ERR11081181
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR4813020
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1165398
|
MDR-TB
|
lineage4.7
|
None
|
SRR7652996
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4810463
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR28393508
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR5864807
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR13290372
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR751585
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4025023
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4025054
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR12117995
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR12420388
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1181198
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR12420591
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28394022
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287481
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287681
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR1144735
|
MDR-TB
|
lineage4.7
|
None
|
ERR4813675
|
MDR-TB
|
lineage2.2.1;lineage4.3.3
|
None
|
ERR13260678
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812730
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR6866065
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR3105792
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR9992841
|
XDR-TB
|
lineage4.3.3
|
None
|
ERR751551
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR28393506
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4797367
|
MDR-TB
|
lineage4.3.3
|
in
|
SRR1162835
|
MDR-TB
|
lineage4.7
|
None
|
SRR25827517
|
Pre-XDR-TB
|
lineage3.1.2;lineage4.2.2.2;lineage4.3.3
|
None
|
ERR751372
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287602
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR10748522
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR3544740
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR25827341
|
Pre-XDR-TB
|
lineage3.1.2;lineage4.3.3
|
None
|
ERR3287464
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR1180435
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR6866055
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2510834
|
MDR-TB
|
lineage2.2.1
|
it
|
ERR4811981
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR13312537
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN01925686
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR16088146
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR25207215
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13312535
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR833097
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1166914
|
MDR-TB
|
lineage4.7
|
None
|
ERR4025003
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR13312531
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR751600
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR13312533
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1011484
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR23340104
|
MDR-TB
|
lineage4.8
|
None
|
ERR5865895
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR10680119
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3105731
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4553547
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2653151
|
HR-TB
|
lineage4.3.3
|
None
|
ERR1023402
|
MDR-TB
|
lineage4.7
|
None
|
ERR8975742
|
XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9993243
|
XDR-TB
|
lineage4.3.3
|
None
|
ERR2516457
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR12117911
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2653139
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1163040
|
MDR-TB
|
lineage4.7
|
None
|
SRR16088527
|
XDR-TB
|
lineage4.3.3
|
None
|
ERR6865410
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4798635
|
Pre-XDR-TB
|
lineage4.3.3
|
in
|
ERR3287457
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR1035058
|
MDR-TB
|
lineage2.2.1
|
za
|
SRR5153332
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR751631
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR5864804
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1166808
|
MDR-TB
|
lineage4.7
|
None
|
ERR2707227
|
MDR-TB
|
lineage4.3.4.1
|
cd
|
ERR5865894
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287690
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287618
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13290373
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR751445
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751624
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR1181353
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR28393791
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393274
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR13290370
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR13290447
|
MDR-TB
|
lineage4.7
|
None
|
ERR12117962
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR29772698
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR9993209
|
XDR-TB
|
lineage4.1.1.3
|
None
|
ERR13260690
|
MDR-TB
|
lineage4.3.2;lineage4.3.3
|
None
|
ERR2124108
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR5864806
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN02350441
|
MDR-TB
|
lineage4.3.3
|
za
|
ERR4808942
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
SRR12420341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13312534
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR13312538
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN02053803
|
MDR-TB
|
lineage4.3.3
|
za
|
SRR1180395
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR2653077
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR12117922
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR5864812
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR29055896
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR10112843
|
XDR-TB
|
lineage4.1.1.3
|
None
|
ERR4813294
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR1173201
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813504
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28888051
|
XDR-TB
|
lineage4.3.3
|
None
|
ERR5865896
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751567
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR17234905
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1062855
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1144795
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR847784
|
MDR-TB
|
lineage4.3.3
|
za
|
ERR6358987
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR3105780
|
MDR-TB
|
lineage3
|
None
|
ERR10112840
|
XDR-TB
|
lineage4.1.1.3
|
None
|
ERR5864814
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287649
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2510251
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4813059
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02414943
|
MDR-TB
|
lineage4.7
|
se
|
ERR5864803
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR29055692
|
MDR-TB
|
lineage4.1.2
|
None
|
SRR28393720
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2124105
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287642
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813146
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1184310
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR5979441
|
MDR-TB
|
lineage3.1
|
None
|
ERR2653078
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR13276292
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR13290448
|
MDR-TB
|
lineage4.7
|
None
|
ERR4596924
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SAMN02414918
|
MDR-TB
|
lineage4.7
|
se
|
ERR3287414
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR1146421
|
MDR-TB
|
lineage4.7
|
None
|
SRR1166936
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR5864810
|
XDR-TB
|
lineage4.3.3
|
None
|
ERR751621
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR25628596
|
MDR-TB
|
lineage4.5
|
None
|
SRR28393269
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02414940
|
MDR-TB
|
lineage4.7
|
se
|
SRR833048
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813305
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812175
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR10112876
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SAMN02053806
|
MDR-TB
|
lineage4.3.3
|
za
|
ERR5758427
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR751612
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813194
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR833177
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR3082121
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827670
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1162850
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR5864805
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR23340064
|
MDR-TB
|
lineage4.8
|
None
|
ERR5864813
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR29231837
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR12420479
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13312530
|
Pre-XDR-TB
|
lineage4.2.1;lineage4.3.3
|
None
|
SRR28393256
|
RR-TB
|
lineage4.1.1.3
|
None
|
ERR4811754
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4811973
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813483
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2516934
|
MDR-TB
|
lineage4.3.3
|
gb
|
ERR10680032
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1167141
|
MDR-TB
|
lineage4.7
|
None
|
ERR4812894
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13290446
|
MDR-TB
|
lineage4.7
|
None
|
ERR4811788
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4798690
|
Pre-XDR-TB
|
lineage3
|
in
|
SAMN02585962
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
ERR2707152
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR5864808
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR3287466
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR6848322
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR13290449
|
MDR-TB
|
lineage4.7
|
None
|
ERR5864809
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR10397238
|
Pre-XDR-TB
|
lineage4.2.1;lineage4.3.3
|
None
|
ERR4813068
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813274
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR1163015
|
MDR-TB
|
lineage4.7
|
None
|
SAMN02414892
|
MDR-TB
|
lineage4.3.4.1
|
se
|
ERR2516783
|
MDR-TB
|
lineage4.3.3
|
gb
|
ERR6865465
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1196534
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751423
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR13312539
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR757178
|
MDR-TB
|
lineage4.1.2.1.1
|
ar
|
ERR12118045
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1165415
|
MDR-TB
|
lineage4.7
|
None
|
SRR29772576
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR1162750
|
MDR-TB
|
lineage4.7
|
None
|
SRR13870379
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR7911742
|
MDR-TB
|
lineage4.3.3
|
us
|
ERR4813672
|
MDR-TB
|
lineage2.2.1;lineage4.3.3;lineage4.4.1.1
|
None
|
ERR4811876
|
Pre-XDR-TB
|
lineage4.4.1.1
|
pe
|
SRR3085356
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR12117963
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR22461629
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR5864811
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR23340121
|
MDR-TB
|
lineage4.8
|
None
|
SAMN02586011
|
MDR-TB
|
lineage4.3.3
|
za
|
ERR4798186
|
Pre-XDR-TB
|
lineage4.3.3
|
in
|
ERR6358727
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR5709865
|
Pre-XDR-TB
|
lineage2.2.1
|
th
|
SRR13312532
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR30180462
|
MDR-TB
|
lineage2.1
|
None
|
SRR19276642
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR3544717
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1167090
|
MDR-TB
|
lineage4.7
|
None
|
ERR4024720
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812019
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR9993031
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR502886
|
MDR-TB
|
lineage2.2.1
|
None
|