Rv0006 - c.279C>T
Drug resistance types
5 Sensitive
1 RR-TB
5 HR-TB
3 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 6 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage1.1.1.1 | 1 |
| lineage2.2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 16 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR13260840 | Sensitive | lineage4.1.2.1 | None | SRR2101767 | Sensitive | lineage4.1.2.1 | None | SRR2101311 | HR-TB | lineage4.1.2.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR1193842 | Pre-XDR-TB | lineage4.3 | iq | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR8975444 | HR-TB | lineage4.1.2.1 | None | SRR26399872 | Sensitive | lineage1.1.1.1 | None | ERR8025741 | Pre-XDR-TB | lineage2.2.2 | None | SRR6981974 | Sensitive | lineage4.1.2.1 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR6896346 | HR-TB | lineage4.1.2.1 | None | ERR037497 | Sensitive | lineage4.3.4.2.1 | mw | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None |
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