Rv0010c - c.-79C>T


Drug resistance types
45 Sensitive 1 RR-TB 6 HR-TB 52 MDR-TB 38 Pre-XDR-TB 4 XDR-TB 5 Other
lineage Counts
lineage Count
lineage2.2.1 88
La1.6 1
lineage4.4.1.1 1
lineage4.8 16
lineage4.5 3
lineage4.3.3 1
lineage2.1 1
lineage4.9 1
lineage4.3.2 2
lineage4.1.2.1 4
lineage3;lineage4.3.3 1
lineage4.1.3 2
lineage4.3.4.1 5
lineage2.2.1.1 3
lineage4.1.1.2 1
lineage4.6.2.2 5
lineage2.2.1.2 2
lineage4.3.4.2 3
lineage4 1
lineage4.3.4.2.1 1
lineage4.7 2
lineage3 1
lineage4.2.2.2 2
lineage1.2.2.2;lineage3;lineage4.4.1.1 1
lineage4.2.1 2
lineage4.1.1.3 1
spoligotype Counts
spoligotype Count
None 151
Geographic prevalence
Country level data for this variant is available for 27 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR15316443 Pre-XDR-TB lineage2.2.1 None
ERR11268044 Other La1.6 None
SRR25515426 Pre-XDR-TB lineage2.2.1 None
SRR7516339 MDR-TB lineage2.2.1 None
SRR7276686 Sensitive lineage4.4.1.1 None
ERR2041781 MDR-TB lineage2.2.1 rs
ERR5865441 Pre-XDR-TB lineage2.2.1 None
ERR5865471 MDR-TB lineage2.2.1 None
ERR5864878 Pre-XDR-TB lineage2.2.1 None
ERR5864360 MDR-TB lineage2.2.1 None
ERR978801 Sensitive lineage4.8 gl
SRR7516325 Pre-XDR-TB lineage2.2.1 None
SRR7516338 MDR-TB lineage2.2.1 None
SRR21690894 Sensitive lineage4.8 None
ERR718400 Sensitive lineage4.5 th
ERR5865608 MDR-TB lineage2.2.1 None
ERR4831122 MDR-TB lineage2.2.1 de
SRR19303785 Sensitive lineage4.3.3 None
ERR5865263 XDR-TB lineage2.2.1 None
SRR11662296 MDR-TB lineage2.1 None
SRR5153303 MDR-TB lineage2.2.1 None
ERR3275542 Sensitive lineage4.8 nl
ERR2446553 Sensitive lineage4.8 nl
ERR551041 Sensitive lineage4.9 de
ERR5865039 Pre-XDR-TB lineage2.2.1 None
ERR11049473 XDR-TB lineage2.2.1 None
ERR5864017 MDR-TB lineage2.2.1 None
ERR6866227 Sensitive lineage4.3.2 None
ERR3276026 HR-TB lineage4.1.2.1 nl
ERR11243565 Pre-XDR-TB lineage2.2.1 None
ERR4799987 Sensitive lineage3;lineage4.3.3 None
SRR7516372 Pre-XDR-TB lineage2.2.1 None
SRR7516326 Pre-XDR-TB lineage2.2.1 None
ERR11043012 HR-TB lineage4.1.3 None
SRR6785206 Sensitive lineage2.2.1 None
SRR1175491 MDR-TB lineage4.3.4.1 None
DRR034536 Sensitive lineage2.2.1 None
ERR5864879 Pre-XDR-TB lineage2.2.1 None
SRR11033721 MDR-TB lineage2.2.1 None
SRR28045435 MDR-TB lineage2.2.1.1 None
SRR28351537 Pre-XDR-TB lineage4.1.1.2 None
SRR21887742 MDR-TB lineage2.2.1 None
SRR22251946 Sensitive lineage2.2.1 None
SRR7516440 Sensitive lineage4.8 None
SRR5073605 Other lineage2.2.1 vn
ERR5864487 Pre-XDR-TB lineage2.2.1 None
ERR5864483 Pre-XDR-TB lineage2.2.1 None
SRR7516375 Pre-XDR-TB lineage2.2.1 None
ERR5864881 Pre-XDR-TB lineage2.2.1 None
ERR5864359 MDR-TB lineage2.2.1 None
SRR7657746 MDR-TB lineage2.2.1 None
SRR26937092 MDR-TB lineage2.2.1 None
ERR3794495 MDR-TB lineage2.2.1 None
ERR4423649 MDR-TB lineage4.6.2.2 None
ERR538430 Sensitive lineage2.2.1.2 None
ERR4423648 MDR-TB lineage4.6.2.2 None
ERR5865521 MDR-TB lineage2.2.1 None
SRR5709765 Pre-XDR-TB lineage2.2.1 th
ERR5865262 XDR-TB lineage2.2.1 None
SRR26937114 MDR-TB lineage2.2.1 None
ERR2517418 Sensitive lineage4.8 nl
ERR5865038 Pre-XDR-TB lineage2.2.1 None
ERR11489034 MDR-TB lineage4.3.4.1 None
ERR11489035 MDR-TB lineage4.3.4.1 None
SRR24256179 MDR-TB lineage2.2.1 None
ERR2229724 Sensitive lineage4.8 None
ERR5864882 Pre-XDR-TB lineage2.2.1 None
SRR23340105 Pre-XDR-TB lineage2.2.1 None
SRR5184975 MDR-TB lineage2.2.1 None
SRR25515082 Pre-XDR-TB lineage2.2.1 None
ERR768036 Sensitive lineage2.2.1 th
SRR21658389 Sensitive lineage2.2.1.1 None
ERR5864485 Pre-XDR-TB lineage2.2.1 None
SRR5535808 MDR-TB lineage4.6.2.2 None
ERR144629 Sensitive lineage4.8 ru
ERR5865037 Pre-XDR-TB lineage2.2.1 None
ERR5864362 Pre-XDR-TB lineage2.2.1 None
SRR14164946 Sensitive lineage4.3.4.2 None
ERR4798688 Other lineage2.2.1.2 in
ERR5864364 MDR-TB lineage2.2.1 None
SRR11443991 MDR-TB lineage4.1.3 None
SRR6484989 MDR-TB lineage2.2.1 None
SRR10040514 MDR-TB lineage4.5 None
ERR5865520 MDR-TB lineage2.2.1 None
SRR6832005 Sensitive lineage4.8 None
SRR11662142 Pre-XDR-TB lineage2.2.1 None
ERR5865261 XDR-TB lineage2.2.1 None
ERR4195243 Sensitive lineage4 None
ERR5865609 MDR-TB lineage2.2.1 None
ERR4821184 Sensitive lineage4.3.4.2.1 None
ERR7361917 Sensitive lineage4.3.2 None
SRR28044671 Sensitive lineage4.1.2.1 None
SRR27980486 MDR-TB lineage4.3.4.2 None
SRR14164577 Sensitive lineage4.7 None
ERR5864484 Pre-XDR-TB lineage2.2.1 None
SRR1175472 RR-TB lineage4.3.4.1 None
ERR4830086 Sensitive lineage4.8 None
ERR5865041 Pre-XDR-TB lineage2.2.1 None
ERR5865470 MDR-TB lineage2.2.1 None
SRR28119836 Sensitive lineage2.2.1.1 None
ERR4800017 Other lineage3 in
ERR2041783 Pre-XDR-TB lineage2.2.1 rs
ERR11081248 Sensitive lineage4.1.2.1 None
ERR5865442 Pre-XDR-TB lineage2.2.1 None
ERR5864486 Pre-XDR-TB lineage2.2.1 None
ERR4797166 Pre-XDR-TB lineage4.2.2.2 in
SRR26111900 Sensitive lineage4.8 None
SRR14802072 Sensitive lineage2.2.1 None
ERR4796787 MDR-TB lineage1.2.2.2;lineage3;lineage4.4.1.1 in
ERR5866109 MDR-TB lineage2.2.1 None
ERR5864482 Pre-XDR-TB lineage2.2.1 None
ERR3276290 Sensitive lineage4.8 nl
ERR9119309 Sensitive lineage2.2.1 None
ERR5864357 Pre-XDR-TB lineage2.2.1 None
SRR10828196 Pre-XDR-TB lineage2.2.1 None
ERR7737784 MDR-TB lineage4.2.2.2 None
ERR5864880 Pre-XDR-TB lineage2.2.1 None
ERR5864361 Pre-XDR-TB lineage2.2.1 None
ERR4827791 Sensitive lineage4.8 None
ERR10762414 MDR-TB lineage4.2.1 None
ERR4811221 Sensitive lineage2.2.1 cn
SRR14801640 HR-TB lineage2.2.1 None
SRR14164712 Sensitive lineage4.3.4.1 None
SRR24256196 MDR-TB lineage2.2.1 None
SRR24256100 MDR-TB lineage2.2.1 None
SRR26399447 Sensitive lineage2.2.1 None
ERR5864354 MDR-TB lineage2.2.1 None
ERR5864355 MDR-TB lineage2.2.1 None
ERR5865040 Pre-XDR-TB lineage2.2.1 None
ERR5865480 MDR-TB lineage2.2.1 None
ERR5866108 MDR-TB lineage2.2.1 None
ERR2517476 Sensitive lineage4.8 nl
ERR4830246 Sensitive lineage2.2.1 vn
DRR130213 Pre-XDR-TB lineage2.2.1 None
SRR21277465 Sensitive lineage2.2.1 None
ERR11069109 MDR-TB lineage4.7 None
ERR7910902 MDR-TB lineage4.2.1 md
ERR5864356 Pre-XDR-TB lineage2.2.1 None
DRR188840 Sensitive lineage2.2.1 None
ERR2446389 Sensitive lineage4.8 nl
ERR5865481 MDR-TB lineage2.2.1 None
SRR11444077 Sensitive lineage4.6.2.2 None
ERR11044575 MDR-TB lineage2.2.1 None
ERR3275311 Sensitive lineage4.8 nl
ERR5864358 MDR-TB lineage2.2.1 None
SRR13583486 HR-TB lineage4.1.1.3 None
SRR5067685 Other lineage4.5 vn
ERR369688 HR-TB lineage4.6.2.2 None
SRR10040479 MDR-TB lineage2.2.1 None
ERR2707018 MDR-TB lineage4.3.4.2 cd
SRR21690748 HR-TB lineage4.1.2.1 None