Rv0006 - c.279C>T
Drug resistance types
5 Sensitive
1 RR-TB
5 HR-TB
3 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 6 |
| lineage1.1.1.1 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 16 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR8975444 | HR-TB | lineage4.1.2.1 | None |
| SRR26399872 | Sensitive | lineage1.1.1.1 | None |
| ERR13260840 | Sensitive | lineage4.1.2.1 | None |
| SRR2101311 | HR-TB | lineage4.1.2.1 | None |
| SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None |
| SRR6981974 | Sensitive | lineage4.1.2.1 | None |
| ERR4810624 | MDR-TB | lineage2.2 | None |
| SRR6896346 | HR-TB | lineage4.1.2.1 | None |
| ERR037497 | Sensitive | lineage4.3.4.2.1 | mw |
| SRR2101767 | Sensitive | lineage4.1.2.1 | None |
| ERR8025741 | Pre-XDR-TB | lineage2.2.2 | None |
| ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR1193842 | Pre-XDR-TB | lineage4.3 | iq |
| ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
| ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
