EBG00000313325 - n.1239T>C
Drug resistance types
82 Sensitive
0 RR-TB
12 HR-TB
10 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1 | 83 |
| lineage2.2.1 | 20 |
| lineage2.2.1.1;lineage4.1.1 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage4.1.2.1 | 3 |
| lineage4.9 | 15 |
| lineage4.3.2 | 5 |
| lineage4.3.4.1 | 4 |
| lineage2.2.1.1 | 3 |
| lineage4.3.4.2 | 2 |
| lineage4.3.3 | 2 |
| lineage3.1 | 1 |
| lineage3 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 143 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21736384 | Sensitive | lineage4.1.1 | None | SRR11662675 | Pre-XDR-TB | lineage2.2.1 | None | SRR25534231 | Sensitive | lineage2.2.1 | None | SRR21662754 | Sensitive | lineage4.1.1 | None | SRR29666876 | Sensitive | lineage4.1.1 | None | SRR21658369 | Sensitive | lineage4.1.1 | None | SRR18909909 | Sensitive | lineage4.1.1 | None | SRR28389883 | Sensitive | lineage4.1.1 | None | SRR28389897 | Other | lineage4.1.1 | None | SRR28558427 | Sensitive | lineage4.1.1 | None | SRR28389852 | Other | lineage2.2.1.1;lineage4.1.1 | None | SRR16058348 | Sensitive | lineage1.2.1.2.1 | None | SRR18665452 | Other | lineage4.1.1 | None | SRR18665479 | HR-TB | lineage4.1.1 | None | SRR18665482 | Sensitive | lineage4.1.1 | None | ERR11068423 | Sensitive | lineage4.1.2.1 | None | SRR28389839 | HR-TB | lineage4.1.1 | None | ERR9125681 | Sensitive | lineage1.2.1.2.1 | None | SRR21737220 | Sensitive | lineage4.1.1 | None | SRR1208536 | Other | lineage4.9 | None | SRR1208925 | Other | lineage4.9 | None | DRR261116 | Sensitive | lineage4.1.1 | None | SRR28389877 | MDR-TB | lineage4.1.1 | None | ERR4025113 | Sensitive | lineage4.3.2 | None | SRR25515793 | Sensitive | lineage2.2.1 | None | ERR13259995 | MDR-TB | lineage4.1.1 | None | SRR1209015 | Sensitive | lineage4.9 | None | SRR18911868 | Other | lineage4.1.1 | None | SRR22248486 | Other | lineage4.1.1 | None | ERR3148196 | Sensitive | lineage4.1.1 | mx | SRR18665461 | Other | lineage4.1.1 | None | SRR25514995 | Sensitive | lineage2.2.1 | None | SRR18665468 | Sensitive | lineage4.1.1 | None | SRR15316343 | HR-TB | lineage2.2.1 | None | SRR22248491 | Other | lineage4.1.1 | None | ERR4811585 | Sensitive | lineage2.2.1 | cn | SRR25514912 | Sensitive | lineage2.2.1 | None | ERR9786559 | HR-TB | lineage4.1.2.1 | None | SRR5709977 | Sensitive | lineage2.2.1 | th | SRR29219660 | Other | lineage4.1.1 | None | SRR21676428 | Other | lineage4.1.1 | None | SRR21587547 | Sensitive | lineage4.1.1 | None | ERR10969263 | Sensitive | lineage4.3.4.1 | None | SRR18665476 | Sensitive | lineage4.1.1 | None | ERR13292165 | Sensitive | lineage4.1.1 | None | SRR29055398 | Sensitive | lineage4.1.1 | None | SRR19267894 | Sensitive | lineage4.1.1 | None | SRR16103898 | Sensitive | lineage4.1.1 | None | SRR29053607 | Sensitive | lineage4.1.1 | None | SRR29096135 | Other | lineage4.1.1 | None | SRR29690811 | Pre-XDR-TB | lineage4.1.1 | None | SRR29539077 | MDR-TB | lineage2.2.1 | None | ERR13110317 | Pre-XDR-TB | lineage4.1.1 | None | SRR1208694 | Sensitive | lineage4.9 | None | SRR26112385 | Sensitive | lineage4.1.1 | None | SRR17333997 | Sensitive | lineage2.2.1 | None | SRR22248467 | Sensitive | lineage4.1.1 | None | ERR3273120 | MDR-TB | lineage2.2.1 | None | SRR15368916 | Other | lineage2.2.1 | None | SRR6397479 | Sensitive | lineage4.1.1 | ca | SRR6397746 | Sensitive | lineage4.1.1 | ca | SRR29053550 | Sensitive | lineage4.1.1 | None | SRR25514976 | Sensitive | lineage2.2.1 | None | SRR16370541 | MDR-TB | lineage2.2.1.1 | None | SRR6398101 | Sensitive | lineage4.1.1 | ca | SRR1202378 | Other | lineage4.9 | None | SRR21657452 | Sensitive | lineage4.1.1 | None | SRR29053597 | Sensitive | lineage4.1.1 | None | SRR21277094 | Sensitive | lineage2.2.1 | None | SRR22248479 | Sensitive | lineage4.1.1 | None | ERR1035358 | Pre-XDR-TB | lineage4.3.4.2 | br | ERR2660539 | Other | lineage4.9 | None | SRR30049951 | Sensitive | lineage4.1.1 | None | SRR29231799 | MDR-TB | lineage4.3.3 | None | SRR29052854 | Sensitive | lineage4.1.1 | None | SRR19325548 | Sensitive | lineage4.1.1 | None | ERR13260471 | Sensitive | lineage2.2.1 | None | SRR28351442 | HR-TB | lineage3.1 | None | SRR28683938 | Other | lineage4.1.1 | None | SRR19128034 | Sensitive | lineage4.1.1 | None | SRR28860022 | Sensitive | lineage4.1.1 | None | SRR1208611 | Other | lineage4.9 | None | SRR1208476 | Other | lineage4.9 | None | SRR1208553 | Other | lineage4.9 | None | SRR21727717 | Sensitive | lineage4.1.1 | None | ERR13260086 | MDR-TB | lineage4.1.1 | None | ERR7911332 | MDR-TB | lineage2.2.1.1 | vn | SRR1208765 | Sensitive | lineage4.9 | None | SRR28986815 | Sensitive | lineage4.3.2 | None | SRR21587549 | Sensitive | lineage4.1.1 | None | SRR28409682 | HR-TB | lineage4.1.1 | None | ERR2707001 | MDR-TB | lineage4.3.3 | cd | SRR18665432 | Sensitive | lineage4.1.1 | None | SRR28389856 | Other | lineage4.1.1 | None | SRR28389853 | Other | lineage4.1.1 | None | SRR6397384 | Sensitive | lineage4.1.1 | ca | SRR28381184 | Sensitive | lineage4.1.1 | None | SRR1202404 | Other | lineage4.9 | None | SRR1208281 | Sensitive | lineage4.9 | None | SRR28389872 | Other | lineage4.1.1 | None | SRR28045243 | Sensitive | lineage3 | None | DRR184888 | Other | lineage2.2.1 | vn | SRR1208836 | Other | lineage4.9 | None | SRR6397568 | Other | lineage4.1.1 | None | SRR19325556 | Sensitive | lineage4.1.1 | None | SRR11734768 | Pre-XDR-TB | lineage2.2.1 | None | SRR28389888 | Sensitive | lineage4.1.1 | None | SRR28389901 | HR-TB | lineage4.1.1 | None | ERR11082130 | Sensitive | lineage4.4.1.1 | None | ERR6865664 | Sensitive | lineage4.3.2 | None | ERR3148161 | Other | lineage4.1.1 | mx | SRR15723263 | HR-TB | lineage2.2.1 | None | SRR1208759 | Sensitive | lineage4.9 | None | SRR18665446 | HR-TB | lineage4.1.1 | None | ERR11067357 | Other | lineage4.1.2.1 | None | SRR1202728 | Other | lineage4.9 | None | SRR27980506 | HR-TB | lineage4.1.1 | None | ERR4676901 | Sensitive | lineage4.3.4.1 | None | SRR22251203 | Sensitive | lineage2.2.1.1 | None | SRR21732495 | Sensitive | lineage2.2.1 | None | ERR1035356 | Pre-XDR-TB | lineage4.3.4.2 | br | SRR29342481 | Sensitive | lineage4.1.1 | None | DRR261042 | Sensitive | lineage4.1.1 | None | SRR6397336 | Sensitive | lineage4.1.1 | ca | SRR6398078 | Sensitive | lineage4.1.1 | ca | SRR6398088 | Sensitive | lineage4.1.1 | ca | SRR21587548 | Sensitive | lineage4.1.1 | None | ERR13260259 | HR-TB | lineage4.3.2 | None | SRR21587545 | Sensitive | lineage4.1.1 | None | SRR29052662 | Other | lineage4.1.1 | None | SRR30049949 | Sensitive | lineage4.1.1 | None | ERR4676884 | Sensitive | lineage4.3.4.1 | None | ERR13291746 | HR-TB | lineage4.1.1 | None | ERR13291872 | Sensitive | lineage4.1.1 | None | ERR7764393 | Sensitive | lineage4.3.4.1 | None | SRR29053449 | Sensitive | lineage4.1.1 | None | SRR21709606 | Sensitive | lineage4.1.1 | None | ERR13292345 | Other | lineage4.1.1 | None | ERR751561 | MDR-TB | lineage4.3.2 | pe | SRR30340071 | Other | lineage4.1.1 | None | SRR16370662 | Sensitive | lineage4.1.1 | None | SRR30182758 | Sensitive | lineage2.2.1 | None | SRR29052775 | Other | lineage4.1.1 | None |
|---|
