Rv0005 - p.Arg446His
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
0 MDR-TB
83 Pre-XDR-TB
7 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 4 |
| lineage2.2.1 | 31 |
| lineage2.2.2 | 6 |
| lineage3.1.2 | 4 |
| lineage4.9 | 3 |
| lineage4.3.3 | 16 |
| lineage1.2.2.2 | 2 |
| lineage2.2.1.1 | 12 |
| lineage4.1.1 | 4 |
| lineage4.1.1.3 | 2 |
| lineage2.2.1;lineage3 | 2 |
| lineage4.2.1 | 3 |
| lineage2.2.1;lineage4.2.2.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.5 | 1 |
| lineage3 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11488550 | Pre-XDR-TB | lineage4.8 | None | SRR28923837 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748267 | XDR-TB | lineage2.2.2 | None | ERR4799822 | Pre-XDR-TB | lineage2.2.1 | in | ERR4815241 | Other | lineage3.1.2 | gb | SRR4423142 | Pre-XDR-TB | lineage4.9 | None | SRR25827338 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969922 | Pre-XDR-TB | lineage2.2.2 | None | SRR28045446 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207240 | Pre-XDR-TB | lineage2.2.1 | None | ERR7910878 | Pre-XDR-TB | lineage4.3.3 | pe | SRR28351527 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR7910996 | Pre-XDR-TB | lineage4.3.3 | pe | ERR4829525 | Pre-XDR-TB | lineage4.3.3 | it | ERR4830961 | Pre-XDR-TB | lineage2.2.1 | np | ERR8665902 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824693 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR6824696 | Pre-XDR-TB | lineage2.2.1.1 | cn | ERR11488412 | Pre-XDR-TB | lineage4.8 | None | SRR28394037 | Pre-XDR-TB | lineage4.1.1 | None | SRR21576711 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992913 | XDR-TB | lineage1.2.2.2 | None | ERR10748273 | Pre-XDR-TB | lineage4.3.3 | None | ERR2516270 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207359 | Pre-XDR-TB | lineage2.2.1 | None | SRR6484996 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723706 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR1723707 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR1723688 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR1723685 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR1723684 | Pre-XDR-TB | lineage2.2.1.1 | cn | ERR13260884 | XDR-TB | lineage2.2.2 | None | ERR2020075 | Pre-XDR-TB | lineage2.2.1 | None | SRR19276644 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR3105800 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR7645923 | Pre-XDR-TB | lineage4.2.1 | None | ERR4553827 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827562 | XDR-TB | lineage2.2.1;lineage4.2.2.2 | None | ERR13261615 | Pre-XDR-TB | lineage4.1.1 | None | ERR13266509 | XDR-TB | lineage2.2.1 | None | SRR9738488 | Pre-XDR-TB | lineage4.8 | None | ERR4827914 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797735 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799850 | Pre-XDR-TB | lineage2.2.1 | in | SRR6152894 | Other | lineage4.9 | ca | ERR4812196 | Pre-XDR-TB | lineage4.3.3 | pe | SRR26937013 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813212 | Pre-XDR-TB | lineage4.3.2 | pe | ERR4813011 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR7910863 | Pre-XDR-TB | lineage4.3.3 | pe | ERR4829956 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11773752 | Pre-XDR-TB | lineage4.3.3 | None | SRR21279414 | Pre-XDR-TB | lineage2.2.2 | None | ERR4799276 | Pre-XDR-TB | lineage2.2.1 | in | SRR11348171 | Other | lineage4.1.1.3 | None | SRR20969868 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819636 | Other | lineage3.1.2 | None | SRR29093109 | Pre-XDR-TB | lineage2.2.2 | None | SRR10305994 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR5865734 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887687 | Pre-XDR-TB | lineage2.2.1 | None | SRR4423180 | Pre-XDR-TB | lineage2.2.1 | None | ERR10867785 | Pre-XDR-TB | lineage4.3.3 | None | ERR4798119 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797601 | Pre-XDR-TB | lineage2.2.1 | in | SRR9971169 | Pre-XDR-TB | lineage4.3.3 | None | ERR12118051 | Pre-XDR-TB | lineage4.3.3 | None | ERR4799873 | Pre-XDR-TB | lineage2.2.1 | in | ERR4553668 | Pre-XDR-TB | lineage4.9 | None | ERR4813361 | Pre-XDR-TB | lineage4.1.1 | None | SRR28045236 | Pre-XDR-TB | lineage2.2.1 | None | SRR22461602 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992704 | Pre-XDR-TB | lineage4.3.3 | None | ERR400517 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2516499 | Pre-XDR-TB | lineage4.1.1 | pe | SRR6824366 | Pre-XDR-TB | lineage4.5 | cn | SRR6824305 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR6824313 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR6824314 | Pre-XDR-TB | lineage2.2.1.1 | cn | ERR10748272 | Pre-XDR-TB | lineage4.3.3 | None | SRR5065291 | Other | lineage2.2.1 | vn | SRR16370487 | Pre-XDR-TB | lineage4.3.3 | None | SRR22461643 | Pre-XDR-TB | lineage4.3.3 | None | SRR3105783 | Pre-XDR-TB | lineage3 | None | SRR3743390 | Pre-XDR-TB | lineage4.2.1 | None | SRR10379950 | Pre-XDR-TB | lineage4.2.1 | None | SRR786669 | Pre-XDR-TB | lineage3.1.2 | None | SRR21887652 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488642 | Pre-XDR-TB | lineage4.8 | None | ERR5865733 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992684 | XDR-TB | lineage2.2.2 | None | ERR11488955 | Pre-XDR-TB | lineage4.7 | None | SRR25827669 | XDR-TB | lineage2.2.1;lineage3 | None | SRR10305995 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4819246 | Other | lineage3.1.2 | None | SRR16370497 | Pre-XDR-TB | lineage4.3.3 | None |
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