EBG00000313325 - n.514A>T
Drug resistance types
0 Sensitive
7 RR-TB
19 HR-TB
69 MDR-TB
14 Pre-XDR-TB
1 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.2 | 34 |
| lineage4.3.3 | 8 |
| lineage2.2.2 | 3 |
| lineage3 | 12 |
| lineage1.1.2;lineage1.2.2.2 | 1 |
| lineage4.1.2.1 | 16 |
| lineage2.2.1 | 10 |
| lineage4.3.2 | 3 |
| lineage4.4.1.1 | 3 |
| lineage4.8 | 5 |
| lineage4 | 6 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.5 | 3 |
| lineage4.1.1 | 2 |
| lineage4.3 | 5 |
| lineage6.2.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage1.2.2.2;lineage4.3.4.2.1 | 1 |
| lineage4.2.2 | 1 |
| lineage4.3.4.2 | 1 |
| 1 | |
| lineage1.1.3.3 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.2.1 | 4 |
| lineage2.2.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 129 |
Geographic prevalence
Country level data for this variant is available for 38 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR779679 | MDR-TB | lineage1.2.2.2 | None | SRR833011 | Other | lineage4.3.3 | None | ERR3273206 | Pre-XDR-TB | lineage2.2.2 | None | ERR2516956 | MDR-TB | lineage3 | gb | ERR9907699 | MDR-TB | lineage4.3.3 | None | ERR688026 | MDR-TB | lineage3 | None | ERR163947 | MDR-TB | lineage1.1.2;lineage1.2.2.2 | mw | ERR736807 | MDR-TB | lineage1.2.2.2 | None | SRR24709981 | RR-TB | lineage4.3.3 | None | ERR10680150 | MDR-TB | lineage4.1.2.1 | None | ERR4553792 | RR-TB | lineage1.2.2.2 | None | ERR161085 | MDR-TB | lineage1.2.2.2 | mw | ERR2145491 | Other | lineage2.2.1 | None | ERR1035344 | MDR-TB | lineage4.3.2 | br | ERR7737869 | MDR-TB | lineage4.4.1.1 | None | SRR23340104 | MDR-TB | lineage4.8 | None | ERR3287819 | MDR-TB | lineage4 | pe | ERR181930 | MDR-TB | lineage1.2.2.2 | mw | SRR26800433 | Other | lineage3 | None | SRR833094 | Other | lineage4.3.3 | None | SRR12882567 | HR-TB | lineage1.2.2.2 | None | ERR5865513 | MDR-TB | lineage4.1.2.1 | None | SRR11638839 | XDR-TB | lineage3 | None | SRR833002 | Other | lineage4.3.3;lineage4.9 | None | ERR775389 | MDR-TB | lineage4 | pe | ERR845936 | MDR-TB | lineage4 | pe | SRR15316025 | Pre-XDR-TB | lineage4.5 | None | ERR6865852 | Other | lineage4.1.1 | None | ERR5866594 | MDR-TB | lineage4.1.2.1 | None | ERR4796486 | MDR-TB | lineage3 | in | SRR23340121 | MDR-TB | lineage4.8 | None | ERR2707073 | RR-TB | lineage4.8 | cd | ERR9286033 | HR-TB | lineage4.3 | None | ERR163962 | MDR-TB | lineage1.2.2.2 | mw | ERR4814957 | HR-TB | lineage4.3 | gb | ERR10680046 | MDR-TB | lineage6.2.2 | None | ERR1063861 | MDR-TB | lineage1.2.2.2 | None | ERR11465991 | HR-TB | lineage1.2.2.2 | None | ERR11082680 | Pre-XDR-TB | lineage4.3.3 | None | ERR2510171 | MDR-TB | lineage4 | pe | ERR4553577 | RR-TB | lineage1.2.2.2 | None | ERR4831614 | MDR-TB | lineage2.2.1 | vn | ERR4553582 | RR-TB | lineage1.2.2.2 | None | ERR4798154 | Other | lineage1.2.2.2 | in | ERR126605 | MDR-TB | lineage1.2.2.2 | mw | SRR6397526 | HR-TB | lineage1.2.1.2.1 | ca | SRR24114364 | Pre-XDR-TB | lineage3 | None | ERR4827808 | MDR-TB | lineage2.2.1 | None | ERR11465995 | HR-TB | lineage1.2.2.2 | None | SRR14088381 | Pre-XDR-TB | lineage3 | None | SRR21277567 | Pre-XDR-TB | lineage4.5 | None | ERR164021 | MDR-TB | lineage1.2.2.2;lineage4.3.4.2.1 | mw | ERR2515247 | MDR-TB | lineage4.4.1.1 | za | ERR1035277 | Pre-XDR-TB | lineage4.3.2 | br | ERR11044430 | Other | lineage4.2.2 | None | SRR21685345 | MDR-TB | lineage4.3.4.2 | None | ERR11466222 | HR-TB | lineage1.2.2.2 | None | SRR28046118 | Other | lineage3 | None | ERR11776021 | Other | lineage4.1.2.1 | None | ERR4553882 | RR-TB | None | ERR2510467 | Pre-XDR-TB | lineage3 | pk | SRR8651617 | Pre-XDR-TB | lineage4.5 | None | ERR11043159 | MDR-TB | lineage4.3 | None | ERR245670 | MDR-TB | lineage1.2.2.2 | mw | ERR1035350 | MDR-TB | lineage4.3.2 | br | ERR10680195 | MDR-TB | lineage4.1.2.1 | None | ERR181793 | MDR-TB | lineage1.2.2.2 | mw | SRR22251987 | Other | lineage1.1.3.3 | None | ERR4813639 | HR-TB | lineage4.3 | None | SRR15316476 | MDR-TB | lineage2.2.2 | None | ERR221596 | MDR-TB | lineage1.2.2.2 | mw | ERR5865512 | MDR-TB | lineage4.1.2.1 | None | SRR13591399 | Other | lineage4.3.4.1 | None | ERR4553789 | RR-TB | lineage1.2.2.2 | None | SRR4423177 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR15316314 | MDR-TB | lineage2.2.1 | None | ERR245836 | MDR-TB | lineage1.2.2.2 | mw | ERR10680121 | MDR-TB | lineage4.1.2.1 | None | SRR22251627 | HR-TB | lineage1.2.2.2 | None | ERR9120045 | MDR-TB | lineage4.3.2.1 | None | ERR551787 | HR-TB | lineage4.1.2.1 | de | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR5987360 | MDR-TB | lineage4.3.2.1 | None | ERR11466223 | HR-TB | lineage1.2.2.2 | None | ERR9120046 | MDR-TB | lineage4.3.2.1 | None | SRR5065629 | Other | lineage4.1.2.1 | vn | SRR5073718 | Other | lineage2.2.1.1 | vn | ERR5865509 | MDR-TB | lineage4.1.2.1 | None | SRR19428621 | MDR-TB | lineage1.2.2.2 | None | SRR5073629 | HR-TB | lineage2.2.1 | vn | SRR20958137 | Other | lineage4.1.2.1 | None | ERR9286002 | HR-TB | lineage4.3 | None | ERR2510383 | Pre-XDR-TB | lineage3 | None | SRR11662182 | MDR-TB | lineage2.1 | None | ERR11465994 | HR-TB | lineage1.2.2.2 | None | ERR5987415 | MDR-TB | lineage4.3.2.1 | None | SAMN02053769 | Other | lineage4.3.3 | za | ERR11465075 | MDR-TB | lineage1.2.2.2 | None | SRR16088099 | MDR-TB | lineage4.1.2.1 | None | SRR5535926 | HR-TB | lineage1.2.2.2 | None | ERR11464997 | HR-TB | lineage1.2.2.2 | None | SRR16115033 | HR-TB | lineage2.2.1 | None | ERR11488778 | MDR-TB | lineage4.4.1.1 | None | ERR5866468 | MDR-TB | lineage4.3.3 | None | SRR24673552 | MDR-TB | lineage4.1.2.1 | None | ERR5866469 | MDR-TB | lineage4.3.3 | None | ERR067610 | HR-TB | lineage2.2.1 | ru | ERR245829 | MDR-TB | lineage1.2.2.2 | mw | SRR23340064 | MDR-TB | lineage4.8 | None | ERR552534 | MDR-TB | lineage4.1.2.1 | None | ERR11049950 | MDR-TB | lineage4.1.2.1 | None | ERR245651 | MDR-TB | lineage1.2.2.2 | mw | SRR12416832 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR27069390 | MDR-TB | lineage2.2.1 | None | SRR27069369 | MDR-TB | lineage2.2.1 | None | SRR28393420 | MDR-TB | lineage4 | None | SRR28393317 | MDR-TB | lineage4 | None | ERR1034594 | MDR-TB | lineage3 | pk | ERR2510697 | MDR-TB | lineage3 | pk | ERR5865508 | MDR-TB | lineage4.1.2.1 | None | ERR4178155 | Other | lineage4.1.1 | None | ERR10465881 | HR-TB | lineage4.1.1.3 | None | SRR25515845 | Pre-XDR-TB | lineage4.4.2 | None | ERR773802 | MDR-TB | lineage1.2.2.2 | None | ERR181933 | MDR-TB | lineage1.2.2.2 | mw | ERR212054 | MDR-TB | lineage1.2.2.2 | mw | ERR2145499 | Other | lineage2.2.1 | None | SRR10525374 | Pre-XDR-TB | lineage4.8 | None | DRR473920 | Other | lineage2.2.2 | None |
|---|
