lineage | Count |
---|---|
lineage3 | 5 |
lineage2.2.1 | 37 |
lineage4.2.1 | 20 |
lineage4.3.4.1 | 2 |
lineage2.2.1.1 | 1 |
lineage2.1 | 1 |
lineage4.3.3 | 2 |
lineage4.2.1;lineage4.3.3 | 1 |
lineage4.3.4.2 | 1 |
lineage2.2.1;lineage4.2.1 | 1 |
lineage4.2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 72 |
ID | Drug resistance | Lineage | Country iso2 | SRR28044936 | XDR-TB | lineage3 | None | SRR8651620 | RR-TB | lineage2.2.1 | cn | ERR7911638 | Pre-XDR-TB | lineage2.2.1 | za | SRR10869248 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351421 | MDR-TB | lineage4.2.1 | None | SRR14801357 | MDR-TB | lineage4.2.1 | None | ERR1873543 | Pre-XDR-TB | lineage2.2.1 | za | ERR1873501 | Pre-XDR-TB | lineage2.2.1 | za | SRR14782346 | MDR-TB | lineage4.2.1 | None | ERR8025464 | Pre-XDR-TB | lineage2.2.1 | None | SRR14807644 | MDR-TB | lineage4.2.1 | None | ERR8025677 | Pre-XDR-TB | lineage2.2.1 | None | ERR9907710 | MDR-TB | lineage4.3.4.1 | None | SRR14801599 | MDR-TB | lineage4.2.1 | None | ERR7911685 | Pre-XDR-TB | lineage2.2.1 | za | SRR26936995 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR8025743 | Pre-XDR-TB | lineage2.2.1 | None | ERR9125448 | MDR-TB | lineage3 | None | SRR1723646 | MDR-TB | lineage2.2.1 | None | SRR14802075 | MDR-TB | lineage4.2.1 | None | ERR8025748 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824468 | MDR-TB | lineage2.2.1 | cn | SRR10869261 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866093 | MDR-TB | lineage2.2.1 | None | ERR8025503 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748085 | Pre-XDR-TB | lineage2.2.1 | None | ERR1873403 | Pre-XDR-TB | lineage2.2.1 | None | ERR13289052 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801601 | MDR-TB | lineage4.2.1 | None | SRR14807558 | MDR-TB | lineage4.2.1 | None | ERR13285202 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866094 | MDR-TB | lineage2.2.1 | None | SAMN03246387 | MDR-TB | lineage2.2.1 | None | SRR10305614 | MDR-TB | lineage2.2.1 | None | SRR11662498 | Pre-XDR-TB | lineage2.1 | None | ERR9907776 | MDR-TB | lineage4.3.4.1 | None | ERR7911635 | Pre-XDR-TB | lineage2.2.1 | za | ERR11798651 | MDR-TB | lineage4.2.1 | None | SRR1723645 | MDR-TB | lineage2.2.1 | cn | SRR14802012 | MDR-TB | lineage4.2.1 | None | ERR8025514 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025672 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310985 | HR-TB | lineage4.2.1 | None | ERR8975715 | Pre-XDR-TB | lineage2.2.1 | None | ERR11080883 | MDR-TB | lineage4.3.3 | None | SRR14807630 | Pre-XDR-TB | lineage4.2.1 | None | SRR28044922 | XDR-TB | lineage3 | None | SRR28045554 | Pre-XDR-TB | lineage4.3.3 | None | SRR28498554 | MDR-TB | lineage4.2.1 | None | SRR6824578 | MDR-TB | lineage2.2.1 | cn | SRR14802041 | Pre-XDR-TB | lineage4.2.1;lineage4.3.3 | None | SRR14801991 | MDR-TB | lineage4.2.1 | None | ERR4553958 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR14801981 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR28044932 | XDR-TB | lineage3 | None | SRR14782793 | MDR-TB | lineage4.2.1 | None | SRR14782794 | MDR-TB | lineage4.2.1 | None | ERR8025702 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911594 | Pre-XDR-TB | lineage2.2.1 | za | ERR4011952 | MDR-TB | lineage4.2.2.2 | None | SRR14801614 | MDR-TB | lineage4.2.1 | None | SRR14807475 | MDR-TB | lineage4.2.1 | None | ERR1034642 | Pre-XDR-TB | lineage2.2.1 | None | ERR1873390 | Pre-XDR-TB | lineage2.2.1 | None | ERR1873431 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310897 | Pre-XDR-TB | lineage4.2.1 | None | ERR9806991 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723647 | MDR-TB | lineage2.2.1 | None | ERR1873404 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801615 | MDR-TB | lineage4.2.1 | None | ERR9807020 | Pre-XDR-TB | lineage2.2.1 | None | SRR16058212 | MDR-TB | lineage3 | None |
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