TB-Profiler
Home
Upload
SRA data
Rv0001
- c.654A>C
Drug resistance types
2 Sensitive
1 RR-TB
3 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
2
lineage4.8
2
lineage2.2.2
2
La1.7;lineage4.9
1
lineage2.2.1
1
Showing 1 to 5 of 5 entries
Previous
1
Next
spoligotype Counts
spoligotype
Count
None
8
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR4553488
HR-TB
lineage4.8
None
ERR473332
Other
lineage4.9
None
ERR4769474
HR-TB
lineage4.9
None
SRR21658760
Sensitive
lineage2.2.2
None
SRR29016813
MDR-TB
lineage4.8
None
SRR29052883
Sensitive
lineage2.2.2
None
SRR9971270
RR-TB
lineage2.2.1
None
Showing 1 to 8 of 8 entries
Previous
1
Next