Rv3919c - p.Leu90Arg
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
3 Sensitive
1 RR-TB
18 HR-TB
87 MDR-TB
40 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 115 |
| lineage4.1.2.1 | 4 |
| lineage3.1.1 | 4 |
| lineage2.2.1 | 9 |
| lineage3 | 6 |
| lineage4.3.4.2.1 | 3 |
| lineage3.1.1;lineage4.6.3 | 2 |
| lineage2.1 | 1 |
| lineage4.1.1.3;lineage4.3.4.2 | 3 |
| lineage4.3.3 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1.1.3;lineage4.1.2.1 | 1 |
| lineage2.2.1;lineage4.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 151 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR12118032 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR28393443 | MDR-TB | lineage4.1.1.3 | None | SRR28393545 | MDR-TB | lineage4.1.1.3 | None | SRR28394046 | MDR-TB | lineage4.1.1.3 | None | ERR12118030 | MDR-TB | lineage4.1.1.3 | None | ERR12118060 | MDR-TB | lineage4.1.1.3 | None | ERR3287331 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR3287495 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR6865574 | Other | lineage4.1.2.1 | None | SRR19276644 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13261955 | MDR-TB | lineage4.1.1.3 | None | SRR29096357 | MDR-TB | lineage3.1.1 | None | SRR11972376 | MDR-TB | lineage2.2.1 | None | SRR29053129 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR3287844 | MDR-TB | lineage4.1.1.3 | pe | ERR7737741 | MDR-TB | lineage3.1.1 | None | ERR4799908 | Pre-XDR-TB | lineage3 | in | SRR21732509 | HR-TB | lineage2.2.1 | None | ERR4025013 | HR-TB | lineage4.1.1.3 | None | ERR4815303 | MDR-TB | lineage3.1.1 | gb | SRR28394176 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR28394225 | MDR-TB | lineage4.1.1.3 | None | ERR4812228 | MDR-TB | lineage4.1.1.3 | pe | SRR16370418 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4813213 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR4024920 | MDR-TB | lineage4.1.1.3 | None | ERR3287667 | HR-TB | lineage4.1.1.3 | pe | ERR4812375 | MDR-TB | lineage4.1.1.3 | pe | SRR22461609 | HR-TB | lineage4.1.1.3 | None | SRR28393426 | MDR-TB | lineage4.1.1.3 | None | ERR3287848 | MDR-TB | lineage4.1.1.3 | pe | SRR28394237 | MDR-TB | lineage4.1.1.3 | None | SRR22461584 | MDR-TB | lineage4.1.1.3 | None | ERR4812697 | HR-TB | lineage4.1.1.3 | pe | ERR4812714 | MDR-TB | lineage4.1.1.3 | pe | ERR3287814 | MDR-TB | lineage4.1.1.3 | pe | ERR3287883 | MDR-TB | lineage4.1.1.3 | pe | ERR7911375 | MDR-TB | lineage4.1.1.3 | pe | ERR4831446 | Pre-XDR-TB | lineage3 | None | ERR4812297 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4813459 | MDR-TB | lineage4.1.1.3 | pe | ERR4813174 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR751407 | HR-TB | lineage4.1.1.3 | pe | ERR4813316 | MDR-TB | lineage4.1.1.3 | None | ERR751625 | MDR-TB | lineage4.1.1.3 | pe | SRR28393884 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4817095 | MDR-TB | lineage4.3.4.2.1 | gb | ERR12118065 | MDR-TB | lineage4.1.1.3 | None | SRR29096312 | MDR-TB | lineage3.1.1;lineage4.6.3 | None | ERR1034714 | MDR-TB | lineage4.1.1.3 | pe | SRR30182407 | MDR-TB | lineage4.1.1.3 | None | ERR6866036 | MDR-TB | lineage4.1.1.3 | None | ERR2517371 | MDR-TB | lineage3.1.1 | nl | ERR4813219 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR11972158 | HR-TB | lineage2.2.1 | None | ERR8774289 | MDR-TB | lineage4.1.1.3 | None | SRR29097081 | Sensitive | lineage3 | None | ERR6879016 | MDR-TB | lineage4.1.1.3 | None | ERR4024838 | MDR-TB | lineage4.1.1.3 | None | ERR4813699 | MDR-TB | lineage4.1.1.3 | None | SRR29096175 | Sensitive | lineage3 | None | SRR28393391 | MDR-TB | lineage4.1.1.3 | None | SRR28393619 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR11662677 | Pre-XDR-TB | lineage2.1 | None | ERR12117928 | MDR-TB | lineage4.1.1.3 | None | SRR28393381 | MDR-TB | lineage4.1.1.3 | None | ERR13260623 | MDR-TB | lineage4.1.1.3 | None | ERR4423646 | MDR-TB | lineage4.1.1.3 | None | ERR13260381 | MDR-TB | lineage4.1.1.3 | None | ERR13260664 | MDR-TB | lineage4.1.1.3 | None | SRR6964587 | MDR-TB | lineage3 | None | ERR4024969 | MDR-TB | lineage4.1.1.3 | None | ERR3287857 | Pre-XDR-TB | lineage4.1.1.3;lineage4.3.4.2 | None | SRR29230756 | Sensitive | lineage4.1.2.1 | None | SRR28240134 | HR-TB | lineage4.1.2.1 | None | ERR3287867 | Pre-XDR-TB | lineage4.1.1.3 | pe | SRR28393382 | MDR-TB | lineage4.1.1.3 | None | SRR28393792 | MDR-TB | lineage4.1.1.3 | None | SRR28393392 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4813052 | MDR-TB | lineage4.1.1.3 | None | ERR4813576 | RR-TB | lineage4.3.3 | None | SRR11972332 | HR-TB | lineage2.2.1 | None | ERR775379 | Pre-XDR-TB | lineage4.1.1.3 | pe | SAMEA5570051 | Pre-XDR-TB | lineage4.1.1.3;lineage4.3.4.2 | None | ERR3287415 | MDR-TB | lineage4.1.1.3 | pe | ERR3287863 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR3287656 | MDR-TB | lineage4.1.1.3 | pe | ERR3287383 | MDR-TB | lineage4.1.1.3 | pe | SRR11972275 | MDR-TB | lineage2.2.1 | None | ERR9029872 | Pre-XDR-TB | lineage4.1.1.3;lineage4.3.4.2 | None | ERR4813094 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4011933 | MDR-TB | lineage3.1.1;lineage4.6.3 | None | SRR11972399 | MDR-TB | lineage2.2.1 | None | ERR7911344 | MDR-TB | lineage4.1.1.3 | pe | ERR4025014 | Other | lineage4.1.2.1 | None | SRR29772465 | Pre-XDR-TB | lineage1.1.2 | None | ERR6865391 | HR-TB | lineage4.1.1.3 | None | SRR26159049 | HR-TB | lineage2.2.1 | None | SRR29093953 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358999 | MDR-TB | lineage4.3.4.2.1 | None | SRR13870395 | MDR-TB | lineage4.1.1.3 | None | SRR22461603 | HR-TB | lineage4.1.1.3 | None | ERR13261647 | MDR-TB | lineage4.1.1.3 | None | SRR13870362 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2510450 | MDR-TB | lineage3 | pk | ERR6865369 | MDR-TB | lineage4.1.1.3 | None | ERR3287516 | MDR-TB | lineage4.1.1.3 | pe | ERR3287575 | HR-TB | lineage4.1.1.3 | pe | ERR3287601 | MDR-TB | lineage4.1.1.3 | pe | ERR12117978 | MDR-TB | lineage4.1.1.3 | None | ERR3287356 | MDR-TB | lineage4.1.1.3 | pe | ERR3287387 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR3287446 | HR-TB | lineage4.1.1.3 | pe | SRR28394219 | MDR-TB | lineage4.1.1.3;lineage4.1.2.1 | None | ERR4813420 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR11775955 | MDR-TB | lineage2.2.1;lineage4.2.1.1 | None | ERR751584 | MDR-TB | lineage4.1.1.3 | pe | ERR4813453 | MDR-TB | lineage4.1.1.3 | pe | SRR22461702 | MDR-TB | lineage4.1.1.3 | None | SRR28393708 | HR-TB | lineage4.1.1.3 | None | ERR4813507 | MDR-TB | lineage4.1.1.3 | pe | ERR7910867 | MDR-TB | lineage4.1.1.3 | pe | ERR4812817 | MDR-TB | lineage4.1.1.3 | None | SRR28393654 | MDR-TB | lineage4.1.1.3 | None | ERR751510 | MDR-TB | lineage4.1.1.3 | pe | ERR4813199 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR751392 | MDR-TB | lineage4.1.1.3 | pe | ERR4813336 | MDR-TB | lineage4.1.1.3 | None | ERR751404 | MDR-TB | lineage4.1.1.3 | pe | ERR751634 | MDR-TB | lineage4.1.1.3 | pe | ERR751502 | MDR-TB | lineage4.1.1.3 | pe | ERR751493 | HR-TB | lineage4.1.1.3 | pe | ERR4812775 | HR-TB | lineage4.1.1.3 | pe | ERR751470 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR775385 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR779896 | MDR-TB | lineage4.1.1.3 | pe | ERR779881 | HR-TB | lineage4.1.1.3 | pe | ERR751627 | MDR-TB | lineage4.1.1.3 | pe | ERR751539 | MDR-TB | lineage4.1.1.3 | pe | ERR2516417 | MDR-TB | lineage4.3.4.2.1 | nl | ERR2516605 | MDR-TB | lineage4.1.1.3 | pe | ERR2516625 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR2516728 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR2516664 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR2516525 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR2516573 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR2516709 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR2516663 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR2516543 | MDR-TB | lineage4.1.1.3 | pe | SRR29093944 | Pre-XDR-TB | lineage2.2.1 | None | ERR6865371 | MDR-TB | lineage4.1.1.3 | None |
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