lineage | Count |
---|---|
lineage2.2.1.1 | 3 |
lineage2.2.1 | 30 |
lineage4.4.1.2 | 1 |
lineage1.1.3.1 | 1 |
lineage3 | 3 |
lineage1.2.2.2 | 2 |
lineage4.1.3 | 5 |
lineage4.3.2 | 10 |
lineage6.2.2 | 1 |
lineage3.1.2.1 | 1 |
lineage4.5 | 1 |
lineage4.3.4.1 | 5 |
lineage4.1.1 | 8 |
lineage4.2.2.1 | 1 |
lineage2.2.1.2 | 5 |
lineage4.1.2.1;lineage2.2.1 | 1 |
lineage4.3.3 | 1 |
lineage2.2.2 | 2 |
lineage2.1 | 3 |
lineage4.1.2.1 | 4 |
lineage4.2.2 | 1 |
lineage3.1.2 | 1 |
lineage4.1.1.1 | 1 |
lineage2.2 | 1 |
lineage4.1.2 | 1 |
spoligotype | Count |
---|---|
None | 93 |
ID | Drug resistance | Lineage | Country iso2 | ERR4828822 | MDR-TB | lineage2.2.1.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4832006 | MDR-TB | lineage2.2.1 | vn | ERR4829863 | MDR-TB | lineage4.4.1.2 | it | SRR6485101 | Pre-XDR-TB | lineage2.2.1 | None | SRR6797753 | RR-TB | lineage1.1.3.1 | None | SRR6930899 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6964603 | Pre-XDR-TB | lineage3 | None | SRR6824356 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6964672 | Pre-XDR-TB | lineage3 | None | SRR7585423 | Pre-XDR-TB | lineage1.2.2.2 | in | SRR6824658 | MDR-TB | lineage2.2.1 | cn | SRR1723594 | MDR-TB | lineage2.2.1 | cn | SRR8651591 | MDR-TB | lineage2.2.1.1 | cn | SRR998839 | MDR-TB | lineage4.1.3 | None | SRR998838 | MDR-TB | lineage4.1.3 | None | DRR130112 | MDR-TB | lineage2.2.1 | None | SRR998840 | MDR-TB | lineage4.1.3 | None | SRR998837 | MDR-TB | lineage4.1.3 | None | ERR1034856 | MDR-TB | lineage2.2.1 | pt | ERR019562 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798772 | Pre-XDR-TB | lineage1.2.2.2 | in | ERR1035224 | MDR-TB | lineage2.2.1 | pt | ERR3287458 | MDR-TB | lineage4.3.2 | None | ERR10680134 | MDR-TB | lineage6.2.2 | None | ERR4553487 | RR-TB | lineage3.1.2.1 | None | ERR4810486 | Pre-XDR-TB | lineage2.2.1 | cn | ERR751934 | RR-TB | lineage2.2.1 | th | ERR4810472 | MDR-TB | lineage4.5 | cn | ERR4810963 | MDR-TB | lineage2.2.1 | cn | ERR9907693 | MDR-TB | lineage4.3.4.1 | None | ERR9907668 | MDR-TB | lineage4.3.2 | None | ERR9029860 | MDR-TB | lineage4.3.2 | None | ERR9907758 | MDR-TB | lineage4.3.2 | None | ERR9907709 | MDR-TB | lineage4.3.4.1 | None | ERR9907717 | MDR-TB | lineage4.3.4.1 | None | ERR9907766 | MDR-TB | lineage4.3.4.1 | None | ERR9907767 | MDR-TB | lineage4.3.2 | None | ERR9907782 | MDR-TB | lineage4.3.2 | None | ERR9907779 | MDR-TB | lineage4.3.2 | None | SRR10185947 | MDR-TB | lineage2.2.1 | None | ERR9907784 | MDR-TB | lineage4.3.2 | None | ERR9907787 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR9907788 | MDR-TB | lineage4.3.2 | None | ERR9907790 | MDR-TB | lineage4.3.2 | None | SRR1167340 | MDR-TB | lineage4.1.1 | None | SRR1165652 | MDR-TB | lineage4.1.1 | None | SRR1165656 | MDR-TB | lineage4.1.1 | None | SRR1169145 | MDR-TB | lineage4.1.1 | None | SRR1167369 | MDR-TB | lineage4.1.1 | None | SRR1169196 | MDR-TB | lineage4.1.1 | None | SRR1175072 | RR-TB | lineage2.2.1 | None | SRR1172215 | MDR-TB | lineage4.1.1 | None | SRR1172974 | RR-TB | lineage2.2.1 | None | SRR1172177 | MDR-TB | lineage4.1.1 | None | SRR1184394 | RR-TB | lineage2.2.1 | None | SRR1196702 | RR-TB | lineage2.2.1 | None | SRR16149133 | MDR-TB | lineage4.2.2.1 | None | SRR12142429 | MDR-TB | lineage2.2.1 | None | SRR15465768 | MDR-TB | lineage2.2.1.2 | None | SRR11972450 | MDR-TB | lineage2.2.1 | None | SRR15506901 | MDR-TB | lineage2.2.1.2 | None | SRR16088240 | MDR-TB | lineage4.1.2.1;lineage2.2.1 | None | SRR19320515 | RR-TB | lineage4.3.3 | None | SRR20969549 | MDR-TB | lineage2.2.2 | None | SRR20969663 | MDR-TB | lineage2.1 | None | SRR21277167 | MDR-TB | lineage2.2.1.1 | None | SRR22536483 | MDR-TB | lineage4.1.2.1 | None | SRR21277604 | MDR-TB | lineage2.2.2 | None | SRR22536494 | MDR-TB | lineage4.1.2.1 | None | SRR22528546 | MDR-TB | lineage4.1.2.1 | None | ERR11082706 | MDR-TB | lineage2.1 | None | ERR11082097 | MDR-TB | lineage4.1.2.1 | None | SRR2024916 | MDR-TB | lineage2.2.1 | cn | ERR3275774 | MDR-TB | lineage4.2.2 | nl | ERR015616 | Pre-XDR-TB | lineage2.2.1 | ru | ERR2510256 | Pre-XDR-TB | lineage3 | pk | ERR2516917 | MDR-TB | lineage2.2.1.2 | gb | ERR2516935 | MDR-TB | lineage2.2.1.2 | gb | ERR2510544 | MDR-TB | lineage3.1.2 | pk | SAMN02586096 | RR-TB | lineage2.2.1 | za | SRR1723454 | Pre-XDR-TB | lineage2.2.1 | cn | ERR275216 | MDR-TB | lineage2.2.1 | pt | SAMN02403610 | MDR-TB | lineage4.1.1.1 | None | ERR2517097 | MDR-TB | lineage2.2.1.2 | gb | ERR2679314 | MDR-TB | lineage4.1.3 | None | SRR20969770 | MDR-TB | lineage2.2 | None | ERR4830595 | MDR-TB | lineage2.2.1 | tm | SRR5894883 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828070 | MDR-TB | lineage2.2.1 | None | SRR5817473 | MDR-TB | lineage2.1 | au | ERR4829486 | Pre-XDR-TB | lineage4.1.2 | it |
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