lineage | Count |
---|---|
lineage4.1.2.1 | 5 |
lineage2.2.1 | 22 |
1 | |
lineage2.2.1.1 | 3 |
lineage4.3.3 | 18 |
lineage4.1.2.1.1 | 1 |
lineage4.9 | 1 |
lineage2.1 | 5 |
lineage3 | 1 |
lineage4.8 | 1 |
lineage4.2.2.2 | 3 |
lineage4 | 1 |
lineage4.4.1.1 | 1 |
spoligotype | Count |
---|---|
None | 63 |
ID | Drug resistance | Lineage | Country iso2 | ERR1034681 | MDR-TB | lineage4.1.2.1 | co | ERR10748361 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748090 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748123 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748083 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748191 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553994 | MDR-TB | None | ERR10748493 | Pre-XDR-TB | lineage2.2.1 | None | ERR4195285 | MDR-TB | lineage4.1.2.1 | None | ERR6362010 | MDR-TB | lineage2.2.1.1 | None | ERR5987457 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987427 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911198 | MDR-TB | lineage4.3.3 | za | ERR760848 | MDR-TB | lineage4.1.2.1.1 | ar | ERR7911444 | MDR-TB | lineage4.3.3 | za | ERR9120024 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911612 | Pre-XDR-TB | lineage2.2.1 | za | ERR9119793 | MDR-TB | lineage2.2.1.1 | None | ERR9120025 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180403 | Pre-XDR-TB | lineage4.3.3 | None | ERR9120119 | Pre-XDR-TB | lineage2.2.1 | None | SRR1047986 | Sensitive | lineage4.9 | None | SRR11342641 | MDR-TB | lineage4.3.3 | None | SRR1144787 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180328 | Pre-XDR-TB | lineage4.3.3 | None | SRR10726045 | MDR-TB | lineage4.3.3 | None | SRR11342667 | MDR-TB | lineage4.3.3 | None | SRR11349133 | MDR-TB | lineage4.3.3 | None | SRR1181260 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181321 | Pre-XDR-TB | lineage4.3.3 | None | SRR21576537 | MDR-TB | lineage2.1 | None | SRR20969769 | RR-TB | lineage2.2.1 | None | SRR20970062 | MDR-TB | lineage2.2.1 | None | SRR13180268 | MDR-TB | lineage3 | None | SRR13423593 | Pre-XDR-TB | lineage2.2.1 | None | SRR15600357 | MDR-TB | lineage2.2.1.1 | None | SRR21746995 | MDR-TB | lineage2.1 | None | ERR11138655 | Pre-XDR-TB | lineage4.8 | None | SRR21747020 | MDR-TB | lineage2.1 | None | SRR21747054 | Pre-XDR-TB | lineage2.1 | None | SRR21747057 | MDR-TB | lineage2.1 | None | ERR2516455 | Pre-XDR-TB | lineage4.3.3 | pe | SAMN02053741 | MDR-TB | lineage4.3.3 | za | SAMN02585960 | Pre-XDR-TB | lineage4.3.3 | za | ERR2446468 | MDR-TB | lineage4.2.2.2 | nl | ERR1873555 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02398700 | Pre-XDR-TB | lineage2.2.1 | kr | ERR2228810 | RR-TB | lineage4 | None | ERR4828992 | MDR-TB | lineage4.4.1.1 | None | ERR2516570 | Pre-XDR-TB | lineage4.3.3 | pe | ERR3275385 | MDR-TB | lineage4.2.2.2 | nl | ERR2516619 | Pre-XDR-TB | lineage4.3.3 | pe | ERR2516014 | Pre-XDR-TB | lineage2.2.1 | za | ERR2517379 | MDR-TB | lineage4.2.2.2 | nl | SRR6256999 | MDR-TB | lineage4.1.2.1 | None | SRR833067 | MDR-TB | lineage4.3.3 | None | SRR6832352 | MDR-TB | lineage2.2.1 | None | SRR9971280 | MDR-TB | lineage4.3.3 | None | ERR3148042 | MDR-TB | lineage4.1.2.1 | None | ERR4831563 | Pre-XDR-TB | lineage2.2.1 | None | SRR6930888 | RR-TB | lineage2.2.1 | None | SRR833149 | MDR-TB | lineage4.3.3 | None | SRR9738549 | Pre-XDR-TB | lineage4.1.2.1 | None |
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