lineage | Count |
---|---|
lineage2.2.1 | 25 |
lineage4.8 | 3 |
lineage4.1.2 | 1 |
lineage4.5 | 1 |
lineage2.2.2 | 5 |
lineage4.1.1 | 1 |
lineage3 | 1 |
lineage4.2.1 | 4 |
lineage4.1.1.3 | 1 |
lineage4.4.1.2 | 1 |
lineage4.1.2.1.1 | 1 |
lineage4.9.1 | 1 |
lineage4.1.2.1 | 1 |
lineage4.4.2 | 1 |
spoligotype | Count |
---|---|
None | 47 |
ID | Drug resistance | Lineage | Country iso2 | ERR2517112 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2516770 | MDR-TB | lineage2.2.1 | gb | SRR22536492 | MDR-TB | lineage4.8 | None | SRR1180316 | MDR-TB | lineage2.2.1 | None | ERR13291066 | MDR-TB | lineage4.1.2 | None | SRR25534479 | MDR-TB | lineage2.2.1 | None | ERR4796387 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180385 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR29274014 | Pre-XDR-TB | lineage4.8 | None | ERR7911644 | MDR-TB | lineage2.2.2 | za | ERR13260266 | MDR-TB | lineage4.1.1 | None | SRR29539101 | MDR-TB | lineage2.2.1 | None | ERR3335781 | Pre-XDR-TB | lineage3 | pk | ERR13284375 | XDR-TB | lineage2.2.1 | None | SRR7645943 | MDR-TB | lineage4.2.1 | None | SRR29385491 | MDR-TB | lineage2.2.1 | None | SRR7646019 | MDR-TB | lineage2.2.1 | None | SRR24256107 | MDR-TB | lineage2.2.1 | None | ERR13288959 | MDR-TB | lineage4.1.1.3 | None | ERR4827953 | MDR-TB | lineage2.2.1 | None | ERR2517090 | MDR-TB | lineage2.2.1 | gb | SAMN02586083 | MDR-TB | lineage2.2.1 | za | SRR29539223 | Pre-XDR-TB | lineage2.2.1 | None | SRR6256972 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303890 | Sensitive | lineage4.4.1.2 | None | ERR158606 | MDR-TB | lineage2.2.1 | gb | SRR14782609 | Pre-XDR-TB | lineage4.2.1 | None | ERR757163 | Pre-XDR-TB | lineage4.1.2.1.1 | ar | SRR29681256 | MDR-TB | lineage2.2.1 | None | ERR13289335 | XDR-TB | lineage2.2.2 | None | ERR9992686 | XDR-TB | lineage2.2.2 | None | ERR2516775 | MDR-TB | lineage2.2.1 | gb | SRR1183968 | MDR-TB | lineage2.2.1 | None | SRR14807588 | MDR-TB | lineage4.2.1 | None | SRR6807691 | MDR-TB | lineage4.2.1 | None | ERR5758332 | Pre-XDR-TB | lineage2.2.2 | None | ERR11083055 | XDR-TB | lineage2.2.1 | None | SRR24256264 | MDR-TB | lineage2.2.1 | None | ERR2515528 | MDR-TB | lineage4.9.1 | za | ERR2515835 | MDR-TB | lineage2.2.1 | za | ERR4797457 | XDR-TB | lineage4.8 | in | ERR8975767 | XDR-TB | lineage2.2.2 | None | SRR1181042 | MDR-TB | lineage2.2.1 | None | ERR13260665 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2516769 | MDR-TB | lineage2.2.1 | gb | ERR13298139 | MDR-TB | lineage4.4.2 | None |
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