lineage | Count |
---|---|
lineage2.2.1 | 2 |
lineage4.1.2.1 | 3 |
lineage1.2.2 | 7 |
lineage4.3.3 | 24 |
lineage3 | 7 |
lineage1.1.2 | 2 |
lineage2.2.1;lineage4.8 | 1 |
lineage3.1.2.1 | 3 |
lineage1.1.1 | 1 |
lineage4.8 | 4 |
lineage1.1.1.1 | 6 |
lineage1.2.1.2 | 2 |
lineage4.2.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage1.2.1.2.1 | 4 |
lineage4.3.4.2 | 1 |
spoligotype | Count |
---|---|
None | 69 |
ID | Drug resistance | Lineage | Country iso2 | SRR29289133 | XDR-TB | lineage2.2.1 | None | ERR2513305 | Sensitive | lineage4.1.2.1 | gb | SRR22249546 | Sensitive | lineage1.2.2 | None | ERR1193902 | MDR-TB | lineage4.3.3 | tm | ERR4797756 | XDR-TB | lineage3 | in | SRR10808478 | Sensitive | lineage4.3.3 | None | ERR5866042 | MDR-TB | lineage4.3.3 | None | ERR4797181 | XDR-TB | lineage3 | in | ERR11775916 | Sensitive | lineage1.1.2 | None | ERR4799370 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | None | ERR5979417 | Pre-XDR-TB | lineage3 | None | ERR4797200 | MDR-TB | lineage3.1.2.1 | in | SRR5073848 | HR-TB | lineage1.1.1 | vn | ERR552611_ERR552610 | MDR-TB | lineage4.3.3 | None | ERR5866043 | MDR-TB | lineage4.3.3 | None | SRR16088410 | MDR-TB | lineage4.3.3 | None | ERR13266998 | Sensitive | lineage1.2.2 | None | ERR5917734 | MDR-TB | lineage4.3.3 | by | ERR11043441 | MDR-TB | lineage4.3.3 | None | ERR13284164 | Pre-XDR-TB | lineage3 | None | ERR11050923 | Sensitive | lineage4.8 | None | ERR11082809 | MDR-TB | lineage1.1.1.1 | None | ERR9119421 | Sensitive | lineage1.1.1.1 | None | ERR9125825 | HR-TB | lineage1.2.1.2 | None | SRR28239947 | HR-TB | lineage4.2.1 | None | SRR29053089 | HR-TB | lineage1.2.2 | None | SRR16057944 | HR-TB | lineage1.2.1.2 | None | ERR3148178 | MDR-TB | lineage4.3.3 | mx | ERR2510358 | MDR-TB | lineage2.2.1 | pk | ERR13284380 | MDR-TB | lineage4.3.3 | None | ERR4830446 | Sensitive | lineage1.1.1.1 | vn | SRR15014773 | MDR-TB | lineage1.1.2 | None | ERR3639700 | Pre-XDR-TB | lineage4.3.3 | None | SRR6045986 | Other | lineage3 | None | ERR552003 | Pre-XDR-TB | lineage4.3.3 | None | SAMEA2534766 | MDR-TB | lineage4.3.3 | uz | ERR10762265 | Pre-XDR-TB | lineage4.3.3 | None | ERR5918134 | HR-TB | lineage4.3.4.2.1 | za | ERR3639800 | Pre-XDR-TB | lineage3 | None | SRR26399523 | Sensitive | lineage1.1.1.1 | None | ERR1193862 | Pre-XDR-TB | lineage4.3.3 | us | SRR18913753 | Sensitive | lineage1.2.2 | None | ERR4817039 | Other | lineage4.1.2.1 | gb | SRR15014621 | RR-TB | lineage1.2.2 | None | ERR5866041 | MDR-TB | lineage4.3.3 | None | ERR4796736 | Sensitive | lineage3.1.2.1 | in | ERR2184298 | Sensitive | lineage4.3.3 | pe | SRR18714802 | Sensitive | lineage4.8 | None | ERR4816117 | Sensitive | lineage1.2.2 | None | SRR19324971 | Sensitive | lineage1.2.1.2.1 | None | ERR3275792 | HR-TB | lineage1.2.1.2.1 | nl | SRR29772428 | MDR-TB | lineage1.2.2 | None | ERR552610 | MDR-TB | lineage4.3.3 | None | SRR5073511 | Sensitive | lineage1.1.1.1 | vn | SRR7496530 | HR-TB | lineage1.2.1.2.1 | us | ERR13284204 | Pre-XDR-TB | lineage4.3.3 | None | ERR13284983 | MDR-TB | lineage1.1.1.1 | None | ERR9030450 | MDR-TB | lineage4.8 | None | ERR4796927 | Pre-XDR-TB | lineage4.3.4.2 | in | SRR22249396 | Sensitive | lineage3.1.2.1 | None | SRR21690141 | HR-TB | lineage1.2.1.2.1 | None | SRR28888051 | XDR-TB | lineage4.3.3 | None | ERR2184526 | Sensitive | lineage4.3.3 | pe | SRR10808340 | Sensitive | lineage4.3.3 | None | ERR9030413 | MDR-TB | lineage4.8 | None | ERR552611 | MDR-TB | lineage4.3.3 | None | ERR4797661 | XDR-TB | lineage3 | in | ERR10762434 | MDR-TB | lineage4.3.3 | None | ERR4798231 | HR-TB | lineage4.1.2.1 | in |
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