| lineage | Count |
|---|---|
| lineage2.2.2 | 330 |
| lineage2.2.1;lineage2.2.2 | 5 |
| lineage1.2.2.2 | 1 |
| lineage2.2.2;lineage4 | 1 |
| lineage1.1.2 | 1 |
| spoligotype | Count |
|---|---|
| None | 338 |
| ID | Drug resistance | Lineage | Country iso2 | SRR29017395 | MDR-TB | lineage2.2.2 | None | SRR29017383 | MDR-TB | lineage2.2.2 | None | SRR29017122 | MDR-TB | lineage2.2.2 | None | SRR25206912 | MDR-TB | lineage2.2.2 | None | SRR5065580 | Other | lineage2.2.2 | vn | SRR21277221 | Sensitive | lineage2.2.1;lineage2.2.2 | None | SRR5067374 | HR-TB | lineage2.2.1;lineage2.2.2 | vn | SRR11972287 | MDR-TB | lineage2.2.2 | None | SRR1013623 | Pre-XDR-TB | lineage2.2.2 | None | SRR11662410 | HR-TB | lineage2.2.2 | None | SRR25515487 | Pre-XDR-TB | lineage2.2.2 | None | SRR10040204 | Pre-XDR-TB | lineage2.2.2 | None | SRR21291146 | Sensitive | lineage2.2.2 | None | SRR10040138 | MDR-TB | lineage2.2.2 | None | SRR25515349 | MDR-TB | lineage2.2.2 | None | SRR20632779 | Pre-XDR-TB | lineage2.2.2 | None | SRR29017533 | Pre-XDR-TB | lineage2.2.2 | None | SRR21277127 | Other | lineage2.2.2 | None | SRR21710925 | Sensitive | lineage1.2.2.2 | None | SRR12062556 | HR-TB | lineage2.2.2 | None | SRR17787495 | Sensitive | lineage2.2.2 | None | SRR4423153 | Pre-XDR-TB | lineage2.2.2 | None | SRR29017151 | MDR-TB | lineage2.2.2 | None | SRR15369071 | Sensitive | lineage2.2.2 | None | ERR3275945 | Sensitive | lineage2.2.2 | nl | SRR5535700 | Sensitive | lineage2.2.2 | None | SRR1723431 | Pre-XDR-TB | lineage2.2.2 | cn | SRR29914412 | MDR-TB | lineage2.2.2 | None | ERR13291025 | MDR-TB | lineage2.2.2 | None | SRR15316540 | Sensitive | lineage2.2.2 | None | ERR13291052 | MDR-TB | lineage2.2.2 | None | SRR29017174 | MDR-TB | lineage2.2.2 | None | SRR25515552 | Sensitive | lineage2.2.2 | None | SRR11972341 | Pre-XDR-TB | lineage2.2.2 | None | SRR28119725 | HR-TB | lineage2.2.2 | None | SRR29017417 | MDR-TB | lineage2.2.2 | None | SRR10828188 | MDR-TB | lineage2.2.2 | None | ERR13194019 | Pre-XDR-TB | lineage2.2.2 | None | SRR29017146 | MDR-TB | lineage2.2.2 | None | SRR21277392 | Sensitive | lineage2.2.2 | None | ERR13194094 | Pre-XDR-TB | lineage2.2.2 | None | SRR22249438 | Sensitive | lineage2.2.2 | None | SRR25207353 | Pre-XDR-TB | lineage2.2.2 | None | SRR4423139 | Pre-XDR-TB | lineage2.2.2 | None | SRR29017656 | MDR-TB | lineage2.2.2 | None | SRR10040549 | Pre-XDR-TB | lineage2.2.2 | None | SRR25207233 | MDR-TB | lineage2.2.2 | None | SRR21685109 | Sensitive | lineage2.2.2 | None | SRR21887737 | MDR-TB | lineage2.2.2 | None | SRR29017412 | MDR-TB | lineage2.2.2 | None | SRR29017045 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002875 | MDR-TB | lineage2.2.2;lineage4 | None | SRR29055484 | Sensitive | lineage2.2.2 | None | ERR13194001 | Pre-XDR-TB | lineage2.2.2 | None | ERR13235265 | MDR-TB | lineage2.2.2 | None | SRR28119719 | MDR-TB | lineage2.2.2 | None | SRR2063843 | RR-TB | lineage2.2.2 | None | ERR13291027 | MDR-TB | lineage2.2.2 | None | SRR29056190 | HR-TB | lineage2.2.2 | None | SRR18002921 | Sensitive | lineage2.2.2 | None | SRR25207090 | Pre-XDR-TB | lineage2.2.2 | None | SRR25207112 | MDR-TB | lineage2.2.2 | None | SRR26399155 | HR-TB | lineage2.2.2 | None | SRR25206863 | MDR-TB | lineage2.2.2 | None | SRR29017009 | MDR-TB | lineage2.2.2 | None | SRR29017166 | MDR-TB | lineage2.2.2 | None | SRR28119778 | Pre-XDR-TB | lineage2.2.2 | None | SRR29017124 | MDR-TB | lineage2.2.2 | None | SRR29017613 | Pre-XDR-TB | lineage2.2.2 | None | SRR29017176 | MDR-TB | lineage2.2.2 | None | SRR29093378 | MDR-TB | lineage2.2.2 | None | SRR18911882 | Sensitive | lineage2.2.2 | None | SRR21277709 | Sensitive | lineage2.2.2 | None | SRR6280251 | RR-TB | lineage2.2.2 | cn | ERR4810576 | MDR-TB | lineage2.2.2 | cn | SRR8651558 | XDR-TB | lineage2.2.2 | cn | SRR21887657 | Pre-XDR-TB | lineage2.2.2 | None | SRR8651641 | Pre-XDR-TB | lineage2.2.2 | cn | ERR4811082 | Sensitive | lineage2.2.2 | cn | ERR4810851 | Pre-XDR-TB | lineage2.2.2 | cn | SRR26139259 | Other | lineage2.2.2 | None | ERR13291082 | HR-TB | lineage2.2.2 | None | ERR4811282 | Pre-XDR-TB | lineage2.2.2 | cn | ERR4811328 | Pre-XDR-TB | lineage2.2.2 | cn | SRR26139258 | Sensitive | lineage2.2.2 | None | ERR4821780 | HR-TB | lineage2.2.2 | gb | SRR25389498 | HR-TB | lineage2.2.2 | None | DRR185111 | Sensitive | lineage2.2.2 | vn | SRR5065328 | Other | lineage2.2.2 | vn | SRR25207263 | Pre-XDR-TB | lineage2.2.2 | None | SRR28119832 | Pre-XDR-TB | lineage2.2.2 | None | SRR16370317 | Other | lineage2.2.2 | None | SRR15315874 | Sensitive | lineage2.2.2 | None | SRR15723172 | Pre-XDR-TB | lineage2.2.2 | None | SRR1723435 | MDR-TB | lineage2.2.2 | None | SRR2063844 | RR-TB | lineage2.2.2 | None | SRR18511626 | Sensitive | lineage2.2.2 | None | SRR30180428 | MDR-TB | lineage2.2.2 | None | ERR552157 | Pre-XDR-TB | lineage2.2.2 | None | SRR15315720 | Sensitive | lineage2.2.2 | None | SRR10040353 | MDR-TB | lineage2.2.2 | None | SRR18054802 | MDR-TB | lineage2.2.2 | None | SRR21676523 | HR-TB | lineage2.2.2 | None | ERR4810482 | Pre-XDR-TB | lineage2.2.2 | cn | SRR2062305 | RR-TB | lineage2.2.2 | None | SRR25515877 | Sensitive | lineage2.2.2 | None | SRR15316249 | Sensitive | lineage2.2.2 | None | SRR15316072 | Sensitive | lineage2.2.2 | None | SRR25207076 | Pre-XDR-TB | lineage2.2.2 | None | SRR15315703 | Sensitive | lineage2.2.2 | None | SRR1723430 | MDR-TB | lineage2.2.2 | cn | SRR1723434 | MDR-TB | lineage2.2.2 | cn | SRR1723429 | Sensitive | lineage2.2.2 | cn | SRR10305623 | Pre-XDR-TB | lineage2.2.2 | None | SRR25389500 | HR-TB | lineage2.2.2 | None | SRR14519152 | RR-TB | lineage2.2.2 | None | SRR29017712 | MDR-TB | lineage2.2.2 | None | SRR26112222 | Sensitive | lineage2.2.2 | None | SRR20969598 | MDR-TB | lineage2.2.2 | None | SRR10305690 | Sensitive | lineage2.2.2 | None | SRR29017689 | MDR-TB | lineage2.2.2 | None | SRR15316167 | HR-TB | lineage2.2.2 | None | ERR13193980 | XDR-TB | lineage2.2.2 | None | SRR25389495 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013624 | Pre-XDR-TB | lineage2.2.2 | None | SRR23691441 | Sensitive | lineage2.2.2 | None | SRR26399171 | HR-TB | lineage2.2.2 | None | SRR29052742 | Other | lineage2.2.2 | None | SRR15723175 | Pre-XDR-TB | lineage2.2.2 | None | SRR29017609 | Pre-XDR-TB | lineage2.2.2 | None | ERR13292341 | Sensitive | lineage2.2.2 | None | SRR29017685 | MDR-TB | lineage2.2.2 | None | SRR29341539 | Pre-XDR-TB | lineage2.2.2 | None | SRR10040545 | MDR-TB | lineage2.2.2 | None | SRR21747011 | RR-TB | lineage2.2.2 | None | SRR29017123 | Pre-XDR-TB | lineage2.2.2 | None | SRR10040250 | XDR-TB | lineage2.2.2 | None | SRR29385484 | Pre-XDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR29016889 | Pre-XDR-TB | lineage2.2.2 | None | SRR10040475 | Pre-XDR-TB | lineage2.2.2 | None | SRR27069410 | Pre-XDR-TB | lineage2.2.2 | None | SRR21676936 | Sensitive | lineage2.2.2 | None | ERR13245345 | Pre-XDR-TB | lineage2.2.2 | None | ERR13194018 | Pre-XDR-TB | lineage2.2.2 | None | ERR13291090 | MDR-TB | lineage2.2.2 | None | SRR28868625 | Sensitive | lineage2.2.2 | None | SRR28860084 | Sensitive | lineage2.2.2 | None | SRR18003043 | Pre-XDR-TB | lineage2.2.2 | None | SRR10040266 | MDR-TB | lineage2.2.2 | None | SRR21277564 | Sensitive | lineage2.2.2 | None | SRR26112454 | Sensitive | lineage2.2.2 | None | ERR13245251 | Pre-XDR-TB | lineage2.2.2 | None | SRR20969816 | HR-TB | lineage2.2.2 | None | SRR6480565 | HR-TB | lineage2.2.2 | None | ERR13291096 | MDR-TB | lineage2.2.2 | None | SRR28385883 | MDR-TB | lineage2.2.2 | None | ERR2020044 | Pre-XDR-TB | lineage2.2.2 | None | SRR28859774 | Sensitive | lineage2.2.2 | None | SRR29052795 | MDR-TB | lineage2.2.2 | None | SRR18054779 | MDR-TB | lineage2.2.2 | None | SRR25389494 | Pre-XDR-TB | lineage2.2.2 | None | SRR28170816 | MDR-TB | lineage2.2.2 | None | ERR13245229 | Pre-XDR-TB | lineage2.2.2 | None | SRR29017639 | MDR-TB | lineage2.2.2 | None | SRR23691420 | MDR-TB | lineage2.2.2 | None | SRR671857 | MDR-TB | lineage2.2.2 | cn | SRR15368862 | MDR-TB | lineage2.2.2 | None | ERR718221 | Sensitive | lineage2.2.2 | th | SRR25534335 | MDR-TB | lineage2.2.2 | None | SRR28467049 | Pre-XDR-TB | lineage2.2.2 | None | SRR25515235 | Sensitive | lineage2.2.2 | None | SRR25389496 | MDR-TB | lineage2.2.2 | None | ERR502885 | XDR-TB | lineage2.2.2 | None | SRR10040304 | MDR-TB | lineage2.2.2 | None | ERR4811604 | Sensitive | lineage2.2.2 | cn | ERR4810517 | Sensitive | lineage2.2.2 | cn | ERR538428 | Sensitive | lineage2.2.2 | None | SRR15316535 | Sensitive | lineage2.2.2 | None | SRR28119839 | MDR-TB | lineage2.2.2 | None | SRR25515226 | MDR-TB | lineage2.2.2 | None | SRR18003014 | Sensitive | lineage2.2.2 | None | SRR4423146 | Pre-XDR-TB | lineage2.2.2 | None | SRR21887689 | MDR-TB | lineage2.2.2 | None | SRR12006634 | Sensitive | lineage2.2.2 | None | SRR5709759 | Pre-XDR-TB | lineage2.2.2 | th | SRR5837711 | MDR-TB | lineage2.2.2 | th | SRR6280263 | RR-TB | lineage2.2.2 | cn | SRR6280311 | MDR-TB | lineage2.2.2 | cn | SRR6280305 | MDR-TB | lineage2.2.2 | cn | SRR6280264 | RR-TB | lineage2.2.2 | cn | SRR6280216 | RR-TB | lineage2.2.2 | cn | SRR6280137 | RR-TB | lineage2.2.2 | cn | SAMEA2533759 | Sensitive | lineage2.2.2 | de | SRR6824522 | MDR-TB | lineage2.2.2 | cn | SRR1049010 | Pre-XDR-TB | lineage2.2.2 | None | SRR6824659 | Sensitive | lineage2.2.2 | cn | SRR20632807 | Pre-XDR-TB | lineage2.2.2 | None | SRR20969426 | Pre-XDR-TB | lineage2.2.2 | None | SRR4423148 | Pre-XDR-TB | lineage2.2.2 | None | ERR1352346 | RR-TB | lineage2.2.2 | cn | ERR1352345 | RR-TB | lineage2.2.2 | cn | ERR1352347 | RR-TB | lineage2.2.2 | cn | ERR1352348 | RR-TB | lineage2.2.2 | cn | ERR1352349 | RR-TB | lineage2.2.2 | cn | SRR12062555 | HR-TB | lineage2.2.2 | None | SRR20969412 | Sensitive | lineage2.2.2 | None | SRR28385877 | MDR-TB | lineage2.2.2 | None | SRR29093370 | MDR-TB | lineage2.2.2 | None | SRR11567804 | XDR-TB | lineage2.2.2 | None | SRR10305775 | Sensitive | lineage2.2.2 | None | SRR25515040 | Sensitive | lineage2.2.2 | None | SRR5067716 | Other | lineage2.2.2 | vn | SRR5073643 | Sensitive | lineage2.2.2 | vn | SRR5073809 | Sensitive | lineage2.2.1;lineage2.2.2 | vn | SRR5074122 | HR-TB | lineage2.2.2 | vn | SRR28045256 | RR-TB | lineage2.2.2 | None | SRR28385879 | HR-TB | lineage2.2.2 | None | SRR25515489 | Sensitive | lineage2.2.2 | None | DRR130232 | Sensitive | lineage2.2.2 | None | ERR13194009 | Pre-XDR-TB | lineage2.2.2 | None | SRR4423174 | Pre-XDR-TB | lineage2.2.2 | None | SRR25207296 | MDR-TB | lineage2.2.2 | None | SRR25515189 | Other | lineage2.2.2 | None | SRR10209206 | Sensitive | lineage2.2.2 | None | SRR15315883 | Sensitive | lineage2.2.2 | None | ERR551184 | Sensitive | lineage2.2.2 | None | ERR4810477 | Pre-XDR-TB | lineage2.2.2 | cn | ERR551185 | Sensitive | lineage2.2.2 | None | ERR4810636 | Sensitive | lineage2.2.2 | cn | SRR18511606 | Sensitive | lineage2.2.2 | None | SRR3724760 | Sensitive | lineage2.2.2 | None | SRR26112813 | Sensitive | lineage2.2.2 | None | SRR17787600 | Sensitive | lineage2.2.2 | None | SRR21277322 | Sensitive | lineage2.2.2 | None | SRR15316476 | MDR-TB | lineage2.2.2 | None | SRR25206917 | Pre-XDR-TB | lineage2.2.2 | None | SRR11972235 | MDR-TB | lineage2.2.2 | None | SRR10040188 | Pre-XDR-TB | lineage2.2.2 | None | SRR10305687 | Sensitive | lineage2.2.2 | None | SRR15316534 | HR-TB | lineage2.2.2 | None | ERR13245559 | Pre-XDR-TB | lineage2.2.2 | None | ERR13290993 | MDR-TB | lineage2.2.2 | None | ERR13194076 | Pre-XDR-TB | lineage2.2.2 | None | SRR1723437 | MDR-TB | lineage2.2.2 | cn | SRR29017225 | MDR-TB | lineage2.2.2 | None | SRR1723436 | Sensitive | lineage2.2.2 | cn | SRR1723432 | Sensitive | lineage2.2.2 | cn | SRR29017145 | MDR-TB | lineage2.2.2 | None | SRR29050702 | HR-TB | lineage2.2.2 | None | SRR30182333 | Sensitive | lineage2.2.2 | None | SRR10040313 | MDR-TB | lineage2.2.2 | None | SRR8651653 | Pre-XDR-TB | lineage2.2.2 | cn | SRR10040403 | MDR-TB | lineage2.2.2 | None | SRR20969743 | Sensitive | lineage2.2.2 | None | ERR13291323 | Sensitive | lineage2.2.2 | None | SRR21277072 | Sensitive | lineage2.2.2 | None | SRR29017237 | Pre-XDR-TB | lineage2.2.2 | None | SRR28858448 | Sensitive | lineage1.1.2 | None | SRR23691341 | Sensitive | lineage2.2.2 | None | SRR2063842 | RR-TB | lineage2.2.2 | None | SRR21277307 | Sensitive | lineage2.2.2 | None | SRR29017020 | Pre-XDR-TB | lineage2.2.2 | None | SRR15316156 | HR-TB | lineage2.2.2 | None | SRR12062557 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR29441090 | HR-TB | lineage2.2.2 | None | SRR5894884 | XDR-TB | lineage2.2.2 | None | ERR11068464 | Sensitive | lineage2.2.2 | None | SRR29017708 | MDR-TB | lineage2.2.2 | None | SRR25207198 | Pre-XDR-TB | lineage2.2.2 | None | SRR13232479 | Sensitive | lineage2.2.2 | None | SRR2063840 | RR-TB | lineage2.2.2 | None | SRR29016888 | MDR-TB | lineage2.2.2 | None | SRR18511612 | Sensitive | lineage2.2.2 | None | SRR29093924 | Pre-XDR-TB | lineage2.2.2 | None | SRR29017408 | MDR-TB | lineage2.2.2 | None | SRR29772806 | MDR-TB | lineage2.2.2 | None | SRR22873596 | Pre-XDR-TB | lineage2.2.2 | None | SRR29016967 | Pre-XDR-TB | lineage2.2.2 | None | SRR29017142 | MDR-TB | lineage2.2.2 | None | SRR29017152 | Pre-XDR-TB | lineage2.2.2 | None | SRR29772727 | Pre-XDR-TB | lineage2.2.2 | None | SRR16115084 | Sensitive | lineage2.2.2 | None | SRR20969645 | Pre-XDR-TB | lineage2.2.2 | None | SRR20632817 | Pre-XDR-TB | lineage2.2.2 | None | SRR29017096 | MDR-TB | lineage2.2.2 | None | SRR29772372 | MDR-TB | lineage2.2.2 | None | SRR29016818 | Pre-XDR-TB | lineage2.2.2 | None | SRR21690572 | Sensitive | lineage2.2.2 | None | ERR9634292 | Sensitive | lineage2.2.2 | None | SRR25515528 | Pre-XDR-TB | lineage2.2.2 | None | SRR1723433 | Sensitive | lineage2.2.2 | None | SRR18511651 | Sensitive | lineage2.2.2 | None | ERR2027254 | HR-TB | lineage2.2.2 | None | SRR21279424 | Sensitive | lineage2.2.2 | None | SRR21576701 | MDR-TB | lineage2.2.2 | None | ERR11068927 | Sensitive | lineage2.2.2 | None | SAMN02360592 | Pre-XDR-TB | lineage2.2.2 | kr | ERR13291053 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049009 | Pre-XDR-TB | lineage2.2.2 | None | SRR6824395 | Sensitive | lineage2.2.2 | cn | SRR25515396 | Sensitive | lineage2.2.2 | None | SRR29017439 | MDR-TB | lineage2.2.2 | None | SRR26112393 | Sensitive | lineage2.2.2 | None | SRR22873608 | Pre-XDR-TB | lineage2.2.2 | None | SRR28045962 | Sensitive | lineage2.2.2 | None | SRR10828192 | Pre-XDR-TB | lineage2.2.2 | None | SRR25389493 | Pre-XDR-TB | lineage2.2.2 | None | SRR28385878 | MDR-TB | lineage2.2.2 | None | ERR718540 | Sensitive | lineage2.2.2 | th | ERR4828461 | HR-TB | lineage2.2.2 | vn | SRR8651606 | Pre-XDR-TB | lineage2.2.2 | None | SRR2024893 | MDR-TB | lineage2.2.2 | cn | ERR4810983 | MDR-TB | lineage2.2.2 | cn | SRR25628558 | Sensitive | lineage2.2.2 | None | SRR21279414 | Pre-XDR-TB | lineage2.2.2 | None | ERR552158 | Pre-XDR-TB | lineage2.2.2 | None | SRR13180293 | Sensitive | lineage2.2.2 | None | SRR12142441 | Sensitive | lineage2.2.2 | None | SRR1710102 | Sensitive | lineage2.2.2 | cn | SRR1710083 | Sensitive | lineage2.2.2 | cn | SRR1710077 | Sensitive | lineage2.2.2 | cn | SRR1710093 | MDR-TB | lineage2.2.2 | cn | SRR1710111 | MDR-TB | lineage2.2.2 | cn | ERR2516781 | Pre-XDR-TB | lineage2.2.2 | gb | SRR5709760 | Pre-XDR-TB | lineage2.2.2 | th | SRR5709960 | Pre-XDR-TB | lineage2.2.2 | th | SRR5709803 | Pre-XDR-TB | lineage2.2.2 | th | SRR6280252 | RR-TB | lineage2.2.2 | cn | SRR6824346 | MDR-TB | lineage2.2.2 | cn | SRR6824613 | Pre-XDR-TB | lineage2.2.2 | cn | SRR6824582 | MDR-TB | lineage2.2.2 | cn | SRR6824290 | MDR-TB | lineage2.2.2 | cn | SRR6824616 | MDR-TB | lineage2.2.2 | cn | SRR25534376 | Sensitive | lineage2.2.2 | None | SRR21732958 | Sensitive | lineage2.2.2 | None | SRR25534512 | Sensitive | lineage2.2.2 | None | SRR28119818 | MDR-TB | lineage2.2.2 | None | SRR29385473 | Other | lineage2.2.2 | None |
|---|