Rv0010c - c.-79C>T
Drug resistance types
56 Sensitive
1 RR-TB
7 HR-TB
57 MDR-TB
41 Pre-XDR-TB
4 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.6 | 1 |
| lineage2.2.1 | 100 |
| lineage4.8 | 18 |
| lineage1.1.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.3 | 2 |
| lineage4.3.2 | 2 |
| lineage4.3.3 | 1 |
| lineage4.3.4.2 | 4 |
| lineage2.2.1.1 | 4 |
| lineage3;lineage4.3.3 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage1.2.2.2;lineage3;lineage4.4.1.1 | 1 |
| lineage4 | 1 |
| lineage4.3.4.1 | 5 |
| lineage4.6.2.2 | 5 |
| lineage4.2.1 | 2 |
| lineage4.7 | 3 |
| lineage4.5 | 4 |
| lineage4.1.2.1 | 5 |
| lineage4.1.1.3 | 2 |
| lineage4.1 | 1 |
| lineage4.9 | 1 |
| lineage2.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.2.2.2 | 2 |
| lineage3 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 175 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11268044 | Other | La1.6 | None | ERR9119309 | Sensitive | lineage2.2.1 | None | ERR2229724 | Sensitive | lineage4.8 | None | SRR22251946 | Sensitive | lineage2.2.1 | None | SRR29772475 | Other | lineage1.1.2 | None | ERR5866109 | MDR-TB | lineage2.2.1 | None | SRR7276686 | Sensitive | lineage4.4.1.1 | None | ERR5865471 | MDR-TB | lineage2.2.1 | None | ERR3275542 | Sensitive | lineage4.8 | nl | ERR5864483 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864878 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256179 | MDR-TB | lineage2.2.1 | None | ERR11043012 | HR-TB | lineage4.1.3 | None | ERR5864358 | MDR-TB | lineage2.2.1 | None | SRR21690894 | Sensitive | lineage4.8 | None | SRR10828196 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865039 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865263 | XDR-TB | lineage2.2.1 | None | SRR23340105 | Pre-XDR-TB | lineage2.2.1 | None | ERR7361917 | Sensitive | lineage4.3.2 | None | SRR19303785 | Sensitive | lineage4.3.3 | None | SRR27980486 | MDR-TB | lineage4.3.4.2 | None | SRR21658389 | Sensitive | lineage2.2.1.1 | None | SRR28239942 | MDR-TB | lineage2.2.1 | None | ERR5865441 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231689 | MDR-TB | lineage4.3.4.2 | None | SRR29273898 | Other | lineage4.8 | None | ERR5864355 | MDR-TB | lineage2.2.1 | None | ERR5864360 | MDR-TB | lineage2.2.1 | None | ERR5865262 | XDR-TB | lineage2.2.1 | None | ERR5864364 | MDR-TB | lineage2.2.1 | None | DRR130145 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799987 | Sensitive | lineage3;lineage4.3.3 | None | ERR11044575 | MDR-TB | lineage2.2.1 | None | SRR29440604 | Sensitive | lineage2.2.1 | None | SRR6484989 | MDR-TB | lineage2.2.1 | None | ERR4798688 | Other | lineage2.2.1.2 | in | ERR5864881 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865037 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096221 | Sensitive | lineage4.3.4.2.1 | None | ERR4831122 | MDR-TB | lineage2.2.1 | de | ERR4796787 | MDR-TB | lineage1.2.2.2;lineage3;lineage4.4.1.1 | in | SRR26937114 | MDR-TB | lineage2.2.1 | None | SRR21277465 | Sensitive | lineage2.2.1 | None | ERR5865261 | XDR-TB | lineage2.2.1 | None | ERR4195243 | Sensitive | lineage4 | None | ERR4821184 | Sensitive | lineage4.3.4.2.1 | None | ERR11489035 | MDR-TB | lineage4.3.4.1 | None | ERR4423648 | MDR-TB | lineage4.6.2.2 | None | ERR10762414 | MDR-TB | lineage4.2.1 | None | SRR7516339 | MDR-TB | lineage2.2.1 | None | SRR14802072 | Sensitive | lineage2.2.1 | None | SRR5709765 | Pre-XDR-TB | lineage2.2.1 | th | ERR978801 | Sensitive | lineage4.8 | gl | ERR5865481 | MDR-TB | lineage2.2.1 | None | SRR6832005 | Sensitive | lineage4.8 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR14164577 | Sensitive | lineage4.7 | None | SRR5067685 | Other | lineage4.5 | vn | ERR2517418 | Sensitive | lineage4.8 | nl | SRR7516440 | Sensitive | lineage4.8 | None | ERR5864359 | MDR-TB | lineage2.2.1 | None | ERR5865470 | MDR-TB | lineage2.2.1 | None | SRR28119836 | Sensitive | lineage2.2.1.1 | None | SRR21690748 | HR-TB | lineage4.1.2.1 | None | SRR21887742 | MDR-TB | lineage2.2.1 | None | ERR2446389 | Sensitive | lineage4.8 | nl | ERR4423649 | MDR-TB | lineage4.6.2.2 | None | ERR3275311 | Sensitive | lineage4.8 | nl | SRR7657746 | MDR-TB | lineage2.2.1 | None | ERR3276290 | Sensitive | lineage4.8 | nl | SRR7516338 | MDR-TB | lineage2.2.1 | None | ERR5864357 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865041 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865608 | MDR-TB | lineage2.2.1 | None | ERR5866108 | MDR-TB | lineage2.2.1 | None | ERR4827791 | Sensitive | lineage4.8 | None | ERR13258452 | Pre-XDR-TB | lineage2.2.1 | None | SRR13583486 | HR-TB | lineage4.1.1.3 | None | SRR14801640 | HR-TB | lineage2.2.1 | None | SRR26399447 | Sensitive | lineage2.2.1 | None | SRR29051280 | HR-TB | lineage4.1.1.3 | None | SRR7516325 | Pre-XDR-TB | lineage2.2.1 | None | SRR5535808 | MDR-TB | lineage4.6.2.2 | None | SRR26937092 | MDR-TB | lineage2.2.1 | None | SRR29053205 | Other | lineage2.2.1 | None | ERR5865040 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864880 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865609 | MDR-TB | lineage2.2.1 | None | ERR11489034 | MDR-TB | lineage4.3.4.1 | None | SRR13232609 | Sensitive | lineage4.1 | None | ERR5865520 | MDR-TB | lineage2.2.1 | None | SRR29441079 | Sensitive | lineage2.2.1 | None | ERR13291187 | Other | lineage2.2.1 | None | ERR5864487 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864879 | Pre-XDR-TB | lineage2.2.1 | None | ERR768036 | Sensitive | lineage2.2.1 | th | SRR28045435 | MDR-TB | lineage2.2.1.1 | None | SRR5153303 | MDR-TB | lineage2.2.1 | None | ERR718400 | Sensitive | lineage4.5 | th | ERR7910902 | MDR-TB | lineage4.2.1 | md | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR5864017 | MDR-TB | lineage2.2.1 | None | ERR5864486 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040514 | MDR-TB | lineage4.5 | None | ERR551041 | Sensitive | lineage4.9 | de | ERR144629 | Sensitive | lineage4.8 | ru | ERR4830246 | Sensitive | lineage2.2.1 | vn | SRR25515426 | Pre-XDR-TB | lineage2.2.1 | None | ERR538430 | Sensitive | lineage2.2.1.2 | None | SRR11443991 | MDR-TB | lineage4.1.3 | None | ERR5864882 | Pre-XDR-TB | lineage2.2.1 | None | SRR11033721 | MDR-TB | lineage2.2.1 | None | ERR11069109 | MDR-TB | lineage4.7 | None | SRR5073605 | Other | lineage2.2.1 | vn | SRR24256100 | MDR-TB | lineage2.2.1 | None | ERR4811221 | Sensitive | lineage2.2.1 | cn | ERR369688 | HR-TB | lineage4.6.2.2 | None | SRR11662296 | MDR-TB | lineage2.1 | None | SRR28351537 | Pre-XDR-TB | lineage4.1.1.2 | None | ERR4830086 | Sensitive | lineage4.8 | None | SRR15316443 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864361 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864484 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864485 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040479 | MDR-TB | lineage2.2.1 | None | SRR11662142 | Pre-XDR-TB | lineage2.2.1 | None | SRR29440876 | Sensitive | lineage2.2.1 | None | SRR14164946 | Sensitive | lineage4.3.4.2 | None | ERR2446553 | Sensitive | lineage4.8 | nl | ERR3276026 | HR-TB | lineage4.1.2.1 | nl | SRR28858550 | Sensitive | lineage4.5 | None | ERR5865521 | MDR-TB | lineage2.2.1 | None | ERR13285155 | MDR-TB | lineage4.7 | None | ERR5865038 | Pre-XDR-TB | lineage2.2.1 | None | SRR7516375 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864356 | Pre-XDR-TB | lineage2.2.1 | None | SRR29050628 | Sensitive | lineage2.2.1.1 | None | SRR11444077 | Sensitive | lineage4.6.2.2 | None | SRR24256196 | MDR-TB | lineage2.2.1 | None | SRR5184975 | MDR-TB | lineage2.2.1 | None | SRR7516372 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864354 | MDR-TB | lineage2.2.1 | None | ERR11049473 | XDR-TB | lineage2.2.1 | None | ERR5864363 | Pre-XDR-TB | lineage2.2.1 | None | ERR6866227 | Sensitive | lineage4.3.2 | None | SRR29273655 | MDR-TB | lineage4.8 | None | ERR5865480 | MDR-TB | lineage2.2.1 | None | SRR7516326 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044671 | Sensitive | lineage4.1.2.1 | None | SRR25515082 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797166 | Pre-XDR-TB | lineage4.2.2.2 | in | DRR130213 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284324 | MDR-TB | lineage2.2.1 | None | SRR6785206 | Sensitive | lineage2.2.1 | None | ERR4800017 | Other | lineage3 | in | SRR28239877 | Sensitive | lineage2.2.1 | None | DRR188840 | Sensitive | lineage2.2.1 | None | ERR2707018 | MDR-TB | lineage4.3.4.2 | cd | ERR7737784 | MDR-TB | lineage4.2.2.2 | None | SRR14164712 | Sensitive | lineage4.3.4.1 | None | ERR2041783 | Pre-XDR-TB | lineage2.2.1 | rs | ERR2041781 | MDR-TB | lineage2.2.1 | rs | SRR29440558 | Sensitive | lineage2.2.1 | None | SRR29539522 | Sensitive | lineage2.2.1;lineage4.8 | None | ERR2517476 | Sensitive | lineage4.8 | nl | ERR5864362 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865442 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794495 | MDR-TB | lineage2.2.1 | None | SRR26111900 | Sensitive | lineage4.8 | None | ERR5864482 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081248 | Sensitive | lineage4.1.2.1 | None | ERR11243565 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284954 | Sensitive | lineage4.1.2.1 | None | DRR034536 | Sensitive | lineage2.2.1 | None |
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