lineage | Count |
---|---|
lineage2.2.1 | 18 |
lineage1.1.2 | 2 |
lineage3.1.2.1 | 2 |
lineage4.1.2.1 | 4 |
lineage2.2.1.1 | 4 |
lineage1.2.1.2.1 | 1 |
lineage4.9 | 4 |
lineage4.3.3 | 4 |
lineage4.1.2 | 2 |
lineage4.3.4.2.1 | 1 |
lineage4.3.4.1 | 1 |
lineage4.5 | 2 |
lineage2.2 | 1 |
lineage4.1.2.1.1 | 1 |
lineage4.8 | 4 |
lineage4.1 | 1 |
lineage4.3.4.2 | 3 |
lineage2.2.1.2 | 2 |
lineage3.1.2 | 1 |
lineage2.2.2 | 2 |
lineage6.3.1 | 1 |
lineage3 | 1 |
lineage4.1.1.1 | 1 |
lineage1.1 | 1 |
spoligotype | Count |
---|---|
None | 64 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR1723548 | MDR-TB | lineage2.2.1 | cn |
SRR6046575 | Sensitive | lineage1.1.2 | gb |
SRR15014668 | RR-TB | lineage2.2.1 | None |
ERR270749 | HR-TB | lineage3.1.2.1 | None |
ERR4812446 | HR-TB | lineage4.1.2.1 | pe |
SRR16101281 | HR-TB | lineage2.2.1 | None |
ERR031481 | HR-TB | lineage2.2.1.1 | None |
ERR4818041 | Sensitive | lineage1.2.1.2.1 | gb |
ERR067712 | Sensitive | lineage4.9 | None |
ERR13291276 | Sensitive | lineage4.3.3 | None |
SRR16370453 | MDR-TB | lineage4.1.2 | None |
ERR245787 | Sensitive | lineage4.3.4.2.1 | mw |
SRR6982341 | HR-TB | lineage2.2.1 | None |
ERR2509883 | Other | lineage2.2.1 | gb |
SRR29096627 | RR-TB | lineage4.3.4.1 | None |
ERR12268466 | Sensitive | lineage4.1.2.1 | None |
SRR21277732 | Sensitive | lineage4.5 | None |
ERR5865893 | MDR-TB | lineage2.2.1 | None |
ERR4553635 | MDR-TB | lineage2.2 | None |
ERR760749 | MDR-TB | lineage4.1.2.1.1 | ar |
SRR1723469 | MDR-TB | lineage2.2.1 | cn |
ERR13292013 | HR-TB | lineage2.2.1 | None |
ERR4830241 | HR-TB | lineage2.2.1 | None |
ERR4553486 | MDR-TB | lineage4.8 | None |
ERR234588 | Sensitive | lineage4.1 | ru |
ERR4188247 | HR-TB | lineage4.9 | None |
ERR2653135 | MDR-TB | lineage4.3.4.2 | None |
ERR4817667 | HR-TB | lineage4.8 | None |
SRR29385436 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29053262 | MDR-TB | lineage4.1.2 | None |
SRR29017406 | MDR-TB | lineage4.8 | None |
SRR16089640 | Sensitive | lineage4.3.3 | None |
ERR13289626 | Sensitive | lineage1.1.2 | None |
ERR2653092 | Pre-XDR-TB | lineage4.3.4.2 | None |
SRR6824456 | MDR-TB | lineage2.2.1 | cn |
SRR26399454 | HR-TB | lineage2.2.1 | None |
SRR21239789 | Sensitive | lineage4.1.2.1 | None |
ERR4814639 | HR-TB | lineage4.9 | None |
SRR25207209 | Pre-XDR-TB | lineage2.2.1.2 | None |
SRR14782498 | Sensitive | lineage2.2.1 | None |
ERR4800069 | Sensitive | lineage3.1.2 | in |
ERR13276025 | MDR-TB | lineage4.3.3 | None |
ERR9119788 | MDR-TB | lineage2.2.1.1 | None |
ERR4829743 | Sensitive | lineage4.1.2.1 | None |
SRR2100851 | HR-TB | lineage3.1.2.1 | None |
SRR2101530 | HR-TB | lineage2.2.1 | None |
SRR6824452 | MDR-TB | lineage2.2.1 | cn |
ERR4811370 | Pre-XDR-TB | lineage2.2.1.2 | cn |
ERR8773654 | HR-TB | lineage2.2.1 | None |
ERR234256 | HR-TB | lineage2.2.1.1 | us |
SRR29914412 | MDR-TB | lineage2.2.2 | None |
SRR29017146 | MDR-TB | lineage2.2.2 | None |
ERR4827729 | RR-TB | lineage4.5 | None |
ERR2653117 | Pre-XDR-TB | lineage4.3.4.2 | None |
SRR5067680 | Sensitive | lineage4.8 | vn |
SRR29093920 | Pre-XDR-TB | lineage2.2.1 | None |
ERR3801658 | Sensitive | lineage6.3.1 | None |
ERR4819546 | HR-TB | lineage3 | None |
ERR11067559 | HR-TB | lineage4.3.3 | None |
ERR4815815 | Sensitive | lineage4.9 | None |
ERR2653219 | MDR-TB | lineage4.1.1.1 | None |
ERR718288 | HR-TB | lineage1.1 | th |
ERR8774372 | MDR-TB | lineage2.2.1 | None |
ERR5987214 | MDR-TB | lineage2.2.1.1 | None |