Rv0005 - c.1303_1305delATCinsCG


Drug resistance types
0 Sensitive 1 RR-TB 10 HR-TB 12 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 15 Other
lineage Counts
lineage Count
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.1 1
La3;lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.9 3
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 2
lineage2.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 5
lineage4.2;lineage4.8.1;lineage4.9 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.1.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9 2
lineage4.6.2.2 1
La1.7;lineage4.9 2
4
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.1.1.3 1
lineage4.2;lineage4.9 2
spoligotype Counts
spoligotype Count
None 38
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR702406 Other lineage2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR28119805 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786604 Other None
SRR6789626 Other None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR6046133 HR-TB lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR11465024 Other lineage4.1.1.3 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR9786671 Other None
ERR9787197 Other None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None