TB-Profiler
Home
Upload
SRA data
Rv0407
- c.426G>A
Drug resistance types
1 Sensitive
1 RR-TB
8 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
M.canetti;lineage2.1;lineage4.9
2
La3;M.canetti;lineage2.1;lineage4.9
2
La1.7;M.canetti;lineage4.9
2
lineage2.1;lineage4.3.2
1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
1
La3;lineage4.9
1
M.canetti;lineage2.1
1
M.canetti;lineage4.9
1
lineage4.1.2.1
1
Showing 1 to 10 of 16 entries
Previous
1
2
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
19
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR10465857
Sensitive
lineage4.1.2.1
None
ERR124652
HR-TB
La3;M.canetti;lineage2.1;lineage4.9
None
ERR126608
HR-TB
La3;M.canetti;lineage2.1;lineage4.9
None
ERR1873393
HR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR1873396
Pre-XDR-TB
M.canetti;lineage2.2
None
ERR2693239
RR-TB
M.canetti;lineage2.1;lineage4
None
ERR323040
HR-TB
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
None
ERR323041
HR-TB
M.canetti;lineage2.1
None
ERR473277
HR-TB
La3;M.canetti;lineage4.9
None
ERR5311091
Other
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
None
Showing 1 to 10 of 19 entries
Previous
1
2
Next