Rv3919c - p.Val77Ala
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
23 Sensitive
5 RR-TB
9 HR-TB
32 MDR-TB
28 Pre-XDR-TB
1 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 4 |
| lineage4.4.1.1 | 9 |
| lineage4.2.1.1 | 6 |
| lineage4.2.1 | 7 |
| lineage3 | 5 |
| lineage2.2.2 | 10 |
| lineage4.1.2.1 | 13 |
| lineage4 | 1 |
| lineage2.2.1 | 8 |
| lineage4.3.4.2 | 3 |
| lineage4.8 | 4 |
| lineage1.2.1.2.1 | 2 |
| lineage1.1.3.1 | 3 |
| lineage1.2.2.2 | 3 |
| lineage4.3.3 | 4 |
| lineage5.1.4 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.3.2 | 3 |
| lineage4.1.2 | 3 |
| lineage4.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 2 |
| lineage4.6.2.2 | 1 |
| lineage2.2.1;lineage4.1.1.3;lineage4.3.2.1 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 100 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR15014734 | MDR-TB | lineage1.1.2 | None | ERR228247 | RR-TB | lineage4.4.1.1 | None | SRR6832685 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR13284625 | MDR-TB | lineage4.2.1 | None | SRR28046026 | Other | lineage3 | None | ERR4024699 | Sensitive | lineage4.4.1.1 | None | SRR21732535 | Sensitive | lineage2.2.2 | None | SRR21798494 | HR-TB | lineage4.1.2.1 | None | ERR7975647 | MDR-TB | lineage4.1.2.1 | None | ERR13260341 | MDR-TB | lineage4 | None | ERR13284493 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR18213708 | RR-TB | lineage4.4.1.1 | None | ERR552738_ERR552739 | MDR-TB | lineage4.2.1 | None | ERR552739 | MDR-TB | lineage4.2.1 | None | SRR1013638 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393345 | MDR-TB | lineage4.3.4.2 | None | ERR2510453 | Pre-XDR-TB | lineage4.8 | pk | SRR10500315 | Pre-XDR-TB | lineage1.1.2 | None | ERR7975632 | MDR-TB | lineage4.1.2.1 | None | ERR6866056 | Sensitive | lineage4.4.1.1 | None | SAMN02360598 | Pre-XDR-TB | lineage2.2.1 | kr | SRR1049032 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811544 | HR-TB | lineage2.2.2 | cn | SRR28240219 | HR-TB | lineage4.2.1.1 | None | SRR6152693 | Sensitive | lineage1.2.1.2.1 | ca | SRR28393661 | MDR-TB | lineage4.3.4.2 | None | SRR6797394 | Sensitive | lineage1.1.3.1 | None | ERR4828646 | Sensitive | lineage2.2.2 | vn | ERR4024947 | Sensitive | lineage4.1.2.1 | None | SRR1172710 | Sensitive | lineage1.2.2.2 | None | ERR11043901 | MDR-TB | lineage4.3.3 | None | SAMEA2534864 | MDR-TB | lineage4.2.1 | uz | SRR2100895 | RR-TB | lineage4.4.1.1 | None | ERR2510708 | MDR-TB | lineage5.1.4 | it | ERR2512813 | Sensitive | lineage3 | gb | ERR1035102 | Pre-XDR-TB | lineage2.2.1 | vn | SRR6797425 | Sensitive | lineage1.1.3.1 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR21732641 | Sensitive | lineage2.2.2 | None | ERR270797 | RR-TB | lineage4.4.1.1 | None | SRR6832046 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR4972562 | MDR-TB | lineage4.3.2 | None | ERR7975679 | MDR-TB | lineage4.1.2.1 | None | SRR29051062 | Sensitive | lineage2.2.2 | None | ERR6865903 | HR-TB | lineage4.3.2 | None | ERR13261694 | MDR-TB | lineage4.3.3 | None | ERR11043480 | MDR-TB | lineage4.2.1 | None | SRR15217985 | MDR-TB | lineage4.1.2 | None | SRR18665454 | Sensitive | lineage4.1.1 | None | ERR6865540 | Sensitive | lineage4.1.2.1 | None | ERR11043498 | MDR-TB | lineage4.2.1 | None | SAMN02599068 | Sensitive | lineage1.2.2.2 | None | ERR13284710 | MDR-TB | lineage4.3.3 | None | ERR987778 | MDR-TB | lineage4.3.4.2 | None | ERR11043899 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR7975633 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1144766 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798864 | Sensitive | lineage3 | in | SRR1175096 | Sensitive | lineage1.2.2.2 | None | SRR28858644 | Sensitive | lineage3 | None | SRR1013658 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013659 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360608 | Pre-XDR-TB | lineage2.2.2 | kr | ERR4813434 | HR-TB | lineage4.3.4 | pe | ERR4831464 | Pre-XDR-TB | lineage1.1.2 | None | ERR4024681 | Sensitive | lineage4.8 | None | ERR2514565 | Sensitive | lineage3.1.2.1 | gb | SRR7655983 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR13261620 | XDR-TB | lineage4.1.2 | None | ERR7975685 | MDR-TB | lineage4.1.2.1 | None | ERR7975637 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR16087995 | HR-TB | lineage4.2.1.1 | None | ERR4024803 | HR-TB | lineage4.3.2 | None | SRR28045513 | Sensitive | lineage1.1.2 | None | SRR28393665 | MDR-TB | lineage4.1.2 | None | SRR29017584 | MDR-TB | lineage1.1.3.1 | None | ERR6865732 | Sensitive | lineage4.8 | None | ERR13261660 | MDR-TB | lineage4.3.3 | None | SRR1049033 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303905 | Sensitive | lineage4.8 | None | ERR7975635 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR552738 | MDR-TB | lineage4.2.1 | None | ERR1203075 | HR-TB | lineage4.6.2.2 | None | ERR2653126 | MDR-TB | lineage4.4.1.1 | None | ERR7975658 | MDR-TB | lineage4.1.2.1 | None | SRR28351540 | Pre-XDR-TB | lineage3 | None | ERR10748563 | MDR-TB | lineage2.2.1;lineage4.1.1.3;lineage4.3.2.1 | None | SAMN02398714 | Pre-XDR-TB | lineage2.2.1 | kr | SRR1049054 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049055 | Pre-XDR-TB | lineage2.2.2 | None | SRR6832379 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR28393820 | MDR-TB | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1013639 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653197 | MDR-TB | lineage4.4.1.1 | None | SRR7652980 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR21732141 | HR-TB | lineage1.2.1.2.1 | None | ERR8975641 | MDR-TB | lineage4.3.2.1 | None | SRR2100601 | RR-TB | lineage4.4.1.1 | None | SRR23691413 | Pre-XDR-TB | lineage4.5 | None | ERR11773784 | MDR-TB | lineage4.2.1.1 | None |
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