lineage | Count |
---|---|
lineage2.2.2 | 11 |
lineage4.3.2 | 32 |
lineage3 | 4 |
lineage1.2.1.2.1 | 1 |
lineage4.5 | 4 |
lineage4.6 | 1 |
lineage4.8 | 2 |
lineage4.1.2.1 | 3 |
lineage3.1.2.1 | 2 |
lineage4.4.2 | 1 |
lineage1.1.2 | 1 |
spoligotype | Count |
---|---|
None | 62 |
ID | Drug resistance | Lineage | Country iso2 | SRR21277269 | MDR-TB | lineage2.2.2 | None | ERR4423616 | Pre-XDR-TB | lineage4.3.2 | None | SRR29231732 | MDR-TB | lineage4.3.2 | None | SRR29231742 | MDR-TB | lineage4.3.2 | None | ERR11068052 | Other | lineage3 | None | SRR29231738 | MDR-TB | lineage4.3.2 | None | SRR29231704 | MDR-TB | lineage4.3.2 | None | SRR21727557 | HR-TB | lineage1.2.1.2.1 | None | SRR29231778 | MDR-TB | lineage4.3.2 | None | ERR2706934 | MDR-TB | lineage4.3.2 | cd | ERR2707134 | MDR-TB | lineage4.3.2 | cd | ERR2706997 | MDR-TB | lineage4.3.2 | cd | ERR2706956 | MDR-TB | lineage4.3.2 | cd | ERR2707229 | MDR-TB | lineage4.3.2 | cd | ERR2706976 | MDR-TB | lineage4.3.2 | cd | SRR17856659 | Pre-XDR-TB | lineage3 | None | ERR2179678 | Other | lineage4.5 | cn | SRR1723930 | Other | lineage4.5 | cn | SRR28119830 | MDR-TB | lineage2.2.2 | None | SRR21887709 | Pre-XDR-TB | lineage2.2.2 | None | SRR10305968 | Other | lineage4.5 | None | SRR29231565 | MDR-TB | lineage4.3.2 | None | SRR29231867 | MDR-TB | lineage4.3.2 | None | SRR5535862 | MDR-TB | lineage4.3.2 | None | SRR28239841 | Other | lineage4.6 | None | SRR29231327 | MDR-TB | lineage4.3.2 | None | ERR13266523 | Pre-XDR-TB | lineage4.8 | None | SRR21887683 | Pre-XDR-TB | lineage2.2.2 | None | SRR18911986 | HR-TB | lineage4.1.2.1 | None | SRR10040216 | Pre-XDR-TB | lineage2.2.2 | None | ERR4798729 | HR-TB | lineage3 | in | ERR13292397 | HR-TB | lineage4.1.2.1 | None | ERR2707028 | MDR-TB | lineage4.3.2 | cd | ERR2706958 | MDR-TB | lineage4.3.2 | cd | ERR4815063 | Other | lineage3 | gb | SRR29230994 | MDR-TB | lineage4.3.2 | None | SRR16115868 | HR-TB | lineage4.1.2.1 | None | ERR4800552 | Pre-XDR-TB | lineage3.1.2.1 | in | SRR29231657 | MDR-TB | lineage4.3.2 | None | SRR3724951 | MDR-TB | lineage4.3.2 | cd | SRR18054800 | MDR-TB | lineage2.2.2 | None | ERR9907724 | MDR-TB | lineage4.3.2 | None | SRR25206913 | Pre-XDR-TB | lineage2.2.2 | None | SRR10040363 | MDR-TB | lineage4.4.2 | None | SRR29231697 | MDR-TB | lineage4.3.2 | None | SRR12420434 | MDR-TB | lineage4.5 | None | SRR29231741 | MDR-TB | lineage4.3.2 | None | SRR25207180 | XDR-TB | lineage2.2.2 | None | SRR29231300 | MDR-TB | lineage4.3.2 | None | SRR29914431 | Pre-XDR-TB | lineage2.2.2 | None | SRR7898217 | MDR-TB | lineage1.1.2 | None | ERR13261144 | Pre-XDR-TB | lineage3.1.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR29231733 | MDR-TB | lineage4.3.2 | None | ERR2707046 | MDR-TB | lineage4.3.2 | cd | ERR2707130 | MDR-TB | lineage4.3.2 | cd | ERR2706979 | MDR-TB | lineage4.3.2 | cd | ERR2707189 | MDR-TB | lineage4.3.2 | cd | ERR2707182 | MDR-TB | lineage4.3.2 | cd | ERR2707090 | MDR-TB | lineage4.3.2 | cd | ERR2503543 | Other | lineage4.8 | fi | SRR21277272 | MDR-TB | lineage2.2.2 | None |
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