 | ERR7737947 | MDR-TB | lineage4.2.2.2 | None | ERR11082149 | MDR-TB | lineage4.1.2.1 | None | SRR28044854 | MDR-TB | lineage1.1.2 | None | SRR1166876 | MDR-TB | lineage4.2.2.2 | None | SRR6045932 | MDR-TB | lineage4.2.2.2 | None | ERR13289578 | HR-TB | lineage4.2.2.2 | None | ERR8774364 | MDR-TB | lineage4.1 | None | ERR4830840 | MDR-TB | lineage4.2.2.2 | et | ERR266608 | HR-TB | lineage4.2.2.2 | None | SRR1165372 | MDR-TB | lineage4.2.2.2 | None | SRR1163208 | MDR-TB | lineage4.2.2.2 | None | SRR6045277 | HR-TB | lineage4.2.2.2 | None | ERR11049567 | MDR-TB | lineage4.2.2.2 | None | SRR28044852 | MDR-TB | lineage1.1.2 | None | ERR13290329 | MDR-TB | lineage4.2.2.2 | None | ERR7737724 | MDR-TB | lineage4.2.2.2 | None | ERR7737906 | MDR-TB | lineage4.2.2.2 | None | ERR4830794 | Pre-XDR-TB | lineage4.2.2.2 | et | SRR29126587 | MDR-TB | lineage4.2.2.2 | None | ERR4011953 | MDR-TB | lineage4.2.2.2 | None | SRR2100823 | HR-TB | lineage4.2.2.2 | None | SRR2100925 | MDR-TB | lineage4.2.2.2 | None | SRR18289193 | Other | lineage1.1.1 | None | SRR29096320 | MDR-TB | lineage4.2.2.2 | None | SRR22251581 | Other | lineage3 | None | SRR26937021 | MDR-TB | lineage4.1.2.1 | None | SRR28046113 | Other | lineage3 | None | ERR6336714 | HR-TB | lineage1.2.1.2.1 | None | ERR4830831 | Pre-XDR-TB | lineage4.2.2.2 | et | SRR1146293 | MDR-TB | lineage4.2.2.2 | None | SAMN02414876 | MDR-TB | lineage4.2.2.2 | se | SRR10808670 | Pre-XDR-TB | lineage4.3.2 | None | ERR4011964 | MDR-TB | lineage4.2.2.2 | None | ERR6397171 | MDR-TB | lineage4.2.2.2 | None | ERR11044337 | HR-TB | lineage4.2.2.2 | None | ERR6397154 | MDR-TB | lineage4.2.2.2 | None | ERR4829102 | Pre-XDR-TB | lineage4.2.2.2 | dj | ERR4011965 | MDR-TB | lineage4.2.2.2 | None | ERR552281_ERR552282 | Other | lineage4.1.1.3 | None | ERR4822497 | MDR-TB | lineage4.2.2.2 | de | SRR5818638 | MDR-TB | lineage4.2.2.2 | dj | SRR1162874 | MDR-TB | lineage4.2.2.2 | None | ERR4830813 | MDR-TB | lineage4.2.2.2 | et | ERR7737685 | MDR-TB | lineage4.2.2.2 | None | ERR4829004 | MDR-TB | lineage4.2.2.2 | it | ERR7737864 | MDR-TB | lineage4.2.2.2 | None | ERR4830793 | MDR-TB | lineage4.2.2.2 | et | ERR7737641 | MDR-TB | lineage4.2.2.2 | None | ERR11042995 | MDR-TB | lineage4.2.2.2 | None | SRR7781506 | MDR-TB | lineage4.2.2.2 | None | ERR552411 | Other | lineage4.1.1.3 | None | SRR29093289 | MDR-TB | lineage4.2.2.2 | None | ERR6397213 | MDR-TB | lineage4.2.2.2 | None | ERR13290323 | MDR-TB | lineage4.2.2.2 | None | ERR3275476 | MDR-TB | lineage4.2.2.2 | nl | ERR270713 | HR-TB | lineage4.2.2.2 | None | ERR4828993 | MDR-TB | lineage4.2.2.2 | it | ERR7732707 | MDR-TB | lineage4.2.2.2 | None | ERR7737868 | MDR-TB | lineage4.2.2.2 | None | SRR29096381 | MDR-TB | lineage4.2.2.2 | None | ERR4830809 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR13290476 | MDR-TB | lineage4.2.2.2 | None | ERR4011966 | Pre-XDR-TB | lineage4.2.2.2 | None | SAMN02414874 | MDR-TB | lineage4.2.2.2 | se | SRR6046111 | HR-TB | lineage4.2.2.2 | gb | SRR3142013 | MDR-TB | lineage4.2.2.2 | None | SRR1167061 | MDR-TB | lineage4.2.2.2 | None | ERR13290628 | MDR-TB | lineage4.2.2.2 | None | SRR1165432 | MDR-TB | lineage4.2.2.2 | None | ERR1035155 | MDR-TB | lineage4.2.2.2 | sa | ERR233350 | MDR-TB | lineage4.2.2.2 | et | ERR7737926 | MDR-TB | lineage4.2.2.2 | None | ERR4831209 | HR-TB | lineage4.2.2.2 | de | SRR1167131 | MDR-TB | lineage4.2.2.2 | None | SRR6045244 | MDR-TB | lineage4.2.2.2 | None | ERR11082068 | Other | lineage4.1.2 | None | ERR11043936 | MDR-TB | lineage4.2.2.2 | None | ERR270778 | HR-TB | lineage4.2.2.2 | None | SRR1163014 | MDR-TB | lineage4.2.2.2 | None | SRR6045841 | HR-TB | lineage4.2.2.2 | gb | ERR3275727 | MDR-TB | lineage4.2.2.2 | nl | ERR4830839 | MDR-TB | lineage4.2.2.2 | et | ERR4011969 | MDR-TB | lineage4.2.2.2 | None | SRR1162796 | MDR-TB | lineage4.2.2.2 | None | ERR11044055 | MDR-TB | lineage4.2.2.2 | None | ERR7737817 | MDR-TB | lineage4.2.2.2 | None | SRR1163142 | MDR-TB | lineage4.2.2.2 | None | ERR4011963 | MDR-TB | lineage4.2.2.2 | None | ERR4011951 | MDR-TB | lineage4.2.2.2 | None | ERR7737707 | MDR-TB | lineage4.2.2.2 | None | ERR4830824 | Pre-XDR-TB | lineage4.2.2.2 | et | ERR386897 | MDR-TB | lineage4.2.2.2 | None | ERR403414 | HR-TB | lineage4.2.2.2 | None | SRR1144785 | MDR-TB | lineage4.2.2.2 | None | SRR1144833 | MDR-TB | lineage4.2.2.2 | None | ERR7737856 | MDR-TB | lineage4.2.2.2 | None | ERR13290578 | MDR-TB | lineage4.2.2.2 | None | SAMN02414977 | MDR-TB | lineage4.2.2.2 | se | SRR19612363 | Other | lineage2.2.1 | None | SRR1146330 | MDR-TB | lineage4.2.2.2 | None | SRR10397114 | MDR-TB | lineage4.1 | None | SRR21690946 | MDR-TB | lineage4.2.2.2 | None | SRR29093297 | MDR-TB | lineage4.2.2.2 | None | ERR13290327 | MDR-TB | lineage4.2.2.2 | None | SAMN02414962 | MDR-TB | lineage4.2.2.2 | se | ERR7737680 | MDR-TB | lineage4.2.2.2 | None | ERR7737683 | MDR-TB | lineage4.2.2.2 | None | ERR7737896 | MDR-TB | lineage4.2.2.2 | None | ERR7737777 | MDR-TB | lineage4.2.2.2 | None | ERR7737836 | MDR-TB | lineage4.2.2.2 | None | SRR21674620 | MDR-TB | lineage4.2.2.2 | None | SRR5818577 | MDR-TB | lineage4.2.2.2 | dj | SRR1144760 | MDR-TB | lineage4.2.2.2 | None | ERR13289719 | MDR-TB | lineage4.2.2.2 | None | ERR13290487 | MDR-TB | lineage4.2.2.2 | None | ERR13290474 | MDR-TB | lineage4.2.2.2 | None | SRR29440886 | HR-TB | lineage4.2.2.2 | None | ERR13290581 | MDR-TB | lineage4.2.2.2 | None | ERR2446468 | MDR-TB | lineage4.2.2.2 | nl | ERR11043787 | MDR-TB | lineage4.2.2.2 | None | ERR13290365 | MDR-TB | lineage4.2.2.2 | None | SRR3085331 | MDR-TB | lineage4.2.2.2 | None | ERR11044007 | MDR-TB | lineage4.2.2.2 | None | ERR13290326 | MDR-TB | lineage4.2.2.2 | None | SRR3082073 | MDR-TB | lineage4.2.2.2 | None | ERR4828996 | MDR-TB | lineage4.2.2.2 | None | SRR28868620 | HR-TB | lineage4.2.2.2 | None | SRR29094054 | MDR-TB | lineage4.2.2.2 | None | ERR11069129 | MDR-TB | lineage4.2.2.2 | None | ERR3275847 | MDR-TB | lineage4.2.2.2 | nl | ERR11044335 | HR-TB | lineage4.2.2.2 | None | SRR29093553 | MDR-TB | lineage4.2.2.2 | None | ERR9125144 | HR-TB | lineage1.2.1.2.1 | None | ERR7737739 | MDR-TB | lineage4.2.2.2 | None | ERR4830798 | MDR-TB | lineage4.2.2.2 | et | ERR13290324 | MDR-TB | lineage4.2.2.2 | None | ERR2516944 | MDR-TB | lineage4.2.2.2 | gb | ERR13276333 | MDR-TB | lineage4.2.2.2 | None | ERR11044157 | MDR-TB | lineage4.2.2.2 | None | ERR10680110 | RR-TB | lineage4.1.1.3 | None | ERR4822303 | MDR-TB | lineage4.2.2.2 | de | ERR4830838 | Pre-XDR-TB | lineage4.2.2.2 | et | ERR7737656 | MDR-TB | lineage4.2.2.2 | None | SRR1163201 | MDR-TB | lineage4.2.2.2 | None | ERR114495 | HR-TB | lineage4.2.2.2 | None | ERR11080920 | MDR-TB | lineage4.2.2.2 | None | ERR7737645 | MDR-TB | lineage4.2.2.2 | None | ERR13290627 | MDR-TB | lineage4.2.2.2 | None | ERR11081050 | MDR-TB | lineage4.2.2.2 | None | ERR270707 | HR-TB | lineage4.2.2.2 | None | ERR4830829 | MDR-TB | lineage4.2.2.2 | et | ERR4831178 | HR-TB | lineage4.2.2.2 | de | ERR4828868 | MDR-TB | lineage4.2.2.2 | None | SRR22424850 | Pre-XDR-TB | lineage3 | None | ERR13290328 | MDR-TB | lineage4.2.2.2 | None | SRR2100878 | HR-TB | lineage4.2.2.2 | None | ERR7732708 | MDR-TB | lineage4.2.2.2 | None | ERR7737819 | MDR-TB | lineage4.2.2.2 | None | SRR6964652 | Other | lineage3 | None | ERR4830825 | MDR-TB | lineage4.2.2.2 | et | ERR7737735 | MDR-TB | lineage4.2.2.2 | None | ERR4830782 | MDR-TB | lineage4.2.2.2 | et | SAMN02414930 | MDR-TB | lineage4.2.2.2 | se | SRR1146309 | MDR-TB | lineage4.2.2.2 | None | ERR5865958 | MDR-TB | lineage4.1 | None | SRR1163085 | MDR-TB | lineage4.2.2.2 | None | ERR7737842 | MDR-TB | lineage4.2.2.2 | None | ERR4830792 | MDR-TB | lineage4.2.2.2 | et | SRR5818581 | MDR-TB | lineage4.2.2.2 | dj | SAMEA2534540 | Other | lineage4.1.1.3 | None | ERR7737772 | MDR-TB | lineage4.2.2.2 | None | ERR7737727 | MDR-TB | lineage4.2.2.2 | None | SRR29093311 | MDR-TB | lineage4.2.2.2 | None | ERR7737722 | MDR-TB | lineage4.2.2.2 | None | ERR7737855 | MDR-TB | lineage4.2.2.2 | None | ERR7737919 | MDR-TB | lineage4.2.2.2 | None | ERR7737796 | MDR-TB | lineage4.2.2.2 | None | ERR4830821 | Pre-XDR-TB | lineage4.2.2.2 | et | SRR1162986 | MDR-TB | lineage4.2.2.2 | None | ERR7737858 | MDR-TB | lineage4.2.2.2 | None | ERR7737871 | MDR-TB | lineage4.2.2.2 | None | ERR7737937 | MDR-TB | lineage4.2.2.2 | None | ERR8774365 | MDR-TB | lineage4.1 | None | ERR7737756 | MDR-TB | lineage4.2.2.2 | None | SRR1163123 | MDR-TB | lineage4.2.2.2 | None | ERR11044613 | MDR-TB | lineage4.2.2.2 | None | ERR7737840 | MDR-TB | lineage4.2.2.2 | None | SRR1162968 | MDR-TB | lineage4.2.2.2 | None | ERR1023412 | MDR-TB | lineage4.2.2.2 | None | SRR2469380 | HR-TB | lineage4.2.2.2 | None | ERR13290363 | MDR-TB | lineage4.2.2.2 | None | ERR11081695 | MDR-TB | lineage4.2.2.2 | None | ERR4797319 | MDR-TB | lineage1.1.2 | in | ERR4276870 | MDR-TB | lineage4.2.2.2 | None | ERR2446297 | MDR-TB | lineage4.2.2.2 | nl | ERR4011973 | MDR-TB | lineage4.2.2.2 | None | ERR13284999 | MDR-TB | lineage4.2.2.2 | None | ERR7737670 | MDR-TB | lineage4.2.2.2 | None | ERR1023318 | HR-TB | lineage4.2.2.2 | None | SAMN02414887 | MDR-TB | lineage4.2.2.2 | se | ERR3275385 | MDR-TB | lineage4.2.2.2 | nl | ERR13290629 | MDR-TB | lineage4.2.2.2 | None | ERR2517342 | MDR-TB | lineage4.2.2.2 | nl | ERR13285002 | MDR-TB | lineage4.2.2.2 | None | SRR1162800 | MDR-TB | lineage4.2.2.2 | None | ERR4831240 | MDR-TB | lineage4.2.2.2 | de | ERR4831239 | MDR-TB | lineage4.2.2.2 | None | SRR1510067 | HR-TB | lineage1.2.1.2.1 | None | ERR13276180 | MDR-TB | lineage4.2.2.2 | None | ERR4011962 | MDR-TB | lineage4.2.2.2 | None | SRR1163413 | MDR-TB | lineage4.2.2.2 | None | ERR13290579 | MDR-TB | lineage4.2.2.2 | None | ERR13290580 | MDR-TB | lineage4.2.2.2 | None | ERR13290626 | MDR-TB | lineage4.2.2.2 | None | ERR7737745 | MDR-TB | lineage4.2.2.2 | None | ERR7737784 | MDR-TB | lineage4.2.2.2 | None | ERR4830834 | MDR-TB | lineage4.2.2.2 | None | ERR4011974 | MDR-TB | lineage4.2.2.2 | None | ERR4830826 | HR-TB | lineage4.2.2.2;lineage4.8 | et | ERR7737720 | MDR-TB | lineage4.2.2.2 | None | ERR7737776 | MDR-TB | lineage4.2.2.2 | None | ERR7902629 | Other | lineage1.1.3.1 | None | ERR11082240 | MDR-TB | lineage4.2.2.2 | None | ERR11081528 | MDR-TB | lineage4.2.2.2 | None | SRR22251454 | HR-TB | lineage4.2.2.2 | None | ERR4830789 | Pre-XDR-TB | lineage4.2.2.2 | et | SRR21689464 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR11080972 | Other | lineage4.8 | None | ERR6397151 | MDR-TB | lineage4.2.2.2 | None | SAMN02414896 | MDR-TB | lineage4.2.2.2 | se | ERR2516914 | MDR-TB | lineage4.2.2.2 | gb | SRR3082080 | MDR-TB | lineage4.2.2.2 | None | ERR11067246 | MDR-TB | lineage4.2.2.2 | None | SRR5818595 | MDR-TB | lineage4.2.2.2 | dj | ERR4828989 | MDR-TB | lineage4.2.2.2 | it | SRR21690975 | MDR-TB | lineage4.2.2.2 | None | SRR28868445 | HR-TB | lineage4.2.2.2 | None | ERR1200620 | MDR-TB | lineage4.2.2.2 | et | ERR2516962 | MDR-TB | lineage4.2.2.2 | gb | ERR11044024 | MDR-TB | lineage4.2.2.2 | None | ERR2677447 | MDR-TB | lineage4.2.2.2 | de | ERR13276281 | MDR-TB | lineage4.2.2.2 | None | ERR4828871 | MDR-TB | lineage4.2.2.2 | None | ERR13290322 | MDR-TB | lineage4.2.2.2 | None | ERR1023410 | MDR-TB | lineage4.2.2.2 | None | ERR13290325 | MDR-TB | lineage4.2.2.2 | None | ERR13290475 | MDR-TB | lineage4.2.2.2 | None | SRR3085334 | MDR-TB | lineage4.2.2.2 | None | SRR1166925 | MDR-TB | lineage4.2.2.2 | None | SRR1163128 | MDR-TB | lineage4.2.2.2 | None | SRR29093679 | MDR-TB | lineage4.2.2.2 | None | SRR2100342 | HR-TB | lineage4.2.2.2 | None | ERR4830797 | MDR-TB | lineage4.2.2.2 | et | SRR18213722 | HR-TB | lineage4.2.2.2 | None | ERR13276188 | MDR-TB | lineage4.2.2.2 | None | ERR13285025 | MDR-TB | lineage4.2.2.2 | None | ERR9891993 | Other | lineage1.1.3.1 | None | SRR1146289 | MDR-TB | lineage4.2.2.2 | None | ERR4011952 | MDR-TB | lineage4.2.2.2 | None | ERR7737644 | MDR-TB | lineage4.2.2.2 | None | ERR552282 | Other | lineage4.1.1.3 | None | ERR4830787 | MDR-TB | lineage4.2.2.2 | None | ERR11044060 | MDR-TB | lineage4.2.2.2 | None | SRR5067709 | Other | lineage4.1.2.1 | vn | ERR11082116 | MDR-TB | lineage4.2.2.2 | None | ERR4011954 | MDR-TB | lineage4.2.2.2 | None | ERR2517379 | MDR-TB | lineage4.2.2.2 | nl | ERR11081701 | MDR-TB | lineage4.2.2.2 | None | ERR7737806 | MDR-TB | lineage4.2.2.2 | None | ERR7737882 | MDR-TB | lineage4.2.2.2 | None | ERR7737890 | MDR-TB | lineage4.2.2.2 | None | SRR1163179 | MDR-TB | lineage4.2.2.2 | None | ERR2145520 | MDR-TB | lineage4.2.2.2 | None | ERR4830784 | MDR-TB | lineage4.2.2.2 | et | ERR3639818 | MDR-TB | lineage4.2.2.2 | None | ERR4830796 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR29093272 | MDR-TB | lineage4.2.2.2 | None | ERR13276437 | MDR-TB | lineage4.2.2.2 | None | ERR4011968 | MDR-TB | lineage4.2.2.2 | None | ERR4276911 | MDR-TB | lineage4.2.2.2 | None | SRR1144808 | MDR-TB | lineage4.2.2.2 | None | SRR1144758 | MDR-TB | lineage4.2.2.2 | None | ERR4811453 | Other | lineage1.1.1 | None | ERR7737851 | MDR-TB | lineage4.2.2.2 | None | SRR22251828 | MDR-TB | lineage4.2.2.2 | None | ERR7737647 | MDR-TB | lineage4.2.2.2 | None | ERR3275716 | MDR-TB | lineage4.2.2.2 | nl | ERR11044333 | MDR-TB | lineage4.2.2.2 | None | SRR1163093 | MDR-TB | lineage4.2.2.2 | None | SAMN02414873 | MDR-TB | lineage4.2.2.2 | se | SRR1144784 | MDR-TB | lineage4.2.2.2 | None | ERR2517069 | MDR-TB | lineage4.2.2.2 | gb | ERR7737942 | MDR-TB | lineage4.2.2.2 | None | ERR4830785 | Pre-XDR-TB | lineage4.2.2.2 | et | ERR4831241 | MDR-TB | lineage4.2.2.2 | de | ERR13267694 | Other | lineage1.1.3.1 | None | ERR11069128 | MDR-TB | lineage4.2.2.2 | None | SRR1146320 | MDR-TB | lineage4.2.2.2 | None | ERR7737662 | MDR-TB | lineage4.2.2.2 | None | ERR7737675 | MDR-TB | lineage4.2.2.2 | None | ERR11080856 | MDR-TB | lineage4.2.2.2 | None | ERR278538 | MDR-TB | lineage4.2.2.2 | None | ERR4828843 | MDR-TB | lineage4.2.2.2 | None | ERR7737682 | MDR-TB | lineage4.2.2.2 | None | ERR4011960 | MDR-TB | lineage4.2.2.2 | None | SRR1162879 | MDR-TB | lineage4.2.2.2 | None | ERR4830828 | Pre-XDR-TB | lineage4.2.2.2 | et | SRR1146301 | MDR-TB | lineage4.2.2.2 | None | ERR3287586 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13290477 | MDR-TB | lineage4.2.2.2 | None | ERR13290489 | MDR-TB | lineage4.2.2.2 | None | SRR22251589 | Other | lineage3 | None | ERR11050152 | MDR-TB | lineage4.2.2.2 | None | ERR552281 | Other | lineage4.1.1.3 | None | ERR8975137 | HR-TB | lineage4.2.2.2 | None | SRR1144814 | MDR-TB | lineage4.2.2.2 | None | ERR13290362 | MDR-TB | lineage4.2.2.2 | None | ERR13290488 | MDR-TB | lineage4.2.2.2 | None | ERR13276239 | MDR-TB | lineage4.2.2.2 | None | ERR4830820 | MDR-TB | lineage4.2.2.2 | et | ERR7737847 | MDR-TB | lineage4.2.2.2 | None | ERR6397199 | MDR-TB | lineage4.2.2.2 | None | ERR7737905 | MDR-TB | lineage4.2.2.2 | None |
---|