EBG00000313325 - n.560C>T

Drug resistance types
274 Sensitive 0 RR-TB 5 HR-TB 6 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 146 Other
lineage Counts
lineage Count
lineage4.9 410
lineage4.1.2.1 20
lineage1.2.1.2.1 1
lineage1.2.2.2 1
spoligotype Counts
spoligotype Count
None 432
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1208874 Sensitive lineage4.9 None
SRR1208786 Sensitive lineage4.9 None
SRR1208803 Sensitive lineage4.9 None
SRR1208637 Sensitive lineage4.9 None
SRR1208761 Other lineage4.9 None
SRR1208947 Other lineage4.9 None
SRR1209022 Other lineage4.9 None
SRR1208435 Sensitive lineage4.9 None
SRR21727571 MDR-TB lineage4.1.2.1 None
SRR1208937 Sensitive lineage4.9 None
SRR1208956 Sensitive lineage4.9 None
ERR13291353 Sensitive lineage4.1.2.1 None
SRR1208475 Sensitive lineage4.9 None
SRR1208460 Other lineage4.9 None
SRR1202689 Sensitive lineage4.9 None
SRR1208463 Sensitive lineage4.9 None
SRR1208777 Other lineage4.9 None
SRR1208815 Sensitive lineage4.9 None
SRR1208827 Sensitive lineage4.9 None
SRR1208650 Other lineage4.9 None
SRR1202430 Sensitive lineage4.9 None
SRR1208301 Sensitive lineage4.9 None
SRR1202544 Other lineage4.9 None
SRR1202508 Sensitive lineage4.9 None
SRR1202547 Sensitive lineage4.9 None
SRR1202613 Other lineage4.9 None
SRR1202669 Sensitive lineage4.9 None
SRR1208499 Other lineage4.9 None
SRR1208710 Sensitive lineage4.9 None
SRR1208653 Other lineage4.9 None
SRR1209087 Sensitive lineage4.9 None
SRR1238557 Other lineage4.9 None
SRR1202452 Sensitive lineage4.9 None
SRR1208788 Other lineage4.9 None
SRR6152643 Other lineage1.2.1.2.1 ca
SRR1208555 Sensitive lineage4.9 None
SRR1208783 Other lineage4.9 None
SRR1209076 Other lineage4.9 None
SRR28409627 Sensitive lineage4.1.2.1 None
SRR1202442 Sensitive lineage4.9 None
SRR1202572 Sensitive lineage4.9 None
SRR1202629 Sensitive lineage4.9 None
SRR1202589 Other lineage4.9 None
SRR1208430 Sensitive lineage4.9 None
SRR1208462 Sensitive lineage4.9 None
SRR1208470 Sensitive lineage4.9 None
SRR1209029 Sensitive lineage4.9 None
ERR1465765 HR-TB lineage4.1.2.1 ai
SRR1202404 Other lineage4.9 None
SRR1202570 Sensitive lineage4.9 None
SRR1202725 Sensitive lineage4.9 None
SRR1202718 Sensitive lineage4.9 None
SRR1208173 Sensitive lineage4.9 None
SRR1208195 Sensitive lineage4.9 None
SRR1208544 Sensitive lineage4.9 None
SRR1208281 Sensitive lineage4.9 None
SRR1208461 Sensitive lineage4.9 None
SRR1208635 Other lineage4.9 None
SRR1208979 Other lineage4.9 None
SRR1202622 Sensitive lineage4.9 None
SRR1202383 Sensitive lineage4.9 None
SRR1208431 Sensitive lineage4.9 None
SRR1208432 Sensitive lineage4.9 None
SRR1202410 Other lineage4.9 None
SRR1202528 Sensitive lineage4.9 None
SRR1208274 Sensitive lineage4.9 None
SRR1208526 Sensitive lineage4.9 None
SRR1208634 Sensitive lineage4.9 None
SRR1208586 Other lineage4.9 None
SRR1208688 Sensitive lineage4.9 None
SRR1208769 Sensitive lineage4.9 None
SRR1208958 Other lineage4.9 None
SRR1209020 Sensitive lineage4.9 None
SRR1209004 Sensitive lineage4.9 None
SRR1202431 Sensitive lineage4.9 None
SRR1202437 Sensitive lineage4.9 None
SRR1202569 Other lineage4.9 None
SRR1208174 Other lineage4.9 None
SRR1208613 Sensitive lineage4.9 None
SRR1208767 Sensitive lineage4.9 None
SRR1208789 Sensitive lineage4.9 None
SRR1208885 Sensitive lineage4.9 None
SRR1208880 Other lineage4.9 None
SRR1208805 Sensitive lineage4.9 None
ERR13291352 Sensitive lineage4.1.2.1 None
SRR1208237 Sensitive lineage4.9 None
SRR1208337 Other lineage4.9 None
SRR1208290 Sensitive lineage4.9 None
SRR1208456 Sensitive lineage4.9 None
SRR1208721 Other lineage4.9 None
SRR1208807 Sensitive lineage4.9 None
SRR1208277 Other lineage4.9 None
SRR1208284 Sensitive lineage4.9 None
SRR1202598 Sensitive lineage4.9 None
SRR1208757 Other lineage4.9 None
SRR1208759 Sensitive lineage4.9 None
SRR1208926 Sensitive lineage4.9 None
SRR1208755 Sensitive lineage4.9 None
SRR1208655 Other lineage4.9 None
SRR1202728 Other lineage4.9 None
SRR1209019 Sensitive lineage4.9 None
SRR1202656 Sensitive lineage4.9 None
SRR1208672 Sensitive lineage4.9 None
SRR1202537 Other lineage4.9 None
SRR1202495 Sensitive lineage4.9 None
SRR1202516 Other lineage4.9 None
SRR1208332 Other lineage4.9 None
SRR1208444 Sensitive lineage4.9 None
SRR1208804 Sensitive lineage4.9 None
SRR1208670 Sensitive lineage4.9 None
SRR1209000 Other lineage4.9 None
SRR1208661 Other lineage4.9 None
SRR21709346 HR-TB lineage4.1.2.1 None
ERR13291441 Sensitive lineage4.1.2.1 None
SRR1208451 Sensitive lineage4.9 None
SRR1202406 Sensitive lineage4.9 None
SRR1202536 Other lineage4.9 None
SRR1202597 Other lineage4.9 None
SRR1202557 Sensitive lineage4.9 None
SRR1208455 Sensitive lineage4.9 None
SRR1208615 Other lineage4.9 None
SRR1208764 Sensitive lineage4.9 None
SRR1208695 Sensitive lineage4.9 None
SRR1209044 Other lineage4.9 None
SRR1208917 Sensitive lineage4.9 None
SRR1202733 Sensitive lineage4.9 None
SRR1209048 Other lineage4.9 None
SRR1202556 Other lineage4.9 None
SRR1208298 Sensitive lineage4.9 None
SRR1208648 Sensitive lineage4.9 None
SRR1208792 Other lineage4.9 None
SRR1208763 Other lineage4.9 None
SRR1202415 Sensitive lineage4.9 None
SRR1202702 Other lineage4.9 None
SRR1208794 Sensitive lineage4.9 None
SRR1208741 Other lineage4.9 None
SRR26112158 MDR-TB lineage4.1.2.1 None
SRR1209035 Sensitive lineage4.9 None
SRR1208676 Other lineage4.9 None
SRR1208313 Other lineage4.9 None
SRR1208405 Sensitive lineage4.9 None
SRR1208980 Sensitive lineage4.9 None
SRR1209032 Sensitive lineage4.9 None
SRR1208542 Other lineage4.9 None
SRR1202435 Other lineage4.9 None
SRR1202433 Sensitive lineage4.9 None
SRR1202680 Other lineage4.9 None
SRR1202611 Sensitive lineage4.9 None
SRR1209030 Sensitive lineage4.9 None
SRR1208439 Sensitive lineage4.9 None
SRR1208946 Other lineage4.9 None
SRR1209042 Sensitive lineage4.9 None
SRR1202403 Sensitive lineage4.9 None
SRR1208561 Other lineage4.9 None
SRR1202375 Other lineage4.9 None
SRR1208587 Sensitive lineage4.9 None
SRR1208873 Sensitive lineage4.9 None
SRR1208412 Sensitive lineage4.9 None
SRR1208525 Sensitive lineage4.9 None
SRR1202378 Other lineage4.9 None
SRR1208317 Sensitive lineage4.9 None
SRR1208325 Sensitive lineage4.9 None
SRR1208378 Other lineage4.9 None
SRR1208678 Sensitive lineage4.9 None
SRR1208768 Other lineage4.9 None
SRR1208750 Sensitive lineage4.9 None
SRR1202424 Sensitive lineage4.9 None
SRR1208999 Sensitive lineage4.9 None
SRR1208744 Other lineage4.9 None
SRR1202427 Sensitive lineage4.9 None
SRR1208295 Sensitive lineage4.9 None
SRR1208576 Sensitive lineage4.9 None
SRR1202399 Sensitive lineage4.9 None
SRR1202400 Sensitive lineage4.9 None
SRR1202503 Sensitive lineage4.9 None
SRR1202573 Other lineage4.9 None
SRR1208433 Sensitive lineage4.9 None
SRR1208452 Sensitive lineage4.9 None
SRR1208603 Other lineage4.9 None
SRR1208888 Sensitive lineage4.9 None
SRR1208900 Other lineage4.9 None
SRR1208912 Sensitive lineage4.9 None
SRR1208611 Other lineage4.9 None
SRR1208543 Other lineage4.9 None
SRR1208476 Other lineage4.9 None
SRR1202628 Sensitive lineage4.9 None
SRR1202648 Other lineage4.9 None
SRR1208270 Sensitive lineage4.9 None
SRR1208283 Sensitive lineage4.9 None
SRR1208338 Sensitive lineage4.9 None
SRR1208377 Other lineage4.9 None
SRR1208486 Other lineage4.9 None
SRR1208686 Sensitive lineage4.9 None
SRR1208666 Other lineage4.9 None
SRR1208553 Other lineage4.9 None
SRR1208732 Sensitive lineage4.9 None
SRR1208801 Sensitive lineage4.9 None
SRR1208446 Sensitive lineage4.9 None
SRR1202708 Other lineage4.9 None
SRR1208345 Sensitive lineage4.9 None
ERR1465763 HR-TB lineage4.1.2.1 do
SRR1208797 Sensitive lineage4.9 None
SRR1208537 Other lineage4.9 None
SRR1202578 Sensitive lineage4.9 None
SRR1202381 Sensitive lineage4.9 None
SRR1208524 Sensitive lineage4.9 None
SRR1208642 Sensitive lineage4.9 None
SRR28409692 Sensitive lineage4.1.2.1 None
SRR1208306 Other lineage4.9 None
SRR1208211 Sensitive lineage4.9 None
SRR1208530 Other lineage4.9 None
SRR1208302 Sensitive lineage4.9 None
SRR1208449 Sensitive lineage4.9 None
SRR1208477 Sensitive lineage4.9 None
SRR1208536 Other lineage4.9 None
SRR1208669 Sensitive lineage4.9 None
SRR1208683 Other lineage4.9 None
SRR1208701 Sensitive lineage4.9 None
SRR1208913 Sensitive lineage4.9 None
SRR1208925 Other lineage4.9 None
SRR1208556 Sensitive lineage4.9 None
SRR1208574 Sensitive lineage4.9 None
SRR1208682 Other lineage4.9 None
SRR1208870 Sensitive lineage4.9 None
SRR1208196 Sensitive lineage4.9 None
SRR1208297 Other lineage4.9 None
SRR1208335 Sensitive lineage4.9 None
SRR1208370 Sensitive lineage4.9 None
SRR1208395 Other lineage4.9 None
SRR1208836 Other lineage4.9 None
SRR1208879 Sensitive lineage4.9 None
SRR28859906 MDR-TB lineage4.1.2.1 None
SRR29052760 HR-TB lineage4.1.2.1 None
SRR1209015 Sensitive lineage4.9 None
SRR1208906 Other lineage4.9 None
SRR1208588 Other lineage4.9 None
SRR1208849 Sensitive lineage4.9 None
SRR1202662 Sensitive lineage4.9 None
SRR1208422 Other lineage4.9 None
SRR1208978 Sensitive lineage4.9 None
SRR1208660 Sensitive lineage4.9 None
SRR1208848 Sensitive lineage4.9 None
SRR1208908 Sensitive lineage4.9 None
SRR1208957 Sensitive lineage4.9 None
SRR1209039 Sensitive lineage4.9 None
SRR1208436 Other lineage4.9 None
SRR1209037 Sensitive lineage4.9 None
SRR29055716 MDR-TB lineage4.1.2.1 None
SRR1202414 Sensitive lineage4.9 None
SRR1202538 Sensitive lineage4.9 None
SRR1202741 Sensitive lineage4.9 None
SRR1208342 Other lineage4.9 None
SRR1208668 Other lineage4.9 None
SRR1208693 Sensitive lineage4.9 None
SRR1208784 Other lineage4.9 None
SRR1208824 Other lineage4.9 None
SRR1208871 Sensitive lineage4.9 None
SRR1208861 Other lineage4.9 None
SRR1208881 Sensitive lineage4.9 None
SRR21710672 Sensitive lineage4.1.2.1 None
SRR1202388 Sensitive lineage4.9 None
SRR1202446 Sensitive lineage4.9 None
SRR1202603 Sensitive lineage4.9 None
SRR1202721 Sensitive lineage4.9 None
SRR1208559 Other lineage4.9 None
SRR1208471 Other lineage4.9 None
SRR1208921 Other lineage4.9 None
SRR1202408 Other lineage4.9 None
SRR1208406 Sensitive lineage4.9 None
SRR1202507 Other lineage4.9 None
SRR1208238 Other lineage4.9 None
SRR1208465 Other lineage4.9 None
SRR1208507 Sensitive lineage4.9 None
SRR1208552 Other lineage4.9 None
SRR1208194 Other lineage4.9 None
SRR1208562 Other lineage4.9 None
SRR1208612 Other lineage4.9 None
SRR1208441 Sensitive lineage4.9 None
SRR1208774 Sensitive lineage4.9 None
SRR1202706 Other lineage4.9 None
SRR1208969 Sensitive lineage4.9 None
SRR1208575 Sensitive lineage4.9 None
SRR1208468 Other lineage4.9 None
SRR1202726 Sensitive lineage4.9 None
SRR1208573 Sensitive lineage4.9 None
SRR1208897 Other lineage4.9 None
SRR1208626 Sensitive lineage4.9 None
SRR1209047 Sensitive lineage4.9 None
SRR1208604 Sensitive lineage4.9 None
SRR1208847 Other lineage4.9 None
SRR1208886 Other lineage4.9 None
SRR1208872 Sensitive lineage4.9 None
SRR1209021 Sensitive lineage4.9 None
SRR1208310 Sensitive lineage4.9 None
SRR1208515 Sensitive lineage4.9 None
SRR1208694 Sensitive lineage4.9 None
SRR1208882 Sensitive lineage4.9 None
SRR1208919 Sensitive lineage4.9 None
SRR1202380 Sensitive lineage4.9 None
SRR1208567 Sensitive lineage4.9 None
SRR1202605 Sensitive lineage4.9 None
SRR1208577 Other lineage4.9 None
SRR1202432 Sensitive lineage4.9 None
SRR1208229 Sensitive lineage4.9 None
SRR1208614 Other lineage4.9 None
SRR1208496 Sensitive lineage4.9 None
SRR1208802 Sensitive lineage4.9 None
SRR1202583 Sensitive lineage4.9 None
SRR1208222 Sensitive lineage4.9 None
SRR1202397 Sensitive lineage4.9 None
SRR1202548 Sensitive lineage4.9 None
SRR26112749 MDR-TB lineage4.1.2.1 None
SRR1209050 Other lineage4.9 None
SRR1208645 Sensitive lineage4.9 None
SRR1208584 Sensitive lineage4.9 None
SRR1209038 Sensitive lineage4.9 None
SRR1208765 Sensitive lineage4.9 None
SRR1208448 Sensitive lineage4.9 None
SRR1208905 Sensitive lineage4.9 None
SRR1208506 Sensitive lineage4.9 None
SRR1208479 Sensitive lineage4.9 None
SRR1202555 Sensitive lineage4.9 None
SRR1202627 Other lineage4.9 None
SRR1208261 Sensitive lineage4.9 None
SRR1208498 Sensitive lineage4.9 None
SRR1208667 Sensitive lineage4.9 None
SRR1208730 Sensitive lineage4.9 None
SRR1208467 Sensitive lineage4.9 None
SRR1208927 Sensitive lineage4.9 None
SRR1208533 Sensitive lineage4.9 None
SRR1208998 Other lineage4.9 None
SRR1202550 Sensitive lineage4.9 None
SRR1208249 Sensitive lineage4.9 None
SRR1208327 Sensitive lineage4.9 None
SRR1208450 Sensitive lineage4.9 None
SRR1202523 Sensitive lineage4.9 None
SRR1208233 Other lineage4.9 None
SRR1208236 Other lineage4.9 None
SRR1208675 Sensitive lineage4.9 None
SRR28409409 Sensitive lineage4.1.2.1 None
SRR1208535 Sensitive lineage4.9 None
SRR1208643 Sensitive lineage4.9 None
SRR1208647 Sensitive lineage4.9 None
SRR1208756 Other lineage4.9 None
SRR1208875 Sensitive lineage4.9 None
SRR1209049 Other lineage4.9 None
SRR1202420 Other lineage4.9 None
SRR1208215 Sensitive lineage4.9 None
SRR1208278 Sensitive lineage4.9 None
SRR1208800 Sensitive lineage4.9 None
SRR1208722 Other lineage4.9 None
SRR1208826 Sensitive lineage4.9 None
SRR1208911 Sensitive lineage4.9 None
SRR1208990 Sensitive lineage4.9 None
SRR1209036 Sensitive lineage4.9 None
SRR1202425 Sensitive lineage4.9 None
SRR1202735 Sensitive lineage4.9 None
SRR1208264 Sensitive lineage4.9 None
SRR1208353 Other lineage4.9 None
SRR1208398 Sensitive lineage4.9 None
SRR1208924 Sensitive lineage4.9 None
SRR29053294 MDR-TB lineage4.1.2.1 None
SRR1208221 Other lineage4.9 None
SRR1202379 Other lineage4.9 None
SRR1202509 Sensitive lineage4.9 None
SRR1202520 Sensitive lineage4.9 None
SRR1202610 Sensitive lineage4.9 None
SRR1208457 Sensitive lineage4.9 None
SRR1208779 Sensitive lineage4.9 None
SRR1208424 Other lineage4.9 None
SRR1208915 Other lineage4.9 None
SRR1209014 Sensitive lineage4.9 None
SRR19325682 HR-TB lineage4.1.2.1 None
SRR1202401 Sensitive lineage4.9 None
SRR1209046 Sensitive lineage4.9 None
SRR1208689 Sensitive lineage4.9 None
SRR1209005 Sensitive lineage4.9 None
SRR1208791 Other lineage4.9 None
SRR1202713 Sensitive lineage4.9 None
SRR1208487 Other lineage4.9 None
SRR1202599 Other lineage4.9 None
SRR1202719 Sensitive lineage4.9 None
SRR1208850 Other lineage4.9 None
SRR1209041 Sensitive lineage4.9 None
SRR1208165 Sensitive lineage4.9 None
SRR1208447 Sensitive lineage4.9 None
SRR1208534 Sensitive lineage4.9 None
SRR1202434 Sensitive lineage4.9 None
SRR1202496 Sensitive lineage4.9 None
SRR1202451 Sensitive lineage4.9 None
SRR1208478 Sensitive lineage4.9 None
SRR1208464 Other lineage4.9 None
SRR1208837 Sensitive lineage4.9 None
SRR1209003 Sensitive lineage4.9 None
SRR1208892 Sensitive lineage4.9 None
SRR1209026 Sensitive lineage4.9 None
SRR1202384 Other lineage4.9 None
SRR1208758 Other lineage4.9 None
ERR11252593 Sensitive lineage1.2.2.2 None
SRR1202405 Sensitive lineage4.9 None
SRR1209057 Other lineage4.9 None
SRR1202714 Sensitive lineage4.9 None
SRR1208785 Sensitive lineage4.9 None
SRR1208793 Other lineage4.9 None
SRR1208914 Other lineage4.9 None
SRR1208989 Sensitive lineage4.9 None
SRR1209016 Sensitive lineage4.9 None
SRR1202419 Other lineage4.9 None
SRR1208639 Other lineage4.9 None
SRR1208876 Other lineage4.9 None
SRR1208891 Other lineage4.9 None
SRR1208551 Other lineage4.9 None
SRR8758887 Pre-XDR-TB lineage4.1.2.1 None
SRR1208659 Other lineage4.9 None
SRR1208508 Other lineage4.9 None
SRR1208684 Sensitive lineage4.9 None
SRR1208488 Sensitive lineage4.9 None
SRR1208677 Other lineage4.9 None
SRR1208423 Sensitive lineage4.9 None
SRR1202489 Other lineage4.9 None
SRR1208368 Other lineage4.9 None
SRR28409670 Sensitive lineage4.1.2.1 None
SRR1202740 Other lineage4.9 None
SRR1208673 Sensitive lineage4.9 None
SRR1208563 Sensitive lineage4.9 None
SRR1202396 Other lineage4.9 None
SRR1208690 Other lineage4.9 None
SRR1208260 Sensitive lineage4.9 None
SRR1208473 Other lineage4.9 None
SRR1208585 Sensitive lineage4.9 None
SRR1209045 Other lineage4.9 None
SRR1202441 Sensitive lineage4.9 None