lineage | Count |
---|---|
lineage4.3.3 | 32 |
lineage4.1.1.3 | 1 |
lineage2.2.1 | 5 |
lineage4.3.4.1 | 6 |
lineage3 | 1 |
lineage3.1.2 | 1 |
lineage4.8 | 1 |
lineage4.1.1 | 1 |
lineage4.5 | 4 |
spoligotype | Count |
---|---|
None | 52 |
ID | Drug resistance | Lineage | Country iso2 | ERR2515948 | MDR-TB | lineage4.3.3 | za | SAMN01828249 | MDR-TB | lineage4.3.3 | za | SRR5338517 | MDR-TB | lineage4.1.1.3 | None | ERR2515293 | MDR-TB | lineage4.3.3 | za | ERR4822387 | Pre-XDR-TB | lineage2.2.1 | kg | ERR2653161 | MDR-TB | lineage4.3.4.1 | None | SRR9971276 | MDR-TB | lineage4.3.3 | None | SRR6046512 | MDR-TB | lineage3 | gb | ERR4831443 | Pre-XDR-TB | lineage3.1.2 | pk | ERR2653167 | MDR-TB | lineage4.8 | None | SRR6397568 | Other | lineage4.1.1 | None | SRR6856009 | MDR-TB | lineage4.3.3 | None | SRR832980 | MDR-TB | lineage4.3.3 | None | SRR8237316 | MDR-TB | lineage2.2.1 | np | SRR833060 | MDR-TB | lineage4.3.3 | None | SRR833062 | MDR-TB | lineage4.3.3 | None | SRR833186 | MDR-TB | lineage4.3.3 | None | SRR833123 | MDR-TB | lineage4.3.3 | None | ERR10748210 | MDR-TB | lineage4.3.3 | None | SRR8651581 | Pre-XDR-TB | lineage4.5 | None | SRR9971129 | MDR-TB | lineage4.3.3 | None | SRR8651578 | Pre-XDR-TB | lineage4.5 | cn | SRR9224914 | MDR-TB | lineage4.3.4.1 | None | ERR3838814 | MDR-TB | lineage4.3.4.1 | None | ERR10748215 | MDR-TB | lineage4.3.3 | None | ERR10748480 | MDR-TB | lineage4.3.3 | None | ERR10748246 | MDR-TB | lineage4.3.3 | None | ERR10748454 | MDR-TB | lineage4.3.3 | None | ERR10748489 | MDR-TB | lineage4.3.3 | None | ERR1193882 | MDR-TB | lineage4.3.3 | za | ERR3256255 | MDR-TB | lineage4.3.4.1 | ph | ERR4809225 | MDR-TB | lineage4.3.3 | za | ERR9992941 | MDR-TB | lineage4.3.3 | None | ERR7361961 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975412 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975763 | Pre-XDR-TB | lineage4.3.3 | None | ERR9125443 | MDR-TB | lineage4.3.4.1 | None | ERR7361957 | Pre-XDR-TB | lineage4.3.3 | None | ERR7737638 | MDR-TB | lineage4.3.3 | None | ERR7911213 | MDR-TB | lineage4.3.3 | za | ERR9992976 | MDR-TB | lineage4.3.3 | None | ERR9993018 | Pre-XDR-TB | lineage4.3.3 | None | SRR11342650 | MDR-TB | lineage4.3.3 | None | SRR11567799 | Pre-XDR-TB | lineage4.5 | None | SRR11567801 | Pre-XDR-TB | lineage4.5 | None | SRR12142349 | MDR-TB | lineage2.2.1 | None | SRR12142346 | MDR-TB | lineage2.2.1 | None | SRR22757400 | MDR-TB | lineage2.2.1 | None | SRR16058218 | MDR-TB | lineage4.3.4.1 | None | ERR11068366 | MDR-TB | lineage4.3.3 | None | ERR10610283 | MDR-TB | lineage4.3.3 | None | ERR9806653 | MDR-TB | lineage4.3.3 | None |
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