Rv0635 - p.Cys61Ser
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
23 HR-TB
123 MDR-TB
35 Pre-XDR-TB
5 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 13 |
| lineage4.2.2.2 | 9 |
| lineage4.6.1.2 | 45 |
| lineage4.1.1.3 | 19 |
| lineage3 | 24 |
| lineage4.3.4.2 | 10 |
| lineage4.4 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1.1.1 | 21 |
| lineage4.4.1.1 | 2 |
| lineage4.2.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.1.3 | 3 |
| lineage4.3.4.2.1 | 7 |
| lineage1.2.2.1 | 6 |
| lineage2.2.1 | 1 |
| lineage4.3.4.1 | 5 |
| lineage1.1.2 | 1 |
| lineage1.1.3.1 | 7 |
| lineage4.5 | 1 |
| lineage3;lineage4.1.1.3 | 1 |
| lineage4.3.2 | 1 |
| lineage3.1.2.1 | 2 |
| lineage2.1 | 2 |
| lineage4.1.2.1;lineage4.3.4.1 | 1 |
| lineage4.6.2.2 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 187 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4025041 | MDR-TB | lineage4 | None | ERR13261100 | XDR-TB | lineage4.2.2.2 | None | SRR29230786 | MDR-TB | lineage4.6.1.2 | None | SRR29231743 | MDR-TB | lineage4.1.1.3 | None | SRR29016739 | MDR-TB | lineage3 | None | SRR3105768 | Pre-XDR-TB | lineage3 | None | ERR2707070 | MDR-TB | lineage4.6.1.2 | cd | ERR2707199 | MDR-TB | lineage4.3.4.2 | cd | ERR2707020 | MDR-TB | lineage4.6.1.2 | cd | ERR2707060 | MDR-TB | lineage4.6.1.2 | cd | ERR2707126 | MDR-TB | lineage4.1.1.3 | cd | ERR2706948 | MDR-TB | lineage4.6.1.2 | cd | ERR2707037 | MDR-TB | lineage4.1.1.3 | cd | ERR2707057 | MDR-TB | lineage4.6.1.2 | cd | ERR2707119 | MDR-TB | lineage4.1.1.3 | cd | ERR2707084 | MDR-TB | lineage4.6.1.2 | cd | ERR2706990 | MDR-TB | lineage4.6.1.2 | cd | ERR2707026 | MDR-TB | lineage4.6.1.2 | cd | ERR2707012 | MDR-TB | lineage4.6.1.2 | cd | ERR2706921 | MDR-TB | lineage4.6.1.2 | cd | ERR2707123 | MDR-TB | lineage4.6.1.2 | cd | ERR4812681 | MDR-TB | lineage4 | pe | ERR2706925 | MDR-TB | lineage4.6.1.2 | cd | ERR2706974 | MDR-TB | lineage4.3.4.2 | cd | ERR2707132 | MDR-TB | lineage4.6.1.2 | cd | ERR2706919 | MDR-TB | lineage4.6.1.2 | cd | ERR2707196 | MDR-TB | lineage4.3.4.2 | cd | ERR2707024 | MDR-TB | lineage4.6.1.2 | cd | ERR4830920 | Pre-XDR-TB | lineage4.1.1.3 | np | ERR3132106 | MDR-TB | lineage4.4 | None | SRR11662619 | MDR-TB | lineage1.1.1 | None | SRR1180436 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR2512585 | HR-TB | lineage4.2.2.2 | gb | SRR5341276 | MDR-TB | lineage3 | in | ERR4553887 | MDR-TB | lineage4 | None | SRR29017153 | MDR-TB | lineage4.4.1.1 | None | ERR4553942 | MDR-TB | lineage4 | None | ERR6397152 | MDR-TB | lineage4.2.2.1 | None | ERR1034679 | MDR-TB | lineage4.3.3 | co | ERR13260594 | MDR-TB | lineage4 | None | ERR2446075 | HR-TB | lineage3 | nl | ERR13284754 | Pre-XDR-TB | lineage4.1.3 | None | ERR7801214 | HR-TB | lineage4.3.4.2.1 | None | ERR4423679 | RR-TB | lineage3 | None | ERR552991 | MDR-TB | lineage4.3.4.2.1 | None | SRR29093899 | HR-TB | lineage3 | None | SRR29055952 | MDR-TB | lineage1.2.2.1 | None | SRR1174313 | MDR-TB | lineage4.6.1.2 | None | ERR4553470 | MDR-TB | lineage4 | None | SRR29016812 | MDR-TB | lineage4 | None | SRR21690328 | HR-TB | lineage3 | None | SRR29231685 | MDR-TB | lineage4.6.1.2 | None | SRR1183146 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR11662354 | MDR-TB | lineage2.2.1 | None | SRR29055666 | MDR-TB | lineage1.2.2.1 | None | ERR13253294 | MDR-TB | lineage4.1.1.3 | None | ERR6326069 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR1181115 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR7902584 | HR-TB | lineage1.1.2 | None | SRR29231815 | MDR-TB | lineage4.6.1.2 | None | SAMN02053762 | MDR-TB | lineage4.1.1.1 | None | SRR29017057 | MDR-TB | lineage1.1.3.1 | None | ERR2510698 | MDR-TB | lineage4.5 | pk | SRR6964569 | Pre-XDR-TB | lineage3 | None | SRR29231795 | MDR-TB | lineage4.6.1.2 | None | SRR22251101 | MDR-TB | lineage4.1.1.3 | None | ERR7801216 | HR-TB | lineage4.3.4.2.1 | None | ERR13285091 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4798120 | XDR-TB | lineage4.2.2.2 | in | ERR1654664 | MDR-TB | lineage4.6.1.2 | None | ERR4797157 | MDR-TB | lineage4.2.2.2 | in | SRR15465773 | Pre-XDR-TB | lineage3;lineage4.1.1.3 | None | ERR4797648 | XDR-TB | lineage4.2.2.2 | in | SRR1181354 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR4798185 | XDR-TB | lineage4.2.2.2 | in | ERR4822341 | MDR-TB | lineage4.1.1.3 | jp | ERR3014592 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR4872095 | MDR-TB | lineage4.3.4.1 | None | SRR6397779 | HR-TB | lineage3 | ca | SRR28393306 | MDR-TB | lineage4 | None | SRR28351253 | Pre-XDR-TB | lineage3 | None | SRR6153009 | HR-TB | lineage4.2.2.2 | ca | SRR2100400 | MDR-TB | lineage1.2.2.1 | None | ERR1193892 | MDR-TB | lineage4.3.4.2.1 | sz | ERR1199096 | MDR-TB | lineage4.6.1.2 | cd | ERR2516302 | MDR-TB | lineage4.3.2 | be | ERR2516606 | MDR-TB | lineage4.1.3 | nl | ERR4423720 | MDR-TB | lineage4.3.4.2 | None | SRR29231840 | MDR-TB | lineage4.6.1.2 | None | ERR1654675 | MDR-TB | lineage4.6.1.2 | None | ERR038752 | MDR-TB | lineage3.1.2.1 | ug | ERR181727 | HR-TB | lineage4.3.4.1 | mw | SRR29017611 | Pre-XDR-TB | lineage4 | None | SRR29231725 | MDR-TB | lineage4.6.1.2 | None | ERR1654693 | MDR-TB | lineage4.6.1.2 | None | ERR6397206 | MDR-TB | lineage3 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | ERR6397205 | MDR-TB | lineage3 | None | SRR28394260 | MDR-TB | lineage4 | None | ERR11082668 | Pre-XDR-TB | lineage4.1.3 | None | SRR1180201 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR833150 | MDR-TB | lineage4.1.1.1 | None | SRR26056405 | HR-TB | lineage4.1.1.3 | None | SRR29231739 | MDR-TB | lineage4.6.1.2 | None | SRR29055623 | MDR-TB | lineage1.2.2.1 | None | SRR29230780 | MDR-TB | lineage4.6.1.2 | None | SRR1019163 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR833035 | MDR-TB | lineage4.1.1.1 | None | ERR3256127 | MDR-TB | lineage4.1.1.3 | ph | ERR3256128 | MDR-TB | lineage4.1.1.3 | ph | ERR13276406 | MDR-TB | lineage4.3.4.2 | None | ERR11080930 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4457805 | MDR-TB | lineage4 | None | ERR1654682 | MDR-TB | lineage4.6.1.2 | None | ERR11080829 | MDR-TB | lineage4.3.4.2 | None | SRR29055935 | MDR-TB | lineage1.2.2.1 | None | SRR29231844 | MDR-TB | lineage4.6.1.2 | None | SRR29051440 | HR-TB | lineage2.1 | None | ERR5530521 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR29231653 | MDR-TB | lineage4.6.1.2 | None | SRR29231693 | MDR-TB | lineage4.3.4.2 | None | ERR13285392 | HR-TB | lineage3 | None | SRR29231679 | MDR-TB | lineage4.6.1.2 | None | SRR1181142 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR1180425 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR29231542 | MDR-TB | lineage4.6.1.2 | None | SRR26558624 | Pre-XDR-TB | lineage3 | None | ERR4553859 | MDR-TB | lineage3 | None | ERR4799537 | MDR-TB | lineage3 | None | ERR4799793 | XDR-TB | lineage4.2.2.2 | in | SRR5338517 | MDR-TB | lineage4.1.1.3 | None | ERR4553599 | MDR-TB | lineage4.4.1.1 | None | SAMN02585974 | Pre-XDR-TB | lineage4.1.1.1 | za | SAMN02585971 | Pre-XDR-TB | lineage4.1.1.1 | za | ERR1034680 | Pre-XDR-TB | lineage4.1.2.1;lineage4.3.4.1 | co | SRR6397331 | HR-TB | lineage3 | ca | ERR7801215 | HR-TB | lineage4.3.4.2.1 | None | SRR1140938 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR1199098 | MDR-TB | lineage4.6.1.2 | cd | ERR1199103 | MDR-TB | lineage4.6.1.2 | cd | ERR1199105 | MDR-TB | lineage4.6.1.2 | cd | ERR1199111 | MDR-TB | lineage4.6.1.2 | cd | ERR1199113 | MDR-TB | lineage4.6.1.2 | cd | ERR2516751 | MDR-TB | lineage1.2.2.1 | gb | ERR2516509 | MDR-TB | lineage4 | pe | SRR6797474 | MDR-TB | lineage1.1.3.1 | None | SRR29017141 | MDR-TB | lineage3 | None | SRR1180200 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR1184020 | Pre-XDR-TB | lineage4.1.1.1 | None | SAMN02350487 | Pre-XDR-TB | lineage4.1.1.1 | za | SAMN02585968 | Pre-XDR-TB | lineage4.1.1.1 | za | SRR29017673 | MDR-TB | lineage1.1.3.1 | None | ERR13260084 | MDR-TB | lineage4.1.1.3 | None | SRR29231676 | MDR-TB | lineage4.6.1.2 | None | ERR2517289 | HR-TB | lineage3 | nl | SRR1183131 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR8774401 | MDR-TB | lineage4.3.4.2 | None | ERR552992 | MDR-TB | lineage4.3.4.2.1 | None | ERR552990 | MDR-TB | lineage4.3.4.2.1 | None | ERR2843485 | HR-TB | lineage2.1 | None | ERR4553493 | MDR-TB | lineage1.1.3.1 | None | SRR3105775 | MDR-TB | lineage3 | None | ERR9119501 | MDR-TB | lineage4.3.4.1 | None | ERR1654669 | MDR-TB | lineage4.6.1.2 | None | SRR11444233 | HR-TB | lineage4.6.2.2 | None | SRR29231001 | MDR-TB | lineage4.6.1.2 | None | SRR1173544 | MDR-TB | lineage4.6.1.2 | None | SRR29017094 | Pre-XDR-TB | lineage4 | None | SRR29440814 | HR-TB | lineage4.1.1.3 | None | SRR29017162 | MDR-TB | lineage1.1.3.1 | None | ERR3275597 | HR-TB | lineage3 | nl | ERR1654674 | MDR-TB | lineage4.6.1.2 | None | DRR130056 | MDR-TB | lineage4.1.1.3 | None | ERR3256238 | MDR-TB | lineage4.1.1.3 | ph | ERR4553530 | HR-TB | lineage1.1.3.1 | None | SRR29231826 | MDR-TB | lineage4.6.1.2 | None | ERR4553648 | MDR-TB | lineage1.1.3.1 | None | SRR29231835 | MDR-TB | lineage4.3.4.2 | None | SRR1181326 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR29231113 | Pre-XDR-TB | lineage3 | None | ERR4553818 | MDR-TB | None | SRR29231763 | MDR-TB | lineage4.3.4.2 | None | SRR29231688 | MDR-TB | lineage4.1.1.3 | None | SRR29016835 | MDR-TB | lineage3.1.2.1 | None | SRR1181173 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR22251746 | HR-TB | lineage3 | None | ERR4423739 | MDR-TB | lineage3 | None |
|---|
