TB-Profiler
Home
Upload
SRA data
EBG00000313339
- n.-50_-49delGG
Drug resistance types
1 Sensitive
0 RR-TB
0 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
3 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7
1
M.canetti;lineage4.2
1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
1
La3;M.canetti;lineage2;lineage4.2;lineage4.3
1
lineage4.9
1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
1
La1.6;La3;M.canetti;lineage4.2.2
1
Showing 1 to 7 of 7 entries
Previous
1
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
7
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1035162
Other
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
None
ERR133986
Other
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
None
ERR158583
MDR-TB
La3;M.canetti;lineage2;lineage4.2;lineage4.3
None
ERR403298
MDR-TB
M.canetti;lineage4.2
None
SRR11662696
MDR-TB
La1.6;La3;M.canetti;lineage4.2.2
None
SRR3675502
Sensitive
lineage4.9
None
SRR5341418
Other
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7
None
Showing 1 to 7 of 7 entries
Previous
1
Next