lineage | Count |
---|---|
lineage2.2.2 | 1 |
lineage4.9 | 6 |
lineage4.3.4.2.1 | 1 |
La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
lineage2.1;lineage4.1.4;lineage4.9 | 1 |
lineage1.2.2.2 | 1 |
1 | |
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 24 |
ID | Drug resistance | Lineage | Country iso2 | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | SRR3675234 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR234659 | HR-TB | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None |
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