lineage | Count |
---|---|
lineage1.1.1.1 | 2 |
lineage4.3.4.2 | 2 |
lineage2.2.2 | 3 |
lineage4.8 | 8 |
lineage4.6.1.2 | 30 |
lineage4.3.4.1 | 1 |
lineage3 | 3 |
lineage4.1.2.1 | 1 |
lineage3.1.1 | 3 |
lineage1.2.1.2.1 | 2 |
lineage4.3.3 | 1 |
lineage1.1.2 | 2 |
spoligotype | Count |
---|---|
None | 58 |
ID | Drug resistance | Lineage | Country iso2 | SRR21732311 | HR-TB | lineage1.1.1.1 | None | SRR29016968 | Sensitive | lineage4.3.4.2 | None | SRR26399717 | Sensitive | lineage1.1.1.1 | None | SRR24112526 | MDR-TB | lineage2.2.2 | None | ERR13284804 | MDR-TB | lineage4.8 | None | ERR2707057 | MDR-TB | lineage4.6.1.2 | cd | SRR24112528 | RR-TB | lineage2.2.2 | None | ERR552921_ERR552922 | Sensitive | lineage4.8 | None | ERR11043051 | MDR-TB | lineage4.3.4.1 | None | SRR24112527 | MDR-TB | lineage2.2.2 | None | SRR29230786 | MDR-TB | lineage4.6.1.2 | None | ERR4553488 | HR-TB | lineage4.8 | None | ERR228189 | Sensitive | lineage3 | None | ERR3014592 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR2041761 | MDR-TB | lineage4.1.2.1 | rs | ERR2707070 | MDR-TB | lineage4.6.1.2 | cd | ERR1654693 | MDR-TB | lineage4.6.1.2 | None | ERR2707026 | MDR-TB | lineage4.6.1.2 | cd | ERR1654674 | MDR-TB | lineage4.6.1.2 | None | SRR21689755 | Sensitive | lineage3.1.1 | None | ERR2707012 | MDR-TB | lineage4.6.1.2 | cd | ERR2707024 | MDR-TB | lineage4.6.1.2 | cd | ERR11081993 | MDR-TB | lineage4.8 | None | SRR29231685 | MDR-TB | lineage4.6.1.2 | None | SRR29231653 | MDR-TB | lineage4.6.1.2 | None | ERR2512657 | Sensitive | lineage3.1.1 | gb | SRR29231815 | MDR-TB | lineage4.6.1.2 | None | SRR2100546 | Sensitive | lineage3 | None | ERR552921 | Sensitive | lineage4.8 | None | SRR18213783 | Sensitive | lineage3 | None | ERR1199096 | MDR-TB | lineage4.6.1.2 | cd | ERR2706925 | MDR-TB | lineage4.6.1.2 | cd | ERR1654669 | MDR-TB | lineage4.6.1.2 | None | ERR1199105 | MDR-TB | lineage4.6.1.2 | cd | SRR29230780 | MDR-TB | lineage4.6.1.2 | None | ERR552922 | Sensitive | lineage4.8 | None | SRR29231826 | MDR-TB | lineage4.6.1.2 | None | SRR29231679 | MDR-TB | lineage4.6.1.2 | None | SRR23316630 | HR-TB | lineage1.2.1.2.1 | None | ERR1199113 | MDR-TB | lineage4.6.1.2 | cd | ERR2707123 | MDR-TB | lineage4.6.1.2 | cd | ERR13260045 | MDR-TB | lineage4.3.4.2 | None | ERR2706990 | MDR-TB | lineage4.6.1.2 | cd | SRR29231795 | MDR-TB | lineage4.6.1.2 | None | ERR1654664 | MDR-TB | lineage4.6.1.2 | None | ERR6866830 | Sensitive | lineage4.3.3 | None | SRR28045865 | HR-TB | lineage1.1.2 | None | SRR29231840 | MDR-TB | lineage4.6.1.2 | None | SRR7068904 | Sensitive | lineage3.1.1 | None | ERR2707020 | MDR-TB | lineage4.6.1.2 | cd | SRR29016813 | MDR-TB | lineage4.8 | None | SRR6153088 | Sensitive | lineage1.2.1.2.1 | ca | ERR2706919 | MDR-TB | lineage4.6.1.2 | cd | SRR29231001 | MDR-TB | lineage4.6.1.2 | None | SRR15014657 | MDR-TB | lineage1.1.2 | None | SAMEA2535001 | Sensitive | lineage4.8 | None | ERR2707132 | MDR-TB | lineage4.6.1.2 | cd | SRR29231844 | MDR-TB | lineage4.6.1.2 | None |
---|