EBG00000313325 - n.514A>T
Drug resistance types
0 Sensitive
1 RR-TB
13 HR-TB
59 MDR-TB
17 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 10 |
| lineage1.2.2.2 | 20 |
| lineage3 | 11 |
| lineage4.1.2.1 | 11 |
| lineage1.2.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4 | 4 |
| lineage4.4.1.1 | 3 |
| lineage4.3.3 | 7 |
| lineage4.8 | 5 |
| lineage4.5;lineage3 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.5 | 3 |
| lineage4.3.2 | 3 |
| lineage4.1.1.3 | 1 |
| lineage2.2.2 | 2 |
| lineage4.3 | 5 |
| lineage4.2.2 | 1 |
| lineage4.1.1 | 2 |
| 5 | |
| lineage4.3.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage1.2.2.2;lineage1.1.2 | 1 |
| lineage4.3.4.2.1;lineage1.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 102 |
Geographic prevalence
Country level data for this variant is available for 39 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2145499 | Other | lineage2.2.1 | None | ERR212054 | MDR-TB | lineage1.2.2.2 | mw | ERR2145491 | Other | lineage2.2.1 | None | ERR221596 | MDR-TB | lineage1.2.2.2 | mw | ERR2510697 | MDR-TB | lineage3 | pk | SRR5073629 | HR-TB | lineage2.2.1 | vn | SRR5065629 | Other | lineage4.1.2.1 | vn | ERR245836 | MDR-TB | lineage1.2.2 | mw | ERR245829 | MDR-TB | lineage1.2.2.2 | mw | ERR245651 | MDR-TB | lineage1.2.2.2 | mw | ERR245670 | MDR-TB | lineage1.2.2.2 | mw | SRR5073718 | Other | lineage2.2.1.1 | vn | ERR2510171 | MDR-TB | lineage4 | pe | ERR2510383 | Pre-XDR-TB | lineage3 | None | ERR2510467 | Pre-XDR-TB | lineage3 | pk | ERR2510395 | Pre-XDR-TB | lineage3 | None | ERR2515247 | MDR-TB | lineage4.4.1.1 | za | SAMN02053769 | Other | lineage4.3.3 | za | ERR2516956 | MDR-TB | lineage3 | gb | SRR5535926 | HR-TB | lineage1.2.2.2 | None | SRR23340064 | MDR-TB | lineage4.8 | None | ERR2707073 | RR-TB | lineage4.8 | cd | SRR23340121 | MDR-TB | lineage4.8 | None | SRR23340104 | MDR-TB | lineage4.8 | None | ERR4827808 | MDR-TB | lineage2.2.1 | None | SRR833011 | Other | lineage4.3.3 | None | ERR4829960 | MDR-TB | lineage4.5;lineage3 | pk | ERR551787 | HR-TB | lineage4.1.2.1 | de | SRR6397526 | HR-TB | lineage1.2.1.2.1 | ca | ERR4831614 | MDR-TB | lineage2.2.1 | vn | SRR8651617 | Pre-XDR-TB | lineage4.5 | None | SRR833094 | Other | lineage4.3.3 | None | ERR067610 | HR-TB | lineage2.2.1 | ru | ERR1034594 | MDR-TB | lineage3 | pk | ERR10680150 | MDR-TB | lineage4.1.2.1 | None | ERR1035350 | MDR-TB | lineage4.3.2 | br | ERR1063861 | MDR-TB | lineage1.2.2.2 | None | ERR10680121 | MDR-TB | lineage4.1.2.1 | None | ERR1035277 | Pre-XDR-TB | lineage4.3.2 | br | ERR1035344 | MDR-TB | lineage4.3.2 | br | ERR10465881 | HR-TB | lineage4.1.1.3 | None | ERR3273206 | Pre-XDR-TB | lineage2.2.2 | None | ERR10680195 | MDR-TB | lineage4.1.2.1 | None | ERR11043159 | MDR-TB | lineage4.3 | None | ERR11044430 | Other | lineage4.2.2 | None | ERR126605 | MDR-TB | lineage1.2.2.2 | mw | ERR4178155 | Other | lineage4.1.1 | None | ERR3287819 | MDR-TB | lineage4 | pe | ERR4553789 | Pre-XDR-TB | None | ERR4553582 | MDR-TB | None | ERR4553577 | Pre-XDR-TB | None | ERR4553792 | MDR-TB | None | ERR4553882 | Pre-XDR-TB | None | ERR5865508 | MDR-TB | lineage4.1.2.1 | None | ERR4796486 | MDR-TB | lineage3 | in | ERR4798154 | Other | lineage1.2.2.2 | in | ERR5865509 | MDR-TB | lineage4.1.2.1 | None | ERR5866469 | MDR-TB | lineage4.3.3 | None | ERR5865512 | MDR-TB | lineage4.1.2.1 | None | ERR5865513 | MDR-TB | lineage4.1.2.1 | None | ERR688026 | MDR-TB | lineage3 | None | ERR5866468 | MDR-TB | lineage4.3.3 | None | ERR5866594 | MDR-TB | lineage4.1.2.1 | None | ERR5987360 | MDR-TB | lineage4.3.2.1 | None | ERR6865852 | Other | lineage4.1.1 | None | ERR736807 | MDR-TB | lineage1.2.2.2 | None | ERR11049950 | MDR-TB | lineage4.1.2.1 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR773802 | MDR-TB | lineage1.2.2.2 | None | ERR7737869 | MDR-TB | lineage4.4.1.1 | None | ERR775389 | MDR-TB | lineage4 | pe | SRR12416832 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9907699 | MDR-TB | lineage4.3.3 | None | SRR10525374 | Pre-XDR-TB | lineage4.8 | None | ERR779679 | MDR-TB | lineage1.2.2.2 | None | ERR845936 | MDR-TB | lineage4 | pe | ERR9286002 | HR-TB | lineage4.3 | None | ERR9286033 | HR-TB | lineage4.3 | None | SRR11638839 | Pre-XDR-TB | lineage3 | None | SRR13591399 | Other | lineage4.3.4.1 | None | SRR12882567 | HR-TB | lineage1.2.2.2 | None | SRR14088381 | Pre-XDR-TB | lineage3 | None | SRR15316476 | MDR-TB | lineage2.2.2 | None | SRR15316025 | Pre-XDR-TB | lineage4.5 | None | SRR15316314 | MDR-TB | lineage2.2.1 | None | SRR6797542 | MDR-TB | lineage2.2.1 | None | SRR16115033 | HR-TB | lineage2.2.1 | None | SRR21277567 | Pre-XDR-TB | lineage4.5 | None | ERR11082680 | Pre-XDR-TB | lineage4.3.3 | None | SRR18912071 | HR-TB | lineage2.2.1 | None | SRR19428621 | MDR-TB | lineage1.2.2.2 | None | SRR21685345 | MDR-TB | lineage4.3.4.2 | None | SRR24114364 | Pre-XDR-TB | lineage3 | None | ERR181930 | MDR-TB | lineage1.2.2.2 | mw | ERR181933 | MDR-TB | lineage1.2.2.2 | mw | ERR163947 | MDR-TB | lineage1.2.2.2;lineage1.1.2 | mw | ERR4813639 | HR-TB | lineage4.3 | None | ERR161085 | MDR-TB | lineage1.2.2.2 | mw | ERR163962 | MDR-TB | lineage1.2.2.2 | mw | ERR164021 | MDR-TB | lineage4.3.4.2.1;lineage1.2.2.2 | mw | ERR181793 | MDR-TB | lineage1.2.2.2 | mw | ERR4814957 | HR-TB | lineage4.3 | gb |
|---|
