Rv3919c - p.Leu26Phe
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
23 Sensitive
0 RR-TB
5 HR-TB
66 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2.1 | 42 |
| lineage1.1.3.1 | 7 |
| lineage4.3.4.2 | 1 |
| lineage4.1.2.1 | 34 |
| lineage4.2.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.3.4.1 | 5 |
| lineage4.3.3 | 1 |
| lineage1.1.2 | 1 |
| lineage4.7 | 1 |
| lineage4.8 | 1 |
| lineage3 | 1 |
| lineage1.1.2;lineage2.2.1.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.1.2;lineage4.3.4.2.1 | 1 |
| lineage4.1.1;lineage4.1.2.1;lineage4.3.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 101 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3132272 | MDR-TB | lineage4.3.4.2.1 | None | SRR6797288 | MDR-TB | lineage1.1.3.1 | None | ERR1213850 | MDR-TB | lineage4.3.4.2.1 | rw | ERR2516670 | MDR-TB | lineage4.3.4.2.1 | nl | ERR2516683 | Sensitive | lineage4.3.4.2 | pe | ERR13260345 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9029861 | MDR-TB | lineage4.1.2.1 | None | ERR1213889 | MDR-TB | lineage4.3.4.2.1 | rw | ERR1213888 | MDR-TB | lineage4.3.4.2.1 | rw | ERR1213826 | MDR-TB | lineage4.3.4.2.1 | rw | ERR10465930 | HR-TB | lineage4.2.1 | None | ERR6358781 | MDR-TB | lineage4.3.4.2.1 | None | ERR13289362 | MDR-TB | lineage4.3.2.1 | None | SRR14801719 | Sensitive | lineage4.1.2.1 | None | ERR13258707 | MDR-TB | lineage1.1.3.1 | None | ERR3132132 | MDR-TB | lineage4.3.4.2.1 | None | SRR1166282 | Sensitive | lineage4.1.2.1 | None | SRR14801900 | Sensitive | lineage4.1.2.1 | None | ERR9907756 | MDR-TB | lineage4.3.4.1 | None | SRR14802209 | Sensitive | lineage4.1.2.1 | None | SRR17657965 | MDR-TB | lineage4.3.4.2.1 | None | ERR12115304 | MDR-TB | lineage1.1.3.1 | None | ERR6359042 | MDR-TB | lineage4.3.4.2.1 | None | SRR29094425 | MDR-TB | lineage4.3.3 | None | ERR6359110 | MDR-TB | lineage4.3.4.2.1 | None | SRR25827684 | Pre-XDR-TB | lineage1.1.2 | None | SRR1169055 | Sensitive | lineage4.1.2.1 | None | SRR14801858 | Sensitive | lineage4.1.2.1 | None | ERR6359080 | MDR-TB | lineage4.3.4.2.1 | None | SRR23310814 | Sensitive | lineage4.1.2.1 | None | ERR6358859 | MDR-TB | lineage4.3.4.2.1 | None | SAMN02584673 | Sensitive | lineage4.1.2.1 | md | ERR3287879 | MDR-TB | lineage4.1.2.1 | pe | SRR17657963 | MDR-TB | lineage4.3.4.2.1 | None | ERR4829917 | HR-TB | lineage4.7 | it | SRR17657929 | MDR-TB | lineage4.3.4.2.1 | None | ERR551144 | Other | lineage4.8 | de | ERR040120 | MDR-TB | lineage4.3.4.2.1 | ug | SRR14807530 | Sensitive | lineage4.1.2.1 | None | SRR14807474 | Sensitive | lineage4.1.2.1 | None | SRR17657940 | MDR-TB | lineage4.3.4.2.1 | None | ERR6358936 | MDR-TB | lineage4.3.4.2.1 | None | ERR6358801 | MDR-TB | lineage4.3.4.2.1 | None | ERR6359021 | MDR-TB | lineage4.3.4.2.1 | None | SAMEA5569681 | MDR-TB | lineage4.1.2.1 | None | ERR6358811 | MDR-TB | lineage4.3.4.2.1 | None | SRR7755747 | Sensitive | lineage4.1.2.1 | None | ERR3132275 | MDR-TB | lineage4.3.4.2.1 | None | SRR29096687 | Sensitive | lineage3 | None | SRR7645914 | Sensitive | lineage4.1.2.1 | None | ERR13260510 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR26331646 | MDR-TB | lineage4.3.2.1 | None | ERR6358969 | MDR-TB | lineage4.3.4.2.1 | None | ERR9907681 | MDR-TB | lineage4.3.4.1 | None | ERR6359072 | MDR-TB | lineage4.3.4.2.1 | None | SRR14802195 | Sensitive | lineage4.1.2.1 | None | ERR2124097 | HR-TB | lineage4.3.4.2.1 | None | SRR25827862 | Pre-XDR-TB | lineage1.1.2;lineage2.2.1.1 | None | ERR9907754 | MDR-TB | lineage4.3.4.1 | None | SRR14801319 | Sensitive | lineage4.1.2.1 | None | ERR3132075 | MDR-TB | lineage4.3.4.2.1 | None | ERR6359003 | MDR-TB | lineage4.3.4.2.1 | None | ERR4799606 | MDR-TB | lineage1.2.2.2 | in | ERR6358741 | MDR-TB | lineage4.3.4.2.1 | None | ERR6358921 | MDR-TB | lineage4.3.4.2.1 | None | ERR6358940 | MDR-TB | lineage4.3.4.2.1 | None | ERR9907719 | MDR-TB | lineage4.3.4.1 | None | ERR3287488 | MDR-TB | lineage4.1.2.1 | None | ERR3287874 | MDR-TB | lineage4.1.2.1 | pe | SRR28393575 | MDR-TB | lineage4.1.2.1 | None | ERR779905 | MDR-TB | lineage4.1.2.1 | pe | ERR3132129 | MDR-TB | lineage4.3.4.2.1 | None | ERR6358844 | MDR-TB | lineage4.3.4.2.1 | None | SRR14782049 | Sensitive | lineage4.1.2.1 | None | SRR14801546 | Sensitive | lineage4.1.2.1 | None | ERR6358942 | MDR-TB | lineage4.3.4.2.1 | None | ERR1213890 | MDR-TB | lineage4.3.4.2.1 | rw | ERR11068809 | MDR-TB | lineage4.3.4.2.1 | None | ERR9907670 | MDR-TB | lineage4.3.4.1 | None | SRR14801623 | Sensitive | lineage4.1.2.1 | None | ERR6358987 | MDR-TB | lineage4.3.4.2.1 | None | SRR8758882 | Other | lineage1.1.3.1 | None | ERR3287878 | MDR-TB | lineage4.1.2.1 | pe | ERR3132251 | HR-TB | lineage4.3.4.2.1 | None | ERR3132131 | MDR-TB | lineage4.3.4.2.1 | None | SRR21747038 | MDR-TB | lineage1.1.3.1 | None | SRR28394303 | MDR-TB | lineage4.1.2.1 | None | SRR17657942 | MDR-TB | lineage4.3.4.2.1 | None | SRR28858456 | Other | lineage1.1.3.1 | None | ERR6358816 | MDR-TB | lineage4.3.4.2.1 | None | SRR14801798 | Sensitive | lineage4.1.2.1 | None | SRR7645904 | Sensitive | lineage4.1.2.1 | None | ERR6358707 | MDR-TB | lineage4.3.4.2.1 | None | SRR14782591 | Sensitive | lineage4.1.2.1 | None | SRR17657949 | HR-TB | lineage1.1.2;lineage4.3.4.2.1 | None | ERR13260354 | MDR-TB | lineage4.1.2.1 | None | SRR10379994 | Sensitive | lineage4.1.2.1 | None | ERR6358890 | MDR-TB | lineage4.3.4.2.1 | None | SRR24498058 | MDR-TB | lineage1.1.3.1 | None | ERR751481 | MDR-TB | lineage4.1.2.1 | pe | SRR28393663 | MDR-TB | lineage4.1.1;lineage4.1.2.1;lineage4.3.4.2 | None |
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