Rv0001 - c.180T>C

Drug resistance types
42 Sensitive 1 RR-TB 3 HR-TB 8 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 6 Other
lineage Counts
lineage Count
lineage3 58
M.canetti;lineage2.1;lineage3 1
lineage3;lineage4.2.2.2 1
1
lineage1.1.1.1 1
lineage2.2.1 1
lineage3;lineage4.1 1
spoligotype Counts
spoligotype Count
None 64
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR27450592 Sensitive lineage3 None
SRR5341385 Pre-XDR-TB lineage3 in
ERR4800175 Sensitive lineage3 None
SRR1140738 Sensitive lineage3 None
SRR22179531 Other lineage3 None
SRR1049717 Sensitive lineage3 None
SRR22249647 HR-TB lineage3 None
SRR6797676 HR-TB lineage3 None
SRR6797601 Sensitive lineage3 None
SRR1062924 Sensitive lineage3 None
SRR28045588 Sensitive lineage3 None
SRR28045399 Sensitive lineage3 None
SRR28044880 Sensitive lineage3 None
SRR30182603 Sensitive lineage3 None
ERR2514892 Sensitive lineage3 gb
SRR1003114 Sensitive lineage3 None
ERR4819243 Sensitive lineage3 gb
SRR1003133 Sensitive lineage3 None
ERR2514011 Sensitive lineage3 gb
SRR25827333 MDR-TB lineage3 None
ERR4816894 MDR-TB lineage3 None
ERR11081358 Sensitive lineage3 None
SRR19428552 Other lineage3 None
ERR4797684 Sensitive lineage3 in
ERR4800204 Sensitive lineage3 in
ERR4798210 HR-TB lineage3 in
SRR1003115 Sensitive lineage3 None
SRR1049718 Sensitive lineage3 None
SRR26112100 Sensitive lineage3 None
SRR6797380 Sensitive lineage3 None
SRR4423147 Pre-XDR-TB lineage3 None
SRR22137386 Other lineage3 None
SRR6964514 Pre-XDR-TB lineage3 None
ERR4831045 Sensitive lineage3 np
SRR21690148 Other lineage3 None
ERR4797675 Sensitive lineage3 in
ERR4800655 MDR-TB lineage3 None
SAMN02360630 Sensitive lineage3 ug
ERR4797838 Sensitive lineage3 in
ERR4817365 MDR-TB lineage3 None
ERR4798214 Sensitive lineage3 in
ERR11049584 Sensitive lineage3 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR7069870 Sensitive lineage3 None
SRR19428561 Sensitive lineage3;lineage4.2.2.2 None
SRR28045884 Sensitive lineage3 None
ERR4553431 RR-TB None
ERR12790851 MDR-TB lineage1.1.1.1 None
SRR28351438 Pre-XDR-TB lineage3 None
SRR28045685 Sensitive lineage3 None
SRR29126420 Sensitive lineage3 None
SRR29441080 Other lineage3 None
SRR18910203 Other lineage3 None
ERR4798299 Sensitive lineage3 in
ERR4814477 MDR-TB lineage3 None
SAMN02381034 Sensitive lineage3 ug
SRR6458405 Sensitive lineage2.2.1 None
SAMN02360623 Sensitive lineage3 ug
SRR1003132 Sensitive lineage3 None
ERR2512830 Sensitive lineage3 gb
ERR4800040 Sensitive lineage3 in
SRR7070217 Sensitive lineage3 None
ERR4831068 Sensitive lineage3;lineage4.1 np
ERR4820576 MDR-TB lineage3 None