Rv0006 - c.162G>A
Drug resistance types
11 Sensitive
0 RR-TB
1 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
5 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage2.2.2 | 11 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La3;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 19 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR28240136 | Sensitive | lineage2.2.2 | None | ERR403246 | Sensitive | lineage2.2.2 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR16088007 | Sensitive | lineage2.2.2 | None | ERR867562 | Sensitive | lineage2.2.2 | None | ERR867556 | Sensitive | lineage2.2.2 | None | SRR28239462 | Sensitive | lineage2.2.2 | None | SRR28239978 | Sensitive | lineage2.2.2 | None | SRR28119827 | Other | La3;lineage4.9 | None | SRR11033603 | Sensitive | lineage2.2.2 | None | SRR23862060 | Sensitive | lineage2.2.2 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR161037 | Other | lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR23961472 | Other | La1.7.1 | None | ERR11775684 | Sensitive | lineage2.2.2 | None | SRR28240191 | Sensitive | lineage2.2.2 | None |
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