Rv0010c - c.-79C>T


Drug resistance types
56 Sensitive 1 RR-TB 7 HR-TB 57 MDR-TB 41 Pre-XDR-TB 4 XDR-TB 9 Other
lineage Counts
lineage Count
lineage2.2.1 100
lineage4.8 18
lineage4.3.4.2 4
lineage4.3.2 2
lineage1.2.2.2;lineage3;lineage4.4.1.1 1
lineage2.2.1;lineage4.8 1
lineage4.1.3 2
lineage4.5 4
lineage4.6.2.2 5
lineage4.1.2.1 5
La1.6 1
lineage1.1.2 1
lineage4.2.1 2
lineage2.2.1.1 4
lineage4.1.1.3 2
lineage2.2.1.2 2
lineage4.3.4.1 5
lineage4.1 1
lineage4 1
lineage4.2.2.2 2
lineage4.7 3
lineage2.1 1
lineage4.3.3 1
lineage3;lineage4.3.3 1
lineage4.3.4.2.1 2
lineage3 1
lineage4.4.1.1 1
lineage4.1.1.2 1
lineage4.9 1
spoligotype Counts
spoligotype Count
None 175
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR5866108 MDR-TB lineage2.2.1 None
ERR4827791 Sensitive lineage4.8 None
ERR13258452 Pre-XDR-TB lineage2.2.1 None
SRR24256196 MDR-TB lineage2.2.1 None
SRR5184975 MDR-TB lineage2.2.1 None
ERR2707018 MDR-TB lineage4.3.4.2 cd
SRR7516325 Pre-XDR-TB lineage2.2.1 None
ERR5864355 MDR-TB lineage2.2.1 None
ERR11049473 XDR-TB lineage2.2.1 None
SRR29053205 Other lineage2.2.1 None
ERR5865040 Pre-XDR-TB lineage2.2.1 None
ERR5864360 MDR-TB lineage2.2.1 None
ERR6866227 Sensitive lineage4.3.2 None
SRR10040479 MDR-TB lineage2.2.1 None
ERR4830246 Sensitive lineage2.2.1 vn
ERR5865520 MDR-TB lineage2.2.1 None
ERR5864881 Pre-XDR-TB lineage2.2.1 None
SRR5153303 MDR-TB lineage2.2.1 None
ERR768036 Sensitive lineage2.2.1 th
ERR4796787 MDR-TB lineage1.2.2.2;lineage3;lineage4.4.1.1 in
SRR25515426 Pre-XDR-TB lineage2.2.1 None
SRR6832005 Sensitive lineage4.8 None
SRR29539522 Sensitive lineage2.2.1;lineage4.8 None
SRR11443991 MDR-TB lineage4.1.3 None
ERR5864882 Pre-XDR-TB lineage2.2.1 None
SRR5067685 Other lineage4.5 vn
ERR369688 HR-TB lineage4.6.2.2 None
ERR5864359 MDR-TB lineage2.2.1 None
ERR11081248 Sensitive lineage4.1.2.1 None
ERR11268044 Other La1.6 None
SRR21887742 MDR-TB lineage2.2.1 None
SRR29440876 Sensitive lineage2.2.1 None
SRR29772475 Other lineage1.1.2 None
ERR7910902 MDR-TB lineage4.2.1 md
ERR5865038 Pre-XDR-TB lineage2.2.1 None
ERR5864878 Pre-XDR-TB lineage2.2.1 None
SRR24256179 MDR-TB lineage2.2.1 None
SRR7516338 MDR-TB lineage2.2.1 None
ERR5864357 Pre-XDR-TB lineage2.2.1 None
ERR5864358 MDR-TB lineage2.2.1 None
SRR21690894 Sensitive lineage4.8 None
SRR10828196 Pre-XDR-TB lineage2.2.1 None
ERR5865039 Pre-XDR-TB lineage2.2.1 None
ERR5865263 XDR-TB lineage2.2.1 None
ERR5865608 MDR-TB lineage2.2.1 None
ERR3276026 HR-TB lineage4.1.2.1 nl
ERR3275311 Sensitive lineage4.8 nl
SRR29050628 Sensitive lineage2.2.1.1 None
ERR4811221 Sensitive lineage2.2.1 cn
SRR13583486 HR-TB lineage4.1.1.3 None
SRR14801640 HR-TB lineage2.2.1 None
SRR27980486 MDR-TB lineage4.3.4.2 None
SRR21658389 Sensitive lineage2.2.1.1 None
SRR28239942 MDR-TB lineage2.2.1 None
ERR5865441 Pre-XDR-TB lineage2.2.1 None
SRR29231689 MDR-TB lineage4.3.4.2 None
SRR29273898 Other lineage4.8 None
ERR5864485 Pre-XDR-TB lineage2.2.1 None
SRR5535808 MDR-TB lineage4.6.2.2 None
ERR144629 Sensitive lineage4.8 ru
SRR26937092 MDR-TB lineage2.2.1 None
ERR5864880 Pre-XDR-TB lineage2.2.1 None
ERR4798688 Other lineage2.2.1.2 in
ERR5865262 XDR-TB lineage2.2.1 None
ERR4831122 MDR-TB lineage2.2.1 de
SRR29273655 MDR-TB lineage4.8 None
ERR5864364 MDR-TB lineage2.2.1 None
ERR11489034 MDR-TB lineage4.3.4.1 None
SRR7516326 Pre-XDR-TB lineage2.2.1 None
SRR28044671 Sensitive lineage4.1.2.1 None
ERR2517476 Sensitive lineage4.8 nl
SRR13232609 Sensitive lineage4.1 None
ERR13284324 MDR-TB lineage2.2.1 None
ERR2446553 Sensitive lineage4.8 nl
ERR2517418 Sensitive lineage4.8 nl
ERR3275542 Sensitive lineage4.8 nl
SRR6785206 Sensitive lineage2.2.1 None
SRR29441079 Sensitive lineage2.2.1 None
ERR13291187 Other lineage2.2.1 None
ERR5865261 XDR-TB lineage2.2.1 None
ERR4195243 Sensitive lineage4 None
DRR188840 Sensitive lineage2.2.1 None
ERR7737784 MDR-TB lineage4.2.2.2 None
ERR11489035 MDR-TB lineage4.3.4.1 None
ERR4423648 MDR-TB lineage4.6.2.2 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR7516339 MDR-TB lineage2.2.1 None
SRR14164712 Sensitive lineage4.3.4.1 None
SRR11033721 MDR-TB lineage2.2.1 None
ERR11069109 MDR-TB lineage4.7 None
SRR5073605 Other lineage2.2.1 vn
SRR11444077 Sensitive lineage4.6.2.2 None
ERR5865442 Pre-XDR-TB lineage2.2.1 None
SRR26111900 Sensitive lineage4.8 None
ERR11243565 Pre-XDR-TB lineage2.2.1 None
SRR11662296 MDR-TB lineage2.1 None
ERR5864482 Pre-XDR-TB lineage2.2.1 None
ERR5865470 MDR-TB lineage2.2.1 None
SRR28119836 Sensitive lineage2.2.1.1 None
DRR034536 Sensitive lineage2.2.1 None
SRR21690748 HR-TB lineage4.1.2.1 None
ERR4830086 Sensitive lineage4.8 None
ERR9119309 Sensitive lineage2.2.1 None
ERR2229724 Sensitive lineage4.8 None
ERR4797166 Pre-XDR-TB lineage4.2.2.2 in
SRR22251946 Sensitive lineage2.2.1 None
ERR5866109 MDR-TB lineage2.2.1 None
ERR4423649 MDR-TB lineage4.6.2.2 None
SRR7657746 MDR-TB lineage2.2.1 None
SRR28858550 Sensitive lineage4.5 None
ERR5865521 MDR-TB lineage2.2.1 None
SRR5709765 Pre-XDR-TB lineage2.2.1 th
ERR13285155 MDR-TB lineage4.7 None
ERR5864483 Pre-XDR-TB lineage2.2.1 None
SRR19303785 Sensitive lineage4.3.3 None
SRR26399447 Sensitive lineage2.2.1 None
SRR29051280 HR-TB lineage4.1.1.3 None
ERR13284954 Sensitive lineage4.1.2.1 None
SRR7516372 Pre-XDR-TB lineage2.2.1 None
ERR5864354 MDR-TB lineage2.2.1 None
ERR5864363 Pre-XDR-TB lineage2.2.1 None
ERR5865480 MDR-TB lineage2.2.1 None
ERR5865609 MDR-TB lineage2.2.1 None
DRR130145 Pre-XDR-TB lineage2.2.1 None
ERR4799987 Sensitive lineage3;lineage4.3.3 None
ERR11044575 MDR-TB lineage2.2.1 None
SRR29440604 Sensitive lineage2.2.1 None
SRR25515082 Pre-XDR-TB lineage2.2.1 None
SRR6484989 MDR-TB lineage2.2.1 None
DRR130213 Pre-XDR-TB lineage2.2.1 None
ERR2041783 Pre-XDR-TB lineage2.2.1 rs
ERR5865037 Pre-XDR-TB lineage2.2.1 None
SRR29096221 Sensitive lineage4.3.4.2.1 None
SRR26937114 MDR-TB lineage2.2.1 None
SRR21277465 Sensitive lineage2.2.1 None
ERR5864487 Pre-XDR-TB lineage2.2.1 None
ERR5864879 Pre-XDR-TB lineage2.2.1 None
SRR28239877 Sensitive lineage2.2.1 None
ERR4821184 Sensitive lineage4.3.4.2.1 None
SRR28045435 MDR-TB lineage2.2.1.1 None
ERR4800017 Other lineage3 in
ERR5864017 MDR-TB lineage2.2.1 None
ERR5864486 Pre-XDR-TB lineage2.2.1 None
ERR978801 Sensitive lineage4.8 gl
ERR10762414 MDR-TB lineage4.2.1 None
SRR10040514 MDR-TB lineage4.5 None
SRR14802072 Sensitive lineage2.2.1 None
ERR5865481 MDR-TB lineage2.2.1 None
SRR29440558 Sensitive lineage2.2.1 None
ERR538430 Sensitive lineage2.2.1.2 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR14164577 Sensitive lineage4.7 None
ERR2446389 Sensitive lineage4.8 nl
SRR7516440 Sensitive lineage4.8 None
ERR5864484 Pre-XDR-TB lineage2.2.1 None
SRR24256100 MDR-TB lineage2.2.1 None
ERR5864362 Pre-XDR-TB lineage2.2.1 None
SRR7276686 Sensitive lineage4.4.1.1 None
ERR3794495 MDR-TB lineage2.2.1 None
SRR28351537 Pre-XDR-TB lineage4.1.1.2 None
SRR15316443 Pre-XDR-TB lineage2.2.1 None
SRR11662142 Pre-XDR-TB lineage2.2.1 None
ERR2041781 MDR-TB lineage2.2.1 rs
SRR14164946 Sensitive lineage4.3.4.2 None
ERR5865471 MDR-TB lineage2.2.1 None
ERR551041 Sensitive lineage4.9 de
ERR3276290 Sensitive lineage4.8 nl
SRR7516375 Pre-XDR-TB lineage2.2.1 None
ERR11043012 HR-TB lineage4.1.3 None
ERR5864356 Pre-XDR-TB lineage2.2.1 None
ERR718400 Sensitive lineage4.5 th
ERR5865041 Pre-XDR-TB lineage2.2.1 None
SRR23340105 Pre-XDR-TB lineage2.2.1 None
ERR7361917 Sensitive lineage4.3.2 None
ERR5864361 Pre-XDR-TB lineage2.2.1 None