EBG00000313325 - n.17T>G
Drug resistance types
3 Sensitive
13 RR-TB
5 HR-TB
45 MDR-TB
15 Pre-XDR-TB
2 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.1 | 3 |
| lineage4.3.3 | 33 |
| lineage2.2.1 | 13 |
| lineage2.2.2 | 12 |
| lineage1.1.1 | 1 |
| lineage3 | 2 |
| lineage1.2.2.2 | 6 |
| lineage4.1.2.1 | 4 |
| lineage1.1.2 | 2 |
| lineage1.2.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage1.2.2.2;lineage4.1;lineage4.3.3 | 1 |
| lineage3.1.2 | 1 |
| lineage4.8 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 83 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29772441 | HR-TB | lineage1.2.2.1 | None | SRR9971097 | Pre-XDR-TB | lineage4.3.3 | None | ERR13284753 | MDR-TB | lineage2.2.1 | None | ERR13284445 | MDR-TB | lineage2.2.1 | None | ERR13285027 | MDR-TB | lineage2.2.1 | None | ERR1352345 | RR-TB | lineage2.2.2 | cn | ERR5987341 | MDR-TB | lineage4.3.3 | None | SRR2063844 | RR-TB | lineage2.2.2 | None | ERR9119809 | MDR-TB | lineage4.3.3 | None | ERR9119976 | MDR-TB | lineage4.3.3 | None | ERR7911208 | Pre-XDR-TB | lineage4.3.3 | za | ERR10748245 | MDR-TB | lineage4.3.3 | None | SRR26399549 | HR-TB | lineage1.1.1 | None | ERR5987284 | MDR-TB | lineage4.3.3 | None | ERR5987211 | MDR-TB | lineage4.3.3 | None | ERR9117820 | Sensitive | lineage3 | None | ERR4820709 | MDR-TB | lineage1.2.2.2 | gb | ERR9119972 | MDR-TB | lineage4.3.3 | None | ERR7737888 | MDR-TB | lineage4.3.3 | None | SRR29385423 | Pre-XDR-TB | lineage2.2.2 | None | ERR11552006 | MDR-TB | lineage4.1.2.1 | None | SRR29096307 | Pre-XDR-TB | lineage4.3.3 | None | ERR9120081 | MDR-TB | lineage4.3.3 | None | ERR10610190 | Pre-XDR-TB | lineage4.3.3 | None | SRR29017241 | MDR-TB | lineage1.1.2 | None | SRR28706469 | MDR-TB | lineage2.2.1 | None | ERR11080911 | MDR-TB | lineage2.2.1 | None | ERR9119743 | MDR-TB | lineage4.3.3 | None | SAMN02350420 | MDR-TB | lineage4.3.3 | za | ERR13288939 | Pre-XDR-TB | lineage4.3.3 | None | DRR130194 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093892 | MDR-TB | lineage4.3.3 | None | SRR10726051 | HR-TB | lineage1.2.2.1 | None | SRR24710062 | MDR-TB | lineage2.2.1 | None | ERR1352348 | RR-TB | lineage2.2.2 | cn | ERR4798523 | MDR-TB | lineage1.2.2.2 | None | SRR7070127 | Sensitive | lineage1.2.2.2 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR1023294 | HR-TB | lineage1.2.1.1 | None | SRR2062305 | RR-TB | lineage2.2.2 | None | ERR9120082 | MDR-TB | lineage4.3.3 | None | ERR11551981 | MDR-TB | lineage4.1.2.1 | None | ERR1352347 | RR-TB | lineage2.2.2 | cn | ERR11082628 | MDR-TB | lineage2.2.1 | None | ERR11082667 | MDR-TB | lineage2.2.1 | None | ERR4423490 | MDR-TB | lineage4.3.3 | None | ERR4553776 | RR-TB | lineage1.1.2 | None | SRR2063842 | RR-TB | lineage2.2.2 | None | ERR5917976 | XDR-TB | lineage4.3.3 | za | SRR28706576 | MDR-TB | lineage2.2.1 | None | ERR11081930 | MDR-TB | lineage2.2.1 | None | ERR8773880 | RR-TB | lineage4.1.2.1 | None | SRR2063843 | RR-TB | lineage2.2.2 | None | SRR23316630 | HR-TB | lineage1.2.1.2.1 | None | SRR2063840 | RR-TB | lineage2.2.2 | None | ERR13195604 | MDR-TB | lineage2.2.2 | None | ERR8773878 | RR-TB | lineage4.1.2.1 | None | SRR29289268 | Pre-XDR-TB | lineage3 | None | SRR28706643 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772730 | MDR-TB | lineage4.3.4.2 | None | ERR2515797 | MDR-TB | lineage4.3.3 | za | ERR6052100 | MDR-TB | lineage4.3.3 | None | ERR1352349 | RR-TB | lineage2.2.2 | cn | ERR13286094 | MDR-TB | lineage1.2.2.2;lineage4.1;lineage4.3.3 | None | ERR5987189 | MDR-TB | lineage4.3.3 | None | ERR1352346 | RR-TB | lineage2.2.2 | cn | ERR4809248 | MDR-TB | lineage4.3.3 | za | ERR9992893 | XDR-TB | lineage4.3.3 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR5987395 | MDR-TB | lineage4.3.3 | None | ERR6052072 | MDR-TB | lineage4.3.3 | None | ERR6362466 | MDR-TB | lineage4.3.3 | None | ERR9119975 | MDR-TB | lineage4.3.3 | None | ERR2514385 | Sensitive | lineage1.2.2.2 | gb | ERR4808891 | Pre-XDR-TB | lineage4.3.3 | za | ERR4811317 | Pre-XDR-TB | lineage2.2.1 | cn | SRR15014612 | Pre-XDR-TB | lineage3.1.2 | None | ERR10748249 | MDR-TB | lineage4.3.3 | None | ERR4813977 | MDR-TB | lineage4.8 | br | ERR4799454 | Pre-XDR-TB | lineage1.2.2.2 | in | ERR9806841 | Pre-XDR-TB | lineage4.3.3 | None | ERR11082673 | MDR-TB | lineage4.8 | None | SRR29772650 | MDR-TB | lineage1.2.2.1 | None |
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