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SRA data
Rv0407
- c.-124_-71delGGAGCGAGCGCGAGCGCGGCAAGCCGGGTGCCGCGGGTCGCGACCATGGGATAT
Drug resistance types
9 Sensitive
0 RR-TB
0 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.3.3
4
lineage1.2.2.2
3
lineage4.7
2
lineage2.2.1
2
lineage4.1.1.3
1
Showing 1 to 5 of 5 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
12
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR10680032
MDR-TB
lineage2.2.1
None
ERR10680119
MDR-TB
lineage2.2.1
None
ERR11068866
Sensitive
lineage4.7
None
ERR2514228
Sensitive
lineage4.7
gb
ERR4812211
Sensitive
lineage4.3.3
pe
ERR4813497
Sensitive
lineage4.3.3
None
ERR4816582
Sensitive
lineage4.1.1.3
gb
ERR6866203
Sensitive
lineage4.3.3
None
ERR6866566
Sensitive
lineage4.3.3
None
SRR2100542
Other
lineage1.2.2.2
None
Showing 1 to 10 of 12 entries
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