Rv0001 - p.Ala465Thr
Drug resistance types
60 Sensitive
4 RR-TB
10 HR-TB
21 MDR-TB
5 Pre-XDR-TB
1 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.5 | 5 |
| lineage2.2.1 | 22 |
| lineage5.1.4 | 1 |
| lineage5.1.2 | 3 |
| lineage1.1.3.2 | 11 |
| lineage1.2.1.2.1 | 9 |
| lineage3.1.2 | 1 |
| lineage4 | 3 |
| lineage4.4.1.1 | 2 |
| lineage4.8 | 17 |
| lineage1.1.2 | 5 |
| lineage4.1.1.3 | 4 |
| lineage4.1.2.1 | 7 |
| lineage4.4.2 | 3 |
| lineage4.1.1.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.1.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage3 | 2 |
| lineage1.2.1.2.1;lineage4 | 1 |
| lineage2.2.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 109 |
Geographic prevalence
Country level data for this variant is available for 28 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR15723245 | MDR-TB | lineage4.5 | None | ERR2307639 | MDR-TB | lineage2.2.1 | None | ERR1203077 | Sensitive | lineage5.1.4 | gh | ERR017801 | Sensitive | lineage5.1.2 | None | ERR11044853 | Sensitive | lineage1.1.3.2 | None | ERR11044959 | Sensitive | lineage1.1.3.2 | None | ERR6865956 | Sensitive | lineage2.2.1 | None | ERR752205 | Other | lineage1.2.1.2.1 | th | ERR9125730 | HR-TB | lineage1.2.1.2.1 | None | SRR25340825 | Other | lineage3.1.2 | None | SRR21576593 | RR-TB | lineage4.5 | None | ERR551574 | Sensitive | lineage4 | de | SRR20969668 | Pre-XDR-TB | lineage2.2.1 | None | ERR9117720 | Sensitive | lineage2.2.1 | None | ERR11043920 | MDR-TB | lineage1.1.3.2 | None | ERR4809113 | Sensitive | lineage4.4.1.1 | za | SRR6824403 | MDR-TB | lineage2.2.1 | cn | ERR4830138 | HR-TB | lineage4.8 | None | ERR4818295 | HR-TB | lineage1.1.3.2 | gb | ERR4828132 | MDR-TB | lineage4.8 | None | SRR10305980 | MDR-TB | lineage2.2.1 | None | ERR11044874 | Sensitive | lineage1.1.3.2 | None | ERR3275560 | Sensitive | lineage1.1.3.2 | nl | SRR28389895 | Sensitive | lineage4.8 | None | SRR28044329 | Sensitive | lineage1.1.2 | None | SRR29440790 | RR-TB | lineage1.1.3.2 | None | SRR29681389 | MDR-TB | lineage4.8 | None | SRR30336521 | Sensitive | lineage1.2.1.2.1 | None | SAMN02419685 | MDR-TB | lineage2.2.1 | by | SRR1723792 | MDR-TB | lineage2.2.1 | cn | ERR2515088 | Sensitive | lineage1.1.2 | gb | SRR22873603 | XDR-TB | lineage2.2.1 | None | SRR14164429 | HR-TB | lineage4.4.1.1 | None | SRR11972185 | Sensitive | lineage1.1.2 | None | ERR4457812 | Sensitive | lineage4.1.1.3 | None | ERR1035102 | Pre-XDR-TB | lineage2.2.1 | vn | ERR4025045 | Sensitive | lineage4.1.2.1 | None | ERR4810737 | Sensitive | lineage4.4.2 | cn | ERR4798891 | Sensitive | lineage1.1.2 | in | ERR4809213 | Sensitive | lineage4.1.1.1 | za | ERR9125799 | Sensitive | lineage1.2.1.2.1 | None | ERR4024639 | Sensitive | lineage2.2.1 | None | SRR28119828 | MDR-TB | lineage4.5 | None | ERR9786336 | Other | lineage4.6.2.2 | None | ERR2516334 | Sensitive | lineage4.8 | be | ERR11081404 | MDR-TB | lineage4.8 | None | SRR21736371 | Sensitive | lineage4.4.2 | None | SRR15315958 | Other | lineage2.2.1 | None | ERR11050522 | Sensitive | lineage2.2.1 | None | ERR4178163 | Sensitive | lineage4.1.2.1 | None | ERR386976 | Sensitive | lineage4.1.1.3 | None | ERR6865448 | Sensitive | lineage4.1.2.1 | None | SRR1163407 | MDR-TB | lineage2.2.1 | None | SRR21277541 | Sensitive | lineage2.2.1 | None | ERR2516228 | Sensitive | lineage4 | be | ERR2513677 | Sensitive | lineage4.1.1.3 | gb | SRR16058013 | HR-TB | lineage1.2.1.2.1 | None | DRR184993 | Other | lineage4.1.2 | vn | SRR6807696 | HR-TB | lineage2.2.1 | None | SRR16627755 | Other | lineage1.2.2.2 | None | ERR10762251 | Pre-XDR-TB | lineage4.8 | None | SRR1172412 | MDR-TB | lineage2.2.1 | None | SRR7070151 | Sensitive | lineage1.1.2 | None | ERR3799598 | Other | lineage4.6.2.2 | None | ERR4816985 | Sensitive | lineage2.2.1 | gb | ERR4827551 | MDR-TB | lineage4.8 | None | ERR9786134 | Other | lineage4.1 | None | ERR4195686 | Sensitive | lineage4.1.2.1 | None | ERR6865614 | Sensitive | lineage4.1.2.1 | None | SRR21277474 | Sensitive | lineage2.2.1.1 | None | SRR1162977 | MDR-TB | lineage2.2.1 | None | SRR28046343 | RR-TB | lineage3 | None | SRR28389904 | Sensitive | lineage4.1.1.1 | None | SRR12006659 | Sensitive | lineage1.2.1.2.1;lineage4 | None | SRR16915706 | Sensitive | lineage4 | None | ERR4827788 | MDR-TB | lineage4.8 | None | ERR11043642 | Sensitive | lineage4.1.2.1 | None | SRR1049065 | Sensitive | lineage2.2.1 | None | SRR1168993 | MDR-TB | lineage2.2.1 | None | ERR6336774 | Sensitive | lineage1.2.1.2.1 | None | ERR019875 | Sensitive | lineage5.1.2 | None | DRR473925 | HR-TB | lineage2.2.2 | None | SRR21733146 | Sensitive | lineage4.5 | None | ERR11081544 | HR-TB | lineage4.8 | None | ERR752129 | HR-TB | lineage1.2.1.2.1 | th | SRR12006660 | Sensitive | lineage1.2.1.2.1 | None | ERR026642 | Sensitive | lineage5.1.2 | None | ERR2513368 | Sensitive | lineage1.1.3.2 | gb | ERR4024778 | Sensitive | lineage4.1.1.3 | None | ERR4827947 | MDR-TB | lineage4.8 | None | ERR11138655 | Pre-XDR-TB | lineage4.8 | None | SRR16058115 | Sensitive | lineage1.2.1.2.1 | None | ERR2446103 | Sensitive | lineage1.1.3.2 | nl | ERR4810752 | Sensitive | lineage4.4.2 | cn | ERR11775520 | Sensitive | lineage2.2.1.1 | None | SRR28239539 | Sensitive | lineage4.8 | None | SRR28046216 | Sensitive | lineage3 | None | SRR28393813 | Pre-XDR-TB | lineage4.8 | None | SRR28393775 | Sensitive | lineage4.1.2.1 | None | SRR29681477 | HR-TB | lineage4.8 | None | SRR14165137 | Sensitive | lineage4.8 | None | ERR4812245 | MDR-TB | lineage4.3.2 | pe | SRR21576704 | RR-TB | lineage4.5 | None | ERR2517302 | Sensitive | lineage1.1.3.2 | nl | ERR4799015 | Sensitive | lineage4.1.1.2 | in | ERR4831604 | MDR-TB | lineage2.2.1 | vn | SRR23339962 | MDR-TB | lineage4.8 | None | ERR221599 | Sensitive | lineage4.6 | mw | SRR12882343 | Sensitive | lineage1.1.3.2 | None |
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