lineage | Count |
---|---|
lineage2.2.1 | 24 |
lineage4.6.1.2 | 16 |
lineage4.2.1.1 | 3 |
lineage4 | 4 |
lineage1.1.3.2 | 1 |
lineage3 | 1 |
lineage1.2.1.2.1 | 1 |
lineage2.2.1.1 | 1 |
lineage1.1.1.1 | 1 |
lineage4.1.2.1;lineage2.2.1 | 1 |
lineage4.2.1 | 3 |
lineage4.1.1.3 | 1 |
lineage4.1.1 | 1 |
lineage4.4.1.1 | 1 |
lineage4.3.2.1 | 1 |
lineage4.2.2.2 | 1 |
lineage2.2 | 1 |
spoligotype | Count |
---|---|
None | 62 |
ID | Drug resistance | Lineage | Country iso2 | SRR6832764 | MDR-TB | lineage2.2.1 | None | SRR6832811 | MDR-TB | lineage2.2.1 | None | ERR3014592 | Pre-XDR-TB | lineage4.6.1.2 | None | SRR7517825 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831854 | Pre-XDR-TB | lineage2.2.1 | vn | SRR7517696 | Pre-XDR-TB | lineage2.2.1 | None | SRR7765355 | MDR-TB | lineage4.2.1.1 | None | ERR11043519 | MDR-TB | lineage2.2.1 | None | ERR1034737 | MDR-TB | lineage4 | pe | ERR1199113 | MDR-TB | lineage4.6.1.2 | cd | ERR1199105 | MDR-TB | lineage4.6.1.2 | cd | ERR11043920 | MDR-TB | lineage1.1.3.2 | None | ERR3639797 | MDR-TB | lineage2.2.1 | None | ERR3287527 | MDR-TB | lineage4 | None | ERR4799803 | MDR-TB | lineage3 | in | ERR5866291 | MDR-TB | lineage2.2.1 | None | ERR5866290 | MDR-TB | lineage2.2.1 | None | ERR6358794 | MDR-TB | lineage4.6.1.2 | None | ERR6336699 | MDR-TB | lineage1.2.1.2.1 | None | ERR6358754 | MDR-TB | lineage4.6.1.2 | None | ERR5866292 | MDR-TB | lineage2.2.1 | None | ERR6358882 | MDR-TB | lineage4.6.1.2 | None | ERR6358809 | MDR-TB | lineage4.6.1.2 | None | ERR6358881 | MDR-TB | lineage4.6.1.2 | None | ERR7339051 | MDR-TB | lineage4 | None | ERR6358915 | MDR-TB | lineage4.6.1.2 | None | SRR1159053 | Pre-XDR-TB | lineage2.2.1 | None | ERR7362024 | Pre-XDR-TB | lineage2.2.1 | None | ERR8976111 | RR-TB | lineage2.2.1.1 | None | ERR7911285 | MDR-TB | lineage1.1.1.1 | vn | SRR1163446 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | SRR1159154 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181097 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181072 | Pre-XDR-TB | lineage2.2.1 | None | SRR13180339 | Pre-XDR-TB | lineage2.2.1 | None | SRR17234892 | MDR-TB | lineage4 | None | SRR3743391 | Pre-XDR-TB | lineage4.2.1 | None | SRR18714831 | Pre-XDR-TB | lineage2.2.1 | None | SAMN03246216 | MDR-TB | lineage2.2.1 | cn | SRR18714816 | MDR-TB | lineage2.2.1 | None | SRR18714957 | MDR-TB | lineage2.2.1 | None | SRR3085317 | MDR-TB | lineage4.2.1.1 | None | SRR5067693 | Pre-XDR-TB | lineage2.2.1 | vn | ERR2510610 | Pre-XDR-TB | lineage4.1.1.3 | pk | ERR2652916 | MDR-TB | lineage4.1.1 | None | SRR5153835 | Pre-XDR-TB | lineage4.2.1 | None | ERR2515573 | Pre-XDR-TB | lineage4.4.1.1 | za | ERR2515907 | RR-TB | lineage4.3.2.1 | za | SAMN02419556 | Pre-XDR-TB | lineage2.2.1 | by | ERR4828777 | MDR-TB | lineage4.2.1.1 | None | SRR23311021 | MDR-TB | lineage4.2.1 | None | ERR2707026 | MDR-TB | lineage4.6.1.2 | cd | ERR2707024 | MDR-TB | lineage4.6.1.2 | cd | ERR2707012 | MDR-TB | lineage4.6.1.2 | cd | ERR2707070 | MDR-TB | lineage4.6.1.2 | cd | ERR2707132 | MDR-TB | lineage4.6.1.2 | cd | ERR2706919 | MDR-TB | lineage4.6.1.2 | cd | ERR2707020 | MDR-TB | lineage4.6.1.2 | cd | ERR4830970 | Pre-XDR-TB | lineage4.2.2.2 | np | ERR4831840 | Pre-XDR-TB | lineage2.2.1 | vn | SRR6831861 | MDR-TB | lineage2.2 | None | SRR6832521 | Pre-XDR-TB | lineage2.2.1 | None |
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