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SRA data
Rv0006
- c.1563C>T
Drug resistance types
3 Sensitive
0 RR-TB
0 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
5 Other
lineage Counts
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lineage
Count
lineage
Count
La1.4
2
lineage1.2.2.1;lineage4.4.1.1
1
lineage4.2;lineage4.6.3;lineage4.9
1
lineage1.1.1
1
lineage4.1.1.3
1
lineage3.1.2;lineage4.1.1.1
1
lineage3.1.2
1
lineage4.9
1
Showing 1 to 8 of 8 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
9
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11465714
Other
lineage1.2.2.1;lineage4.4.1.1
None
ERR2815539
Other
La1.4
None
ERR4796358
Other
lineage3.1.2;lineage4.1.1.1
None
ERR4819387
Other
La1.4
gb
ERR5311097
Sensitive
lineage4.2;lineage4.6.3;lineage4.9
None
SAMEA2533358
MDR-TB
lineage4.1.1.3
None
SRR11662694
Other
lineage4.9
None
SRR17658571
Sensitive
lineage3.1.2
None
SRR17729353
Sensitive
lineage1.1.1
None
Showing 1 to 9 of 9 entries
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