Rv0006 - p.Asn193Ser
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
19 Sensitive
7 RR-TB
0 HR-TB
136 MDR-TB
20 Pre-XDR-TB
42 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.2 | 218 |
| lineage1.2.2.2;lineage4.3.3 | 1 |
| lineage4.8 | 2 |
| lineage1.2.2.2;lineage2.2.1 | 1 |
| lineage1.2.2.2;lineage4 | 2 |
| lineage1.2.2.2;lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 225 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4809300 | RR-TB | lineage1.2.2.2 | za | ERR11252699 | RR-TB | lineage1.2.2.2 | None | ERR11252409 | RR-TB | lineage1.2.2.2;lineage4.3.3 | None | ERR6929519 | MDR-TB | lineage1.2.2.2 | None | ERR114505 | MDR-TB | lineage1.2.2.2 | None | ERR8975076 | Sensitive | lineage1.2.2.2 | None | ERR8975128 | Sensitive | lineage1.2.2.2 | None | SRR833126 | MDR-TB | lineage1.2.2.2 | None | ERR10610376 | MDR-TB | lineage1.2.2.2 | None | ERR8976063 | MDR-TB | lineage1.2.2.2 | None | ERR8976089 | MDR-TB | lineage1.2.2.2 | None | SRR2100352 | MDR-TB | lineage1.2.2.2 | None | ERR2516929 | MDR-TB | lineage1.2.2.2 | gb | ERR2515648 | MDR-TB | lineage1.2.2.2 | za | ERR2515348 | MDR-TB | lineage1.2.2.2 | za | ERR2515131 | MDR-TB | lineage1.2.2.2 | za | ERR2515962 | MDR-TB | lineage1.2.2.2 | za | SAMN02586077 | Pre-XDR-TB | lineage1.2.2.2 | za | ERR9992919 | XDR-TB | lineage1.2.2.2 | None | ERR11252675 | Sensitive | lineage1.2.2.2 | None | ERR6929525 | MDR-TB | lineage1.2.2.2 | None | ERR9806806 | MDR-TB | lineage1.2.2.2 | None | ERR9992874 | XDR-TB | lineage1.2.2.2 | None | ERR9993062 | XDR-TB | lineage1.2.2.2 | None | SRR12882609 | MDR-TB | lineage1.2.2.2 | None | ERR13286084 | MDR-TB | lineage1.2.2.2 | None | SRR1180341 | MDR-TB | lineage1.2.2.2 | None | ERR13286163 | XDR-TB | lineage1.2.2.2 | None | ERR9992949 | XDR-TB | lineage1.2.2.2 | None | ERR9993157 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9992897 | XDR-TB | lineage1.2.2.2 | None | ERR9992622 | XDR-TB | lineage1.2.2.2 | None | ERR9992932 | XDR-TB | lineage1.2.2.2 | None | ERR11488844 | MDR-TB | lineage1.2.2.2 | None | ERR6929528 | MDR-TB | lineage1.2.2.2 | None | ERR11488803 | MDR-TB | lineage1.2.2.2 | None | ERR551921 | MDR-TB | lineage1.2.2.2 | None | ERR9992986 | XDR-TB | lineage1.2.2.2 | None | SRR6856019 | MDR-TB | lineage1.2.2.2 | None | SRR6896499 | Sensitive | lineage1.2.2.2 | None | SRR6930903 | MDR-TB | lineage1.2.2.2 | None | ERR9993042 | XDR-TB | lineage1.2.2.2 | None | SRR6930912 | MDR-TB | lineage1.2.2.2 | None | SRR6930913 | MDR-TB | lineage1.2.2.2 | None | SRR6930914 | MDR-TB | lineage1.2.2.2 | None | SRR6982155 | MDR-TB | lineage1.2.2.2 | None | SRR6982247 | MDR-TB | lineage1.2.2.2 | None | SRR8102333 | MDR-TB | lineage1.2.2.2 | None | ERR6929533 | MDR-TB | lineage1.2.2.2 | None | ERR10610325 | MDR-TB | lineage1.2.2.2 | None | ERR9992914 | XDR-TB | lineage1.2.2.2 | None | ERR9992889 | XDR-TB | lineage1.2.2.2 | None | ERR6929513 | MDR-TB | lineage1.2.2.2 | None | ERR2200095 | MDR-TB | lineage1.2.2.2 | None | SRR832992 | MDR-TB | lineage1.2.2.2 | None | ERR13288942 | MDR-TB | lineage1.2.2.2 | None | ERR9993073 | XDR-TB | lineage1.2.2.2 | None | SRR1180415 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR4830548 | MDR-TB | lineage1.2.2.2 | None | ERR13284963 | MDR-TB | lineage4.8 | None | ERR9992898 | XDR-TB | lineage1.2.2.2;lineage2.2.1 | None | ERR212069 | Sensitive | lineage1.2.2.2;lineage4 | mw | SRR29094018 | MDR-TB | lineage1.2.2.2 | None | ERR9992764 | XDR-TB | lineage1.2.2.2 | None | SRR10315613 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR833071 | MDR-TB | lineage1.2.2.2 | None | ERR2503477 | MDR-TB | lineage1.2.2.2 | None | ERR9993158 | XDR-TB | lineage1.2.2.2 | None | ERR6929530 | MDR-TB | lineage1.2.2.2 | None | ERR6929516 | MDR-TB | lineage1.2.2.2 | None | ERR6929515 | MDR-TB | lineage1.2.2.2 | None | SRR833157 | MDR-TB | lineage1.2.2.2 | None | ERR6929522 | MDR-TB | lineage1.2.2.2 | None | ERR6929527 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR4809016 | MDR-TB | lineage1.2.2.2 | za | ERR4809186 | MDR-TB | lineage1.2.2.2 | za | ERR4809187 | Pre-XDR-TB | lineage1.2.2.2 | za | ERR4809189 | MDR-TB | lineage1.2.2.2 | za | ERR4809002 | MDR-TB | lineage1.2.2.2 | za | ERR4809303 | Pre-XDR-TB | lineage1.2.2.2 | za | SRR10315643 | MDR-TB | lineage1.2.2.2 | None | ERR5917973 | MDR-TB | lineage1.2.2.2 | None | ERR8975693 | MDR-TB | lineage1.2.2.2 | None | SRR833089 | MDR-TB | lineage1.2.2.2 | None | ERR11466137 | Sensitive | lineage1.2.2.2 | None | SRR2101757 | MDR-TB | lineage1.2.2.2 | None | SRR2101763 | MDR-TB | lineage1.2.2.2 | None | ERR2515465 | MDR-TB | lineage1.2.2.2 | za | ERR2515749 | MDR-TB | lineage1.2.2.2 | za | ERR2515798 | MDR-TB | lineage1.2.2.2 | za | ERR2515802 | Pre-XDR-TB | lineage1.2.2.2 | za | ERR2515514 | MDR-TB | lineage1.2.2.2 | za | ERR11465428 | Sensitive | lineage1.2.2.2 | None | SAMN02585975 | MDR-TB | lineage1.2.2.2 | za | SAMN02586055 | MDR-TB | lineage1.2.2.2 | za | ERR6929526 | MDR-TB | lineage1.2.2.2 | None | SAMN02053802 | MDR-TB | lineage1.2.2.2 | za | ERR7737912 | MDR-TB | lineage1.2.2.2 | None | ERR9993043 | XDR-TB | lineage1.2.2.2 | None | ERR9992913 | XDR-TB | lineage1.2.2.2 | None | ERR9992920 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9992873 | XDR-TB | lineage1.2.2.2 | None | ERR9993056 | XDR-TB | lineage1.2.2.2 | None | ERR9992925 | XDR-TB | lineage1.2.2.2 | None | ERR9992926 | XDR-TB | lineage1.2.2.2 | None | ERR9992845 | XDR-TB | lineage1.2.2.2 | None | ERR9992717 | MDR-TB | lineage1.2.2.2 | None | ERR9992825 | XDR-TB | lineage1.2.2.2 | None | ERR9993059 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9992963 | XDR-TB | lineage1.2.2.2 | None | ERR9992961 | XDR-TB | lineage1.2.2.2 | None | ERR9992843 | XDR-TB | lineage1.2.2.2 | None | ERR9992911 | XDR-TB | lineage1.2.2.2 | None | ERR9992912 | XDR-TB | lineage1.2.2.2 | None | ERR13288986 | MDR-TB | lineage1.2.2.2 | None | ERR2515381 | Sensitive | lineage1.2.2.2 | za | ERR11488444 | MDR-TB | lineage1.2.2.2 | None | ERR2515777 | MDR-TB | lineage1.2.2.2 | za | ERR2515252 | MDR-TB | lineage1.2.2.2 | za | SRR833019 | MDR-TB | lineage1.2.2.2 | None | ERR2515249 | MDR-TB | lineage1.2.2.2 | za | ERR2515163 | Pre-XDR-TB | lineage1.2.2.2 | za | ERR4809350 | MDR-TB | lineage1.2.2.2 | za | ERR4809201 | MDR-TB | lineage1.2.2.2 | za | ERR4809274 | MDR-TB | lineage1.2.2.2 | za | ERR8975922 | Sensitive | lineage1.2.2.2 | None | ERR11252442 | Sensitive | lineage1.2.2.2 | None | ERR9992642 | MDR-TB | lineage1.2.2.2 | None | ERR6929524 | MDR-TB | lineage1.2.2.2 | None | ERR9119978 | MDR-TB | lineage1.2.2.2 | None | ERR9993165 | XDR-TB | lineage1.2.2.2 | None | ERR9993170 | XDR-TB | lineage1.2.2.2 | None | ERR13260903 | XDR-TB | lineage1.2.2.2 | None | ERR13260474 | Sensitive | lineage1.2.2.2 | None | ERR9992935 | XDR-TB | lineage1.2.2.2 | None | ERR11081950 | MDR-TB | lineage4.8 | None | ERR11488830 | MDR-TB | lineage1.2.2.2 | None | ERR13260829 | Sensitive | lineage1.2.2.2 | None | ERR13286172 | MDR-TB | lineage1.2.2.2 | None | SRR1196522 | MDR-TB | lineage1.2.2.2 | None | SRR10315739 | MDR-TB | lineage1.2.2.2 | None | SRR12882252 | Sensitive | lineage1.2.2.2 | None | ERR6929534 | MDR-TB | lineage1.2.2.2 | None | ERR4809185 | Pre-XDR-TB | lineage1.2.2.2 | za | ERR4809203 | MDR-TB | lineage1.2.2.2 | za | ERR4809214 | MDR-TB | lineage1.2.2.2 | za | ERR11252548 | Other | lineage1.2.2.2 | None | ERR11488829 | MDR-TB | lineage1.2.2.2 | None | ERR4808981 | MDR-TB | lineage1.2.2.2 | None | ERR4808992 | MDR-TB | lineage1.2.2.2 | za | ERR4808962 | MDR-TB | lineage1.2.2.2 | za | ERR4809231 | MDR-TB | lineage1.2.2.2 | za | ERR4809027 | MDR-TB | lineage1.2.2.2 | za | ERR4809084 | MDR-TB | lineage1.2.2.2 | za | ERR4809078 | MDR-TB | lineage1.2.2.2;lineage4 | za | ERR4809348 | MDR-TB | lineage1.2.2.2 | za | ERR11252559 | RR-TB | lineage1.2.2.2 | None | ERR4830494 | MDR-TB | lineage1.2.2.2 | za | ERR551920 | MDR-TB | lineage1.2.2.2 | sz | ERR8975057 | RR-TB | lineage1.2.2.2 | None | ERR9993057 | XDR-TB | lineage1.2.2.2 | None | ERR8976062 | MDR-TB | lineage1.2.2.2 | None | SRR1184322 | MDR-TB | lineage1.2.2.2 | None | ERR553134 | MDR-TB | lineage1.2.2.2 | sz | ERR552495 | MDR-TB | lineage1.2.2.2 | sz | ERR551329 | MDR-TB | lineage1.2.2.2 | sz | ERR553321 | MDR-TB | lineage1.2.2.2 | sz | ERR551319 | MDR-TB | lineage1.2.2.2 | sz | ERR550754 | MDR-TB | lineage1.2.2.2 | sz | ERR9992672 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9992955 | MDR-TB | lineage1.2.2.2 | None | SRR10315469 | MDR-TB | lineage1.2.2.2 | None | ERR6929520 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9119608 | MDR-TB | lineage1.2.2.2 | None | ERR9119979 | MDR-TB | lineage1.2.2.2 | None | SRR10315712 | MDR-TB | lineage1.2.2.2 | None | ERR13260902 | XDR-TB | lineage1.2.2.2 | None | ERR9992880 | XDR-TB | lineage1.2.2.2 | None | ERR9992964 | XDR-TB | lineage1.2.2.2 | None | SAMN01828251 | MDR-TB | lineage1.2.2.2 | za | ERR13288775 | MDR-TB | lineage1.2.2.2 | None | SRR6930911 | MDR-TB | lineage1.2.2.2 | None | ERR13286110 | MDR-TB | lineage1.2.2.2 | None | ERR10610240 | MDR-TB | lineage1.2.2.2 | None | ERR2516067 | RR-TB | lineage1.2.2.2;lineage4.1.2 | za | ERR2515342 | MDR-TB | lineage1.2.2.2 | za | ERR2516057 | MDR-TB | lineage1.2.2.2 | za | ERR10748207 | XDR-TB | lineage1.2.2.2 | None | ERR10748218 | MDR-TB | lineage1.2.2.2 | None | ERR10748525 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR11465429 | Sensitive | lineage1.2.2.2 | None | SRR1180359 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR11488406 | MDR-TB | lineage1.2.2.2 | None | ERR3561990 | Sensitive | lineage1.2.2.2 | None | ERR3561991 | Sensitive | lineage1.2.2.2 | None | SRR832989 | MDR-TB | lineage1.2.2.2 | None | SRR10315601 | MDR-TB | lineage1.2.2.2 | None | ERR13288979 | XDR-TB | lineage1.2.2.2 | None | SRR1180437 | MDR-TB | lineage1.2.2.2 | None | ERR4872214 | MDR-TB | lineage1.2.2.2 | None | ERR9806648 | MDR-TB | lineage1.2.2.2 | None | SRR29055934 | MDR-TB | lineage1.2.2.2 | None | ERR9992860 | XDR-TB | lineage1.2.2.2 | None | ERR7821132 | Sensitive | lineage1.2.2.2 | None | ERR9992859 | XDR-TB | lineage1.2.2.2 | None | ERR9993104 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR10315459 | MDR-TB | lineage1.2.2.2 | None | ERR7902616 | Sensitive | lineage1.2.2.2 | None | ERR9992711 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR10315602 | MDR-TB | lineage1.2.2.2 | None | ERR6929514 | MDR-TB | lineage1.2.2.2 | None | SRR29055903 | MDR-TB | lineage1.2.2.2 | None | ERR11488752 | MDR-TB | lineage1.2.2.2 | None | ERR11466138 | Sensitive | lineage1.2.2.2 | None | SRR29096614 | MDR-TB | lineage1.2.2.2 | None | ERR9992936 | MDR-TB | lineage1.2.2.2 | None | ERR6929518 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR6929529 | MDR-TB | lineage1.2.2.2 | None | ERR9992928 | XDR-TB | lineage1.2.2.2 | None | ERR9992881 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR1175063 | MDR-TB | lineage1.2.2.2 | None | ERR6929517 | MDR-TB | lineage1.2.2.2 | None | ERR7737676 | RR-TB | lineage1.2.2.2 | None | ERR4808990 | MDR-TB | lineage1.2.2.2 | za | ERR4809013 | MDR-TB | lineage1.2.2.2 | za |
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