Rv0668 - p.Glu518Asp
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
0 HR-TB
61 MDR-TB
32 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 5 |
| lineage4.6.1.2 | 26 |
| lineage2.2.1.1 | 3 |
| lineage4.2.1 | 3 |
| lineage2.2.1 | 42 |
| lineage1.1.3.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.5 | 2 |
| lineage4.2.1.1 | 4 |
| lineage3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1.2.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 94 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3287527 | MDR-TB | lineage4 | None | ERR2707132 | MDR-TB | lineage4.6.1.2 | cd | ERR2706919 | MDR-TB | lineage4.6.1.2 | cd | ERR8976111 | RR-TB | lineage2.2.1.1 | None | SRR23311021 | MDR-TB | lineage4.2.1 | None | SAMN02419556 | Pre-XDR-TB | lineage2.2.1 | by | SRR28239709 | MDR-TB | lineage2.2.1 | None | ERR3639797 | MDR-TB | lineage2.2.1 | None | ERR6358882 | MDR-TB | lineage4.6.1.2 | None | ERR6358794 | MDR-TB | lineage4.6.1.2 | None | SRR6832811 | MDR-TB | lineage2.2.1 | None | ERR1654669 | MDR-TB | lineage4.6.1.2 | None | ERR6358754 | MDR-TB | lineage4.6.1.2 | None | SRR18714816 | MDR-TB | lineage2.2.1 | None | ERR5866291 | MDR-TB | lineage2.2.1 | None | ERR4457924 | MDR-TB | lineage4 | None | SRR29681375 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266541 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284125 | MDR-TB | lineage2.2.1 | None | SRR29539822 | MDR-TB | lineage2.2.1 | None | SRR29681402 | MDR-TB | lineage2.2.1 | None | SRR18714957 | MDR-TB | lineage2.2.1 | None | ERR6358809 | MDR-TB | lineage4.6.1.2 | None | SRR24256066 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256037 | MDR-TB | lineage2.2.1 | None | ERR11043920 | MDR-TB | lineage1.1.3.2 | None | SRR29231795 | MDR-TB | lineage4.6.1.2 | None | ERR1654664 | MDR-TB | lineage4.6.1.2 | None | SRR1159053 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723452 | MDR-TB | lineage2.2.1 | None | ERR11773799 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911285 | MDR-TB | lineage1.1.1.1 | vn | SRR1159154 | Pre-XDR-TB | lineage2.2.1 | None | SRR17234892 | MDR-TB | lineage4 | None | ERR2515573 | Pre-XDR-TB | lineage4.4.1.1 | za | SRR24256075 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153835 | Pre-XDR-TB | lineage4.2.1 | None | ERR5866290 | MDR-TB | lineage2.2.1 | None | SRR1181072 | Pre-XDR-TB | lineage2.2.1 | None | SRR5067693 | Pre-XDR-TB | lineage2.2.1 | vn | ERR1654693 | MDR-TB | lineage4.6.1.2 | None | SRR6832521 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163446 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR5866292 | MDR-TB | lineage2.2.1 | None | SRR29230780 | MDR-TB | lineage4.6.1.2 | None | SRR3743391 | Pre-XDR-TB | lineage4.2.1 | None | SRR25207192 | MDR-TB | lineage4.5 | None | SRR29231826 | MDR-TB | lineage4.6.1.2 | None | SRR11662708 | MDR-TB | lineage2.2.1.1 | None | ERR4828777 | MDR-TB | lineage4.2.1.1 | None | SRR7517825 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539334 | Pre-XDR-TB | lineage2.2.1 | None | ERR7339051 | MDR-TB | lineage4 | None | SRR1181097 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256367 | Pre-XDR-TB | lineage2.2.1 | None | SRR7765355 | MDR-TB | lineage4.2.1.1 | None | ERR1034737 | MDR-TB | lineage4 | pe | SRR29230786 | MDR-TB | lineage4.6.1.2 | None | ERR6358915 | MDR-TB | lineage4.6.1.2 | None | SRR29539701 | Pre-XDR-TB | lineage2.2.1 | None | SRR10828631 | MDR-TB | lineage2.2.1.1 | None | ERR4799803 | MDR-TB | lineage3 | in | ERR3014592 | Pre-XDR-TB | lineage4.6.1.2 | None | SRR7517696 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831840 | Pre-XDR-TB | lineage2.2.1 | vn | ERR2707070 | MDR-TB | lineage4.6.1.2 | cd | ERR2707020 | MDR-TB | lineage4.6.1.2 | cd | ERR2707026 | MDR-TB | lineage4.6.1.2 | cd | ERR2707012 | MDR-TB | lineage4.6.1.2 | cd | ERR2707024 | MDR-TB | lineage4.6.1.2 | cd | ERR4831854 | Pre-XDR-TB | lineage2.2.1 | vn | ERR4830970 | Pre-XDR-TB | lineage4.2.2.2 | np | ERR1199105 | MDR-TB | lineage4.6.1.2 | cd | ERR1199113 | MDR-TB | lineage4.6.1.2 | cd | ERR11798649 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR3085317 | MDR-TB | lineage4.2.1.1 | None | SRR30180422 | MDR-TB | lineage4.5 | None | SRR24255960 | MDR-TB | lineage2.2.1 | None | ERR6358881 | MDR-TB | lineage4.6.1.2 | None | ERR7362024 | Pre-XDR-TB | lineage2.2.1 | None | SAMN03246216 | MDR-TB | lineage2.2.1 | cn | SRR29231001 | MDR-TB | lineage4.6.1.2 | None | SRR18714831 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539150 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255877 | MDR-TB | lineage2.2.1 | None | ERR2652916 | MDR-TB | lineage4.1.1 | None | SRR29231685 | MDR-TB | lineage4.6.1.2 | None | SRR29539087 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231679 | MDR-TB | lineage4.6.1.2 | None | ERR2510610 | Pre-XDR-TB | lineage4.1.1.3 | pk | ERR6336699 | MDR-TB | lineage1.2.1.2.1 | None | SRR6832764 | MDR-TB | lineage2.2.1 | None | ERR11043519 | MDR-TB | lineage2.2.1 | None | SRR13180339 | Pre-XDR-TB | lineage2.2.1 | None |
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