lineage | Count |
---|---|
lineage2.2.1 | 66 |
lineage4.1.1.3 | 1 |
lineage4.9 | 2 |
lineage1.2.1.2.1 | 2 |
lineage4.3.2.1 | 1 |
lineage4.6.2.2 | 2 |
lineage5.1.5 | 1 |
1 | |
lineage4.3.4.1 | 1 |
lineage4.1.2.1 | 2 |
lineage3 | 1 |
lineage2.2.1.1 | 3 |
lineage4.1.1 | 1 |
lineage4.3.2 | 1 |
lineage4.3.4.2.1 | 2 |
spoligotype | Count |
---|---|
None | 87 |
ID | Drug resistance | Lineage | Country iso2 | SAMN03246242 | MDR-TB | lineage2.2.1 | cn | ERR2515248 | RR-TB | lineage4.1.1.3 | za | ERR4828057 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827587 | MDR-TB | lineage2.2.1 | None | ERR4828019 | MDR-TB | lineage2.2.1 | None | ERR4827884 | MDR-TB | lineage2.2.1 | None | ERR4827885 | MDR-TB | lineage2.2.1 | None | ERR4827447 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828010 | MDR-TB | lineage2.2.1 | None | ERR4822401 | Pre-XDR-TB | lineage2.2.1 | ua | ERR4827976 | Pre-XDR-TB | lineage2.2.1 | None | ERR2677464 | MDR-TB | lineage2.2.1 | de | ERR4827923 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828016 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828000 | MDR-TB | lineage2.2.1 | None | ERR4827488 | MDR-TB | lineage2.2.1 | None | ERR4828045 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828079 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828075 | MDR-TB | lineage2.2.1 | None | ERR4828124 | MDR-TB | lineage2.2.1 | None | ERR4828118 | MDR-TB | lineage2.2.1 | None | ERR4828121 | MDR-TB | lineage2.2.1 | None | ERR4828082 | Pre-XDR-TB | lineage2.2.1 | None | ERR3132289 | RR-TB | lineage4.9 | None | ERR4830891 | MDR-TB | lineage2.2.1 | None | ERR4830018 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864936 | MDR-TB | lineage2.2.1 | None | ERR502927 | MDR-TB | lineage2.2.1 | None | ERR11044942 | MDR-TB | lineage2.2.1 | None | ERR1213837 | RR-TB | lineage4.9 | kr | ERR3256264 | MDR-TB | lineage1.2.1.2.1 | ph | ERR4276895 | MDR-TB | lineage2.2.1 | None | ERR4809229 | MDR-TB | lineage4.3.2.1 | za | ERR5864935 | MDR-TB | lineage2.2.1 | None | ERR4831636 | MDR-TB | lineage2.2.1 | vn | ERR4872241 | MDR-TB | lineage4.6.2.2 | None | SRR6832381 | MDR-TB | lineage2.2.1 | None | SRR6824390 | MDR-TB | lineage2.2.1 | cn | SRR1723660 | MDR-TB | lineage2.2.1 | cn | SRR6824674 | MDR-TB | lineage2.2.1 | cn | SRR8651564 | Pre-XDR-TB | lineage2.2.1 | cn | ERR067625 | MDR-TB | lineage2.2.1 | ru | ERR10680172 | RR-TB | lineage5.1.5 | None | ERR3256114 | MDR-TB | lineage1.2.1.2.1 | ph | ERR3273210 | RR-TB | lineage2.2.1 | None | ERR4553504 | MDR-TB | None | ERR4799628 | Pre-XDR-TB | lineage4.3.4.1 | in | ERR5864927 | MDR-TB | lineage2.2.1 | None | ERR5864937 | MDR-TB | lineage2.2.1 | None | ERR8773991 | MDR-TB | lineage2.2.1 | None | ERR5865574 | MDR-TB | lineage4.1.2.1 | None | ERR5865575 | MDR-TB | lineage4.1.2.1 | None | ERR5865935 | MDR-TB | lineage2.2.1 | None | SRR15315884 | MDR-TB | lineage2.2.1 | None | SRR14088369 | Pre-XDR-TB | lineage3 | None | SRR14802004 | MDR-TB | lineage2.2.1 | None | ERR9119633 | MDR-TB | lineage4.6.2.2 | None | SRR16588750 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969641 | MDR-TB | lineage2.2.1 | None | SRR20969476 | MDR-TB | lineage2.2.1 | None | SRR20969779 | MDR-TB | lineage2.2.1 | None | SRR20969660 | MDR-TB | lineage2.2.1 | None | SRR21001888 | Pre-XDR-TB | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR21276954 | Pre-XDR-TB | lineage2.2.1 | None | SRR21001886 | Pre-XDR-TB | lineage2.2.1 | None | SRR21001887 | Pre-XDR-TB | lineage2.2.1 | None | SRR21001889 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277121 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277846 | MDR-TB | lineage2.2.1 | None | SRR21277514 | MDR-TB | lineage2.2.1 | None | SRR21277825 | MDR-TB | lineage2.2.1.1 | None | SRR21576732 | MDR-TB | lineage2.2.1 | None | SRR22528578 | MDR-TB | lineage4.1.1 | None | SRR21747062 | Pre-XDR-TB | lineage2.2.1 | None | SRR22536484 | MDR-TB | lineage4.3.2 | None | ERR11069114 | MDR-TB | lineage2.2.1 | None | ERR9806816 | RR-TB | lineage4.3.4.2.1 | None | ERR10112900 | MDR-TB | lineage2.2.1.1 | None | SRR2024900 | MDR-TB | lineage2.2.1 | cn | ERR10610322 | RR-TB | lineage4.3.4.2.1 | None | SRR3085361 | Pre-XDR-TB | lineage2.2.1 | None | ERR10112878 | MDR-TB | lineage2.2.1.1 | None | SRR3082130 | Pre-XDR-TB | lineage2.2.1 | None | SRR3085287 | Pre-XDR-TB | lineage2.2.1 | None | SRR3085293 | MDR-TB | lineage2.2.1 | None | ERR230005 | MDR-TB | lineage2.2.1 | ru |
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