lineage | Count |
---|---|
lineage2.2.1 | 57 |
lineage2.2 | 3 |
lineage4.3.4.2.1 | 4 |
1 | |
lineage3 | 2 |
lineage2.2.1.1 | 1 |
lineage2.1 | 1 |
lineage4.5 | 1 |
lineage1.1.2 | 1 |
lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 72 |
ID | Drug resistance | Lineage | Country iso2 | ERR2510686 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510702 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510690 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510703 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510723 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510710 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510709 | Pre-XDR-TB | lineage2.2.1 | it | SRR23310995 | Pre-XDR-TB | lineage2.2 | None | ERR8665867 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653094 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR2653109 | Pre-XDR-TB | lineage4.3.4.2.1 | None | SRR23310992 | Pre-XDR-TB | lineage2.2 | None | ERR7911726 | Pre-XDR-TB | lineage2.2.1 | us | ERR7911410 | MDR-TB | lineage2.2.1 | us | ERR2652991 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR2653072 | Pre-XDR-TB | lineage4.3.4.2.1 | None | SRR3085308 | MDR-TB | None | SRR23691350 | MDR-TB | lineage2.2.1 | None | ERR5866280 | MDR-TB | lineage2.2.1 | None | SRR23311054 | Pre-XDR-TB | lineage2.2 | None | SRR11033737 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872338 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831447 | Pre-XDR-TB | lineage3 | None | ERR4872314 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865732 | Pre-XDR-TB | lineage2.2.1 | None | SRR15276983 | Pre-XDR-TB | lineage3 | None | SRR6458389 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824389 | Pre-XDR-TB | lineage2.2.1.1 | cn | ERR4872355 | MDR-TB | lineage2.2.1 | None | ERR11049814 | MDR-TB | lineage2.2.1 | None | ERR5865905 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715190 | MDR-TB | lineage2.2.1 | None | SRR18714857 | MDR-TB | lineage2.2.1 | None | ERR3273195 | MDR-TB | lineage2.1 | None | ERR067584 | Pre-XDR-TB | lineage2.2.1 | ru | ERR11049098 | Pre-XDR-TB | lineage2.2.1 | None | ERR108453 | Pre-XDR-TB | lineage2.2.1 | ru | ERR3639776 | Pre-XDR-TB | lineage2.2.1 | None | ERR11049418 | MDR-TB | lineage2.2.1 | None | ERR4796395 | MDR-TB | lineage2.2.1 | in | ERR4797261 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864719 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811155 | Pre-XDR-TB | lineage4.5 | cn | ERR5863886 | MDR-TB | lineage2.2.1 | None | ERR5863885 | MDR-TB | lineage2.2.1 | None | ERR5863893 | MDR-TB | lineage2.2.1 | None | ERR5863889 | MDR-TB | lineage2.2.1 | None | ERR5863898 | MDR-TB | lineage2.2.1 | None | ERR5863896 | MDR-TB | lineage2.2.1 | None | ERR5863899 | MDR-TB | lineage2.2.1 | None | ERR5863897 | MDR-TB | lineage2.2.1 | None | ERR5864717 | MDR-TB | lineage2.2.1 | None | ERR5864724 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863887 | MDR-TB | lineage2.2.1 | None | ERR5863884 | MDR-TB | lineage2.2.1 | None | ERR5863888 | MDR-TB | lineage2.2.1 | None | ERR5863892 | MDR-TB | lineage2.2.1 | None | ERR5863894 | MDR-TB | lineage2.2.1 | None | ERR5863895 | MDR-TB | lineage2.2.1 | None | ERR5863890 | MDR-TB | lineage2.2.1 | None | ERR5863901 | MDR-TB | lineage2.2.1 | None | ERR5863891 | MDR-TB | lineage2.2.1 | None | ERR5863900 | MDR-TB | lineage2.2.1 | None | ERR5864720 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864716 | MDR-TB | lineage2.2.1 | None | ERR5864723 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864722 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864721 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911384 | MDR-TB | lineage2.2.1 | us | ERR5864718 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818699 | MDR-TB | lineage1.1.2 | dj | ERR4813606 | RR-TB | lineage4.1.2.1 | None |
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