lineage | Count |
---|---|
lineage2.2.1 | 48 |
lineage2.2.2 | 9 |
lineage2.2.1.1 | 3 |
lineage4 | 1 |
lineage4.3.3 | 3 |
lineage4.1.2.1 | 1 |
lineage4.1.2 | 3 |
lineage4.3 | 1 |
La3;lineage2.2.2 | 1 |
lineage4.4.1.1 | 2 |
lineage4.3.1 | 1 |
lineage3 | 2 |
lineage4.1.1 | 1 |
lineage4.3.4.1 | 1 |
lineage4.2.2.1 | 1 |
spoligotype | Count |
---|---|
None | 78 |
ID | Drug resistance | Lineage | Country iso2 | ERR5864996 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040467 | MDR-TB | lineage2.2.1 | None | SRR15368955 | MDR-TB | lineage2.2.1 | None | ERR13243561 | Pre-XDR-TB | lineage2.2.2 | None | ERR5864988 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864994 | MDR-TB | lineage2.2.1 | None | ERR4808920 | MDR-TB | lineage2.2.1.1 | None | SRR16370536 | MDR-TB | lineage2.2.1 | None | ERR5864990 | MDR-TB | lineage2.2.1 | None | ERR4829761 | Pre-XDR-TB | lineage4 | None | ERR11082467 | RR-TB | lineage4.3.3 | None | SAMEA2534907 | MDR-TB | lineage2.2.1 | uz | ERR2515937 | MDR-TB | lineage4.1.2.1 | za | ERR5866493 | XDR-TB | lineage2.2.1 | None | ERR1633920 | RR-TB | lineage4.1.2 | za | SRR10040171 | Pre-XDR-TB | lineage2.2.1 | None | ERR234124 | MDR-TB | lineage2.2.1 | cn | ERR4796263 | Pre-XDR-TB | lineage2.2.1 | in | SRR10040315 | MDR-TB | lineage2.2.1 | None | ERR11243579 | MDR-TB | lineage2.2.1 | None | ERR279618 | RR-TB | lineage4.1.2 | None | ERR4797936 | MDR-TB | lineage4.3 | in | ERR13245558 | MDR-TB | La3;lineage2.2.2 | None | ERR9030351 | MDR-TB | lineage4.4.1.1 | None | ERR13243551 | MDR-TB | lineage2.2.2 | None | SRR24710079 | MDR-TB | lineage2.2.1 | None | ERR5864991 | MDR-TB | lineage2.2.1 | None | ERR13289291 | MDR-TB | lineage2.2.1 | None | ERR7911274 | MDR-TB | lineage2.2.1.1 | vn | ERR4830734 | MDR-TB | lineage4.3.1 | dz | SRR15316588 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797423 | MDR-TB | lineage3 | in | SRR5152896 | MDR-TB | lineage2.2.1 | None | SRR25515401 | MDR-TB | lineage2.2.2 | None | SRR21277250 | MDR-TB | lineage2.2.1 | None | SRR8847013 | Pre-XDR-TB | lineage2.2.1 | None | SRR21276915 | MDR-TB | lineage2.2.1 | None | ERR13284535 | RR-TB | lineage4.3.3 | None | SRR28393938 | MDR-TB | lineage4.1.1 | None | SRR24256126 | MDR-TB | lineage2.2.1 | None | ERR552790 | MDR-TB | lineage2.2.1 | None | ERR5864992 | MDR-TB | lineage2.2.1 | None | ERR495149 | RR-TB | lineage4.1.2 | None | SRR25515185 | MDR-TB | lineage2.2.2 | None | ERR5864989 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811355 | Pre-XDR-TB | lineage2.2.1 | cn | SRR29093376 | MDR-TB | lineage2.2.2 | None | SRR18715363 | MDR-TB | lineage2.2.1 | None | ERR9030483 | MDR-TB | lineage4.4.1.1 | None | ERR13243563 | MDR-TB | lineage2.2.2 | None | SRR15316499 | MDR-TB | lineage2.2.1 | None | SRR10315589 | MDR-TB | lineage4.3.3 | None | SRR10040466 | MDR-TB | lineage2.2.1 | None | ERR11773781 | MDR-TB | lineage2.2.1 | None | SRR29093908 | MDR-TB | lineage2.2.2 | None | ERR13265538 | MDR-TB | lineage2.2.1 | None | ERR2653204 | MDR-TB | lineage4.3.4.1 | None | SRR21887643 | MDR-TB | lineage2.2.2 | None | ERR7911471 | MDR-TB | lineage2.2.1 | vn | ERR7911335 | MDR-TB | lineage2.2.1 | us | SRR21277262 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516018 | MDR-TB | lineage2.2.1.1 | za | SRR28045230 | MDR-TB | lineage2.2.1 | None | SRR25207331 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | SRR21277574 | Pre-XDR-TB | lineage2.2.1 | None | SRR15723176 | MDR-TB | lineage2.2.1 | None | SRR21887697 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830939 | Pre-XDR-TB | lineage2.2.1 | np | ERR5864995 | MDR-TB | lineage2.2.1 | None | ERR552790_ERR552791 | MDR-TB | lineage2.2.1 | None | SRR25207058 | MDR-TB | lineage2.2.1 | None | ERR13243368 | MDR-TB | lineage2.2.2 | None | SRR5153234 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799412 | Pre-XDR-TB | lineage3 | in | ERR4799460 | Pre-XDR-TB | lineage2.2.1 | in | ERR5864997 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864993 | MDR-TB | lineage2.2.1 | None |
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