lineage | Count |
---|---|
lineage4.2.2.2 | 1 |
lineage4;lineage3;lineage2.2.1;lineage1 | 1 |
lineage4.8;lineage3.1.2;lineage2.2.1;lineage1.1.2 | 1 |
lineage4.8 | 16 |
lineage2.2.2 | 1 |
lineage4.1.2 | 1 |
lineage3.1.2;lineage2.2.1 | 1 |
lineage1.1.1.1 | 2 |
1 | |
lineage1.1.1 | 3 |
lineage2.1 | 1 |
lineage3 | 3 |
lineage4.2.1 | 1 |
lineage4.3.3 | 1 |
lineage1.2.2.2 | 1 |
lineage1.1.2 | 3 |
lineage4.1.2.1 | 2 |
lineage1.1.3.1 | 1 |
lineage4.1.1 | 1 |
lineage1.2.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 43 |
ID | Drug resistance | Lineage | Country iso2 | ERR11081118 | HR-TB | lineage4.2.2.2 | None | SRR25827484 | Pre-XDR-TB | lineage4;lineage3;lineage2.2.1;lineage1 | None | SRR25827345 | XDR-TB | lineage4.8;lineage3.1.2;lineage2.2.1;lineage1.1.2 | None | SRR27107246 | Pre-XDR-TB | lineage4.8 | None | ERR11081703 | Other | lineage4.8 | None | SRR27107274 | Pre-XDR-TB | lineage4.8 | None | SRR22251534 | HR-TB | lineage2.2.2 | None | SRR27107289 | MDR-TB | lineage4.8 | None | SRR4035801 | Other | lineage4.1.2 | None | SRR25827702 | MDR-TB | lineage3.1.2;lineage2.2.1 | None | SRR28239742 | MDR-TB | lineage4.8 | None | SRR6339663 | MDR-TB | lineage1.1.1.1 | None | ERR4814914 | HR-TB | None | SRR24083601 | Other | lineage1.1.1 | None | SRR5065283 | Other | lineage2.1 | vn | ERR7911293 | Other | lineage1.1.1 | vn | SRR5073753 | Other | lineage1.1.1 | vn | ERR7911411 | MDR-TB | lineage4.8 | us | ERR4821909 | Other | lineage3 | None | ERR1465902 | HR-TB | lineage4.8 | ma | ERR4828715 | HR-TB | lineage1.1.1.1 | None | ERR3335793 | MDR-TB | lineage4.2.1 | pk | ERR4800261 | Other | lineage3 | in | ERR4822577 | HR-TB | lineage4.3.3 | tm | ERR4799441 | Other | lineage3 | in | ERR4814633 | Other | lineage1.2.2.2 | gb | ERR4800489 | Other | lineage1.1.2 | in | ERR4816467 | Other | lineage1.1.2 | gb | ERR3287830 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR6797303 | HR-TB | lineage1.1.3.1 | None | SRR27107291 | MDR-TB | lineage4.8 | None | ERR10680091 | MDR-TB | lineage4.1.1 | None | ERR5864450 | MDR-TB | lineage4.8 | None | ERR5864449 | MDR-TB | lineage4.8 | None | SRR27107250 | MDR-TB | lineage4.8 | None | SRR27107260 | MDR-TB | lineage4.8 | None | SRR27107266 | MDR-TB | lineage4.8 | None | ERR5864447 | MDR-TB | lineage4.8 | None | ERR5864451 | MDR-TB | lineage4.8 | None | ERR5864448 | MDR-TB | lineage4.8 | None | SRR11348196 | HR-TB | lineage1.1.2 | None | SRR20958084 | Other | lineage4.1.2.1 | None | SRR22249982 | Other | lineage1.2.1.2.1 | None |
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