lineage | Count |
---|---|
lineage4.9 | 358 |
lineage1.1.3.1 | 1 |
lineage4.3.4.2.1 | 1 |
La1.7.1 | 1 |
lineage2.2.1 | 2 |
lineage4.9.1 | 1 |
La1.2 | 1 |
spoligotype | Count |
---|---|
None | 365 |
ID | Drug resistance | Lineage | Country iso2 | SRR1208524 | Sensitive | lineage4.9 | None | SRR1208642 | Sensitive | lineage4.9 | None | SRR1202523 | Sensitive | lineage4.9 | None | SRR1180119 | Other | lineage4.9 | None | SRR1180623 | Sensitive | lineage4.9 | None | SRR1183188 | Other | lineage4.9 | None | SRR1202570 | Sensitive | lineage4.9 | None | SRR1202725 | Sensitive | lineage4.9 | None | SRR1202718 | Sensitive | lineage4.9 | None | SRR1208195 | Sensitive | lineage4.9 | None | SRR1208544 | Sensitive | lineage4.9 | None | SRR1208461 | Sensitive | lineage4.9 | None | SRR1183499 | Other | lineage4.9 | None | SRR1180786 | Sensitive | lineage4.9 | None | SRR1180074 | Sensitive | lineage4.9 | None | SRR1183294 | Sensitive | lineage4.9 | None | SRR1183345 | Sensitive | lineage4.9 | None | SRR1183726 | Sensitive | lineage4.9 | None | SRR1202528 | Sensitive | lineage4.9 | None | SRR1208274 | Sensitive | lineage4.9 | None | SRR1208526 | Sensitive | lineage4.9 | None | SRR1208688 | Sensitive | lineage4.9 | None | SRR1208749 | Sensitive | lineage4.9 | None | SRR1208769 | Sensitive | lineage4.9 | None | SRR1209020 | Sensitive | lineage4.9 | None | SRR1180494 | Sensitive | lineage4.9 | None | SRR1202431 | Sensitive | lineage4.9 | None | SRR1181590 | Sensitive | lineage4.9 | None | SRR1183259 | Sensitive | lineage4.9 | None | SRR1183458 | Sensitive | lineage4.9 | None | SRR1183476 | Sensitive | lineage4.9 | None | SRR1202437 | Sensitive | lineage4.9 | None | SRR1182960 | Sensitive | lineage4.9 | None | SRR1209014 | Sensitive | lineage4.9 | None | SRR1202446 | Sensitive | lineage4.9 | None | SRR1202721 | Sensitive | lineage4.9 | None | SRR1208290 | Sensitive | lineage4.9 | None | SRR1208456 | Sensitive | lineage4.9 | None | SRR1208284 | Sensitive | lineage4.9 | None | SRR1208406 | Sensitive | lineage4.9 | None | SRR1208757 | Other | lineage4.9 | None | SRR1208926 | Sensitive | lineage4.9 | None | SRR1183709 | Other | lineage4.9 | None | SRR1180032 | Other | lineage4.9 | None | SRR1183195 | Sensitive | lineage4.9 | None | SRR1183683 | Sensitive | lineage4.9 | None | SRR1181489 | Sensitive | lineage4.9 | None | SRR1181514 | Sensitive | lineage4.9 | None | SRR1208837 | Sensitive | lineage4.9 | None | SRR1209003 | Sensitive | lineage4.9 | None | SRR1209026 | Sensitive | lineage4.9 | None | SRR1180126 | Sensitive | lineage4.9 | None | SRR1208969 | Sensitive | lineage4.9 | None | SRR1182874 | Sensitive | lineage4.9 | None | SRR1208455 | Sensitive | lineage4.9 | None | SRR1208917 | Sensitive | lineage4.9 | None | SRR1208573 | Sensitive | lineage4.9 | None | SRR1180041 | Sensitive | lineage4.9 | None | SRR1183356 | Sensitive | lineage4.9 | None | SRR1182919 | Sensitive | lineage4.9 | None | SRR1180646 | Sensitive | lineage4.9 | None | SRR1208229 | Sensitive | lineage4.9 | None | SRR1208587 | Sensitive | lineage4.9 | None | SRR1208295 | Sensitive | lineage4.9 | None | SRR1202441 | Sensitive | lineage4.9 | None | SRR1180642 | Sensitive | lineage4.9 | None | SRR1182903 | Sensitive | lineage4.9 | None | SRR1208802 | Sensitive | lineage4.9 | None | SRR1180661 | Sensitive | lineage4.9 | None | SRR1208874 | Sensitive | lineage4.9 | None | SRR1208786 | Sensitive | lineage4.9 | None | SRR1208576 | Sensitive | lineage4.9 | None | SRR1181495 | Sensitive | lineage4.9 | None | SRR1202397 | Sensitive | lineage4.9 | None | SRR1202548 | Sensitive | lineage4.9 | None | SRR1183179 | Other | lineage4.9 | None | SRR1180103 | Sensitive | lineage4.9 | None | SRR1183682 | Other | lineage4.9 | None | SRR1208433 | Sensitive | lineage4.9 | None | SRR1208452 | Sensitive | lineage4.9 | None | SRR1208888 | Sensitive | lineage4.9 | None | SRR1182916 | Sensitive | lineage4.9 | None | SRR1208937 | Sensitive | lineage4.9 | None | SRR1208475 | Sensitive | lineage4.9 | None | SRR1180131 | Sensitive | lineage4.9 | None | SRR1183187 | Sensitive | lineage4.9 | None | SRR1208801 | Sensitive | lineage4.9 | None | SRR1208446 | Sensitive | lineage4.9 | None | SRR1208905 | Sensitive | lineage4.9 | None | SRR6650411 | Sensitive | lineage1.1.3.1 | None | SRR1202555 | Sensitive | lineage4.9 | None | SRR1208261 | Sensitive | lineage4.9 | None | SRR1208498 | Sensitive | lineage4.9 | None | SRR1208667 | Sensitive | lineage4.9 | None | SRR1208730 | Sensitive | lineage4.9 | None | SRR1208467 | Sensitive | lineage4.9 | None | SRR1183705 | Other | lineage4.9 | None | SRR1202381 | Sensitive | lineage4.9 | None | SRR1183695 | Sensitive | lineage4.9 | None | SRR1180021 | Sensitive | lineage4.9 | None | SRR1181575 | Other | lineage4.9 | None | SRR1202508 | Sensitive | lineage4.9 | None | SRR1202547 | Sensitive | lineage4.9 | None | SRR1202669 | Sensitive | lineage4.9 | None | SRR1208710 | Sensitive | lineage4.9 | None | SRR1180066 | Sensitive | lineage4.9 | None | SRR1183451 | Sensitive | lineage4.9 | None | SRR1181500 | Sensitive | lineage4.9 | None | SRR1181519 | Sensitive | lineage4.9 | None | SRR1208215 | Sensitive | lineage4.9 | None | SRR1208278 | Sensitive | lineage4.9 | None | SRR1208800 | Sensitive | lineage4.9 | None | SRR1208826 | Sensitive | lineage4.9 | None | SRR1208911 | Sensitive | lineage4.9 | None | SRR1208990 | Sensitive | lineage4.9 | None | SRR1209036 | Sensitive | lineage4.9 | None | SRR1183014 | Sensitive | lineage4.9 | None | SRR1183096 | Sensitive | lineage4.9 | None | SRR1183292 | Sensitive | lineage4.9 | None | SRR1202425 | Sensitive | lineage4.9 | None | SRR1208302 | Sensitive | lineage4.9 | None | SRR1208477 | Sensitive | lineage4.9 | None | SRR1208669 | Sensitive | lineage4.9 | None | SRR1208701 | Sensitive | lineage4.9 | None | SRR1208913 | Sensitive | lineage4.9 | None | SRR1180014 | Sensitive | lineage4.9 | None | SRR1180771 | Sensitive | lineage4.9 | None | SRR1180583 | Other | lineage4.9 | None | SRR1182971 | Sensitive | lineage4.9 | None | SRR1183109 | Other | lineage4.9 | None | SRR1183619 | Other | lineage4.9 | None | SRR1202509 | Sensitive | lineage4.9 | None | SRR1202610 | Sensitive | lineage4.9 | None | SRR1208779 | Sensitive | lineage4.9 | None | SRR1208660 | Sensitive | lineage4.9 | None | SRR1208848 | Sensitive | lineage4.9 | None | SRR1208957 | Sensitive | lineage4.9 | None | SRR1209039 | Sensitive | lineage4.9 | None | SRR1202414 | Sensitive | lineage4.9 | None | SRR1202538 | Sensitive | lineage4.9 | None | SRR1202741 | Sensitive | lineage4.9 | None | SRR1208342 | Other | lineage4.9 | None | SRR1208693 | Sensitive | lineage4.9 | None | SRR1208871 | Sensitive | lineage4.9 | None | SRR1180538 | Sensitive | lineage4.9 | None | SRR1181195 | Sensitive | lineage4.9 | None | SRR1181245 | Other | lineage4.9 | None | SRR1209005 | Sensitive | lineage4.9 | None | ERR181733 | Sensitive | lineage4.3.4.2.1 | None | SRR1183016 | Sensitive | lineage4.9 | None | SRR1181486 | Sensitive | lineage4.9 | None | SRR1208165 | Sensitive | lineage4.9 | None | SRR1183231 | Other | lineage4.9 | None | SRR1209019 | Sensitive | lineage4.9 | None | SRR1202656 | Sensitive | lineage4.9 | None | SRR1182992 | Other | lineage4.9 | None | SRR1180765 | Sensitive | lineage4.9 | None | SRR1181594 | Sensitive | lineage4.9 | None | SRR1208804 | Sensitive | lineage4.9 | None | SRR1180475 | Sensitive | lineage4.9 | None | SRR1202405 | Sensitive | lineage4.9 | None | SRR1183244 | Other | lineage4.9 | None | SRR1208648 | Sensitive | lineage4.9 | None | SRR1208551 | Other | lineage4.9 | None | SRR1181272 | Sensitive | lineage4.9 | None | SRR1180091 | Other | lineage4.9 | None | SRR1180815 | Other | lineage4.9 | None | SRR1183024 | Sensitive | lineage4.9 | None | SRR1208604 | Sensitive | lineage4.9 | None | SRR1182977 | Sensitive | lineage4.9 | None | SRR1202611 | Sensitive | lineage4.9 | None | SRR1208310 | Sensitive | lineage4.9 | None | SRR1209042 | Sensitive | lineage4.9 | None | SRR1202403 | Sensitive | lineage4.9 | None | SRR1208923 | Sensitive | lineage4.9 | None | SRR1181597 | Other | lineage4.9 | None | SRR1208577 | Other | lineage4.9 | None | SRR1181487 | Sensitive | lineage4.9 | None | SRR1183449 | Sensitive | lineage4.9 | None | SRR1208873 | Sensitive | lineage4.9 | None | SRR1183694 | Sensitive | lineage4.9 | None | SRR1208412 | Sensitive | lineage4.9 | None | SRR1208525 | Sensitive | lineage4.9 | None | SRR1183483 | Sensitive | lineage4.9 | None | SRR1208317 | Sensitive | lineage4.9 | None | SRR1183543 | Sensitive | lineage4.9 | None | SRR1208999 | Sensitive | lineage4.9 | None | SRR1208744 | Other | lineage4.9 | None | SRR1208585 | Sensitive | lineage4.9 | None | SRR1181200 | Sensitive | lineage4.9 | None | SRR1202583 | Sensitive | lineage4.9 | None | SRR1208803 | Sensitive | lineage4.9 | None | SRR1180459 | Other | lineage4.9 | None | SRR1183151 | Sensitive | lineage4.9 | None | SRR1208637 | Sensitive | lineage4.9 | None | SRR1180497 | Sensitive | lineage4.9 | None | SRR1180653 | Sensitive | lineage4.9 | None | SRR1181579 | Sensitive | lineage4.9 | None | SRR1209011 | Sensitive | lineage4.9 | None | SRR1180594 | Sensitive | lineage4.9 | None | SRR1181572 | Sensitive | lineage4.9 | None | SRR18053779 | Other | La1.7.1 | None | SRR1208645 | Sensitive | lineage4.9 | None | SRR1202413 | Sensitive | lineage4.9 | None | SRR1181270 | Sensitive | lineage4.9 | None | SRR1182909 | Other | lineage4.9 | None | SRR1208956 | Sensitive | lineage4.9 | None | SRR1208584 | Sensitive | lineage4.9 | None | SRR1209038 | Sensitive | lineage4.9 | None | SRR1180101 | Sensitive | lineage4.9 | None | SRR1183437 | Other | lineage4.9 | None | SRR1208506 | Sensitive | lineage4.9 | None | SRR1208479 | Sensitive | lineage4.9 | None | SRR1208927 | Sensitive | lineage4.9 | None | SRR1180692 | Sensitive | lineage4.9 | None | SRR1208533 | Sensitive | lineage4.9 | None | SRR1181581 | Sensitive | lineage4.9 | None | SRR1208815 | Sensitive | lineage4.9 | None | SRR1208249 | Sensitive | lineage4.9 | None | SRR1208450 | Sensitive | lineage4.9 | None | SRR1202430 | Sensitive | lineage4.9 | None | SRR1208301 | Sensitive | lineage4.9 | None | SRR1183200 | Sensitive | lineage4.9 | None | SRR1183223 | Sensitive | lineage4.9 | None | SRR1181189 | Other | lineage4.9 | None | SRR1181508 | Sensitive | lineage4.9 | None | SRR1208233 | Other | lineage4.9 | None | SRR1208675 | Sensitive | lineage4.9 | None | SRR1208555 | Sensitive | lineage4.9 | None | SRR1181143 | Other | lineage4.9 | None | SRR1202442 | Sensitive | lineage4.9 | None | SRR1202629 | Sensitive | lineage4.9 | None | SRR1208430 | Sensitive | lineage4.9 | None | SRR1208462 | Sensitive | lineage4.9 | None | SRR1208470 | Sensitive | lineage4.9 | None | SRR1209029 | Sensitive | lineage4.9 | None | SRR1208535 | Sensitive | lineage4.9 | None | SRR1208643 | Sensitive | lineage4.9 | None | SRR1208875 | Sensitive | lineage4.9 | None | SRR1209049 | Other | lineage4.9 | None | SRR1208398 | Sensitive | lineage4.9 | None | SRR1182904 | Sensitive | lineage4.9 | None | SRR1181588 | Sensitive | lineage4.9 | None | SRR1202622 | Sensitive | lineage4.9 | None | SRR1208431 | Sensitive | lineage4.9 | None | SRR1208432 | Sensitive | lineage4.9 | None | SRR1208574 | Sensitive | lineage4.9 | None | SRR1208870 | Sensitive | lineage4.9 | None | SRR1208335 | Sensitive | lineage4.9 | None | SRR1208370 | Sensitive | lineage4.9 | None | SRR1208879 | Sensitive | lineage4.9 | None | SRR1208924 | Sensitive | lineage4.9 | None | SRR1208613 | Sensitive | lineage4.9 | None | SRR1208789 | Sensitive | lineage4.9 | None | SRR1208885 | Sensitive | lineage4.9 | None | SRR1208849 | Sensitive | lineage4.9 | None | SRR1202662 | Sensitive | lineage4.9 | None | SRR1208978 | Sensitive | lineage4.9 | None | SRR1183276 | Other | lineage4.9 | None | SRR1202401 | Sensitive | lineage4.9 | None | SRR1208689 | Sensitive | lineage4.9 | None | SRR1183504 | Sensitive | lineage4.9 | None | SRR1202598 | Sensitive | lineage4.9 | None | SRR1208507 | Sensitive | lineage4.9 | None | SRR1180659 | Sensitive | lineage4.9 | None | SRR1202719 | Sensitive | lineage4.9 | None | SRR1208850 | Other | lineage4.9 | None | SRR1209041 | Sensitive | lineage4.9 | None | SRR1180543 | Sensitive | lineage4.9 | None | SRR1208447 | Sensitive | lineage4.9 | None | SRR1208534 | Sensitive | lineage4.9 | None | SRR1183606 | Sensitive | lineage4.9 | None | SRR1208194 | Other | lineage4.9 | None | SRR1183102 | Sensitive | lineage4.9 | None | SRR1183236 | Sensitive | lineage4.9 | None | SRR1183599 | Sensitive | lineage4.9 | None | SRR1202434 | Sensitive | lineage4.9 | None | SRR1202496 | Sensitive | lineage4.9 | None | SRR1202451 | Sensitive | lineage4.9 | None | SRR1183400 | Sensitive | lineage4.9 | None | SRR1208670 | Sensitive | lineage4.9 | None | SRR1208441 | Sensitive | lineage4.9 | None | SRR1181586 | Sensitive | lineage4.9 | None | SRR1183382 | Sensitive | lineage4.9 | None | SRR1181190 | Sensitive | lineage4.9 | None | SRR1180563 | Sensitive | lineage4.9 | None | SRR1182888 | Sensitive | lineage4.9 | None | SRR1182963 | Sensitive | lineage4.9 | None | SRR1208451 | Sensitive | lineage4.9 | None | SRR1182891 | Other | lineage4.9 | None | SRR1202557 | Sensitive | lineage4.9 | None | SRR1208764 | Sensitive | lineage4.9 | None | SRR1208695 | Sensitive | lineage4.9 | None | SRR1208785 | Sensitive | lineage4.9 | None | SRR1183718 | Sensitive | lineage4.9 | None | SRR1208639 | Other | lineage4.9 | None | SRR1180115 | Other | lineage4.9 | None | SRR1180123 | Sensitive | lineage4.9 | None | SRR1202726 | Sensitive | lineage4.9 | None | SRR5217421 | Sensitive | lineage2.2.1 | None | SRR1208794 | Sensitive | lineage4.9 | None | SRR1180124 | Sensitive | lineage4.9 | None | SRR1209035 | Sensitive | lineage4.9 | None | SRR1183421 | Sensitive | lineage4.9 | None | SRR1180214 | Sensitive | lineage4.9 | None | SRR1181144 | Sensitive | lineage4.9 | None | ERR752034 | Sensitive | lineage2.2.1 | None | SRR1183427 | Sensitive | lineage4.9 | None | SRR1208676 | Other | lineage4.9 | None | ERR245772 | Sensitive | lineage4.9.1 | None | SRR1208405 | Sensitive | lineage4.9 | None | SRR1208488 | Sensitive | lineage4.9 | None | SRR1208980 | Sensitive | lineage4.9 | None | SRR1209047 | Sensitive | lineage4.9 | None | SRR1182955 | Sensitive | lineage4.9 | None | SRR1202433 | Sensitive | lineage4.9 | None | SRR1209021 | Sensitive | lineage4.9 | None | SRR1183285 | Other | lineage4.9 | None | SRR1182966 | Sensitive | lineage4.9 | None | SRR1209030 | Sensitive | lineage4.9 | None | SRR1208882 | Sensitive | lineage4.9 | None | SRR1208919 | Sensitive | lineage4.9 | None | SRR1202380 | Sensitive | lineage4.9 | None | SRR1208567 | Sensitive | lineage4.9 | None | SRR1202605 | Sensitive | lineage4.9 | None | SRR1202432 | Sensitive | lineage4.9 | None | SRR1208673 | Sensitive | lineage4.9 | None | SRR1208563 | Sensitive | lineage4.9 | None | SRR1202396 | Other | lineage4.9 | None | SRR1183396 | Sensitive | lineage4.9 | None | SRR1208325 | Sensitive | lineage4.9 | None | SRR1208678 | Sensitive | lineage4.9 | None | SRR1208260 | Sensitive | lineage4.9 | None | SRR1208496 | Sensitive | lineage4.9 | None | SRR1180587 | Sensitive | lineage4.9 | None | SRR1183202 | Sensitive | lineage4.9 | None | SRR1181232 | Sensitive | lineage4.9 | None | SRR1183600 | Sensitive | lineage4.9 | None | SRR1183614 | Sensitive | lineage4.9 | None | SRR1180476 | Sensitive | lineage4.9 | None | SRR1202399 | Sensitive | lineage4.9 | None | SRR1202400 | Sensitive | lineage4.9 | None | ERR4769478 | Other | La1.2 | None | SRR1180095 | Other | lineage4.9 | None | SRR1183129 | Other | lineage4.9 | None | SRR1180466 | Sensitive | lineage4.9 | None | SRR1208270 | Sensitive | lineage4.9 | None | SRR1208338 | Sensitive | lineage4.9 | None | SRR1208686 | Sensitive | lineage4.9 | None | SRR1208666 | Other | lineage4.9 | None | SRR1208732 | Sensitive | lineage4.9 | None | SRR1181221 | Other | lineage4.9 | None | SRR1208448 | Sensitive | lineage4.9 | None | SRR1183395 | Other | lineage4.9 | None | SRR1202689 | Sensitive | lineage4.9 | None | SRR1208345 | Sensitive | lineage4.9 | None | SRR1180026 | Sensitive | lineage4.9 | None | SRR1208797 | Sensitive | lineage4.9 | None | SRR1208537 | Other | lineage4.9 | None | SRR1208463 | Sensitive | lineage4.9 | None | SRR1181244 | Other | lineage4.9 | None | SRR1183450 | Other | lineage4.9 | None | SRR1181359 | Sensitive | lineage4.9 | None | SRR1209087 | Sensitive | lineage4.9 | None | SRR1202452 | Sensitive | lineage4.9 | None |
---|