Rv0668 - p.His525Gln
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
20 RR-TB
0 HR-TB
145 MDR-TB
29 Pre-XDR-TB
3 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.1.2.1 | 1 |
| lineage2.2.1 | 93 |
| lineage3 | 18 |
| lineage4.3.1 | 1 |
| lineage4 | 12 |
| lineage3.1.1;lineage4 | 1 |
| lineage4.4.1.1.1 | 28 |
| lineage4.1.1.3 | 4 |
| lineage2.2.2 | 7 |
| lineage4.3.3 | 7 |
| lineage4.1.2 | 3 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.2.1 | 6 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.7 | 3 |
| lineage1.1.2 | 1 |
| lineage3.1.1 | 4 |
| lineage2.2.1.1 | 2 |
| lineage3.1.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 197 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR13260077 | MDR-TB | lineage1.2.1.2.1 | None | SRR10305699 | MDR-TB | lineage2.2.1 | None | SRR6832456 | MDR-TB | lineage2.2.1 | None | ERR11043185 | MDR-TB | lineage2.2.1 | None | SRR7070080 | Pre-XDR-TB | lineage3 | None | ERR4383962 | MDR-TB | lineage4.3.1 | None | ERR11067434 | MDR-TB | lineage4 | None | ERR11043337 | MDR-TB | lineage4 | None | ERR10762252 | MDR-TB | lineage2.2.1 | None | ERR10762470 | MDR-TB | lineage2.2.1 | None | ERR13283981 | MDR-TB | lineage4 | None | SRR10040192 | MDR-TB | lineage2.2.1 | None | ERR9030453 | RR-TB | lineage3.1.1;lineage4 | None | ERR13285827 | MDR-TB | lineage2.2.1 | None | ERR4830495 | MDR-TB | lineage4.4.1.1.1 | None | SRR29094371 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10762409 | MDR-TB | lineage2.2.1 | None | ERR7737723 | MDR-TB | lineage4.4.1.1.1 | None | SRR29681222 | MDR-TB | lineage2.2.1 | None | ERR10762454 | MDR-TB | lineage2.2.1 | None | SRR29385358 | Pre-XDR-TB | lineage2.2.2 | None | ERR13285738 | MDR-TB | lineage2.2.1 | None | SRR10315715 | MDR-TB | lineage4.4.1.1.1 | None | ERR3639701 | MDR-TB | lineage4 | None | SRR9971312 | MDR-TB | lineage4.4.1.1.1 | None | ERR10762250 | MDR-TB | lineage2.2.1 | None | ERR13285776 | MDR-TB | lineage2.2.1 | None | SRR22528531 | MDR-TB | lineage4.3.3 | None | ERR13261489 | Pre-XDR-TB | lineage4.3.3 | None | ERR7737804 | MDR-TB | lineage4.4.1.1.1 | None | ERR970453 | RR-TB | lineage4.1.2 | None | SRR29539766 | MDR-TB | lineage2.2.1 | None | ERR4813567 | RR-TB | lineage2.2.1 | None | SRR29289332 | Pre-XDR-TB | lineage3 | None | ERR13267597 | MDR-TB | lineage4 | None | ERR13260544 | RR-TB | lineage2.2.1 | None | ERR4829941 | MDR-TB | lineage3 | pk | SRR14088365 | XDR-TB | lineage3 | None | ERR13285737 | MDR-TB | lineage2.2.1 | None | SRR29289144 | XDR-TB | lineage3 | None | SRR29055922 | MDR-TB | lineage4.3.4.2.1 | None | SRR29289145 | XDR-TB | lineage3 | None | SRR1019141 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR4829891 | RR-TB | lineage2.2.1 | it | SRR1166189 | Pre-XDR-TB | lineage4.1.2.1 | ro | ERR4812770 | RR-TB | lineage2.2.1 | pe | SRR28045931 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR553220 | MDR-TB | lineage4 | None | ERR2516605 | MDR-TB | lineage4.1.1.3 | pe | SRR21747017 | MDR-TB | lineage2.2.1;lineage4.5 | None | SRR9971003 | MDR-TB | lineage4.4.1.1.1 | None | ERR10762290 | MDR-TB | lineage2.2.1 | None | SRR10397129 | MDR-TB | lineage2.2.1 | None | ERR13284756 | MDR-TB | lineage2.2.1 | None | ERR5865264 | Pre-XDR-TB | lineage2.2.1 | None | ERR970455 | RR-TB | lineage4.1.2 | None | SRR5125075 | MDR-TB | lineage3 | None | ERR2653089 | MDR-TB | lineage4.7 | None | SRR3743474 | MDR-TB | lineage2.2.1 | None | ERR4813555 | RR-TB | lineage2.2.1 | None | SRR10315713 | MDR-TB | lineage4.4.1.1.1 | None | ERR11082203 | MDR-TB | lineage4.3.3 | None | ERR5865834 | MDR-TB | lineage2.2.1 | None | SRR10380176 | MDR-TB | lineage2.2.1 | None | ERR4827756 | MDR-TB | lineage2.2.1 | None | ERR5865599 | MDR-TB | lineage2.2.1 | None | SRR29385415 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653091 | MDR-TB | lineage4.7 | None | SRR5153883 | MDR-TB | lineage2.2.1 | None | SRR28741124 | MDR-TB | lineage2.2.1 | None | SRR14801780 | MDR-TB | lineage2.2.1 | None | SRR20969629 | Pre-XDR-TB | lineage2.2.1 | None | ERR970454 | RR-TB | lineage4.1.2 | None | ERR11798557 | MDR-TB | lineage2.2.1 | None | SRR10379914 | MDR-TB | lineage2.2.1 | None | ERR13284838 | MDR-TB | lineage2.2.1 | None | ERR13260412 | RR-TB | lineage2.2.1 | None | ERR9992613 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR5865598 | MDR-TB | lineage2.2.1 | None | SRR29772538 | MDR-TB | lineage1.1.2 | None | ERR5865265 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260175 | RR-TB | lineage2.2.1 | None | ERR3794388 | MDR-TB | lineage2.2.1 | None | SRR11342645 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349174 | MDR-TB | lineage4.4.1.1.1 | None | ERR13285902 | MDR-TB | lineage2.2.1 | None | SRR28741130 | MDR-TB | lineage2.2.1 | None | SRR28741127 | MDR-TB | lineage2.2.1 | None | ERR5865266 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260642 | RR-TB | lineage2.2.1 | None | SAMN02350479 | Pre-XDR-TB | lineage4.4.1.1.1 | za | ERR13258384 | Pre-XDR-TB | lineage2.2.2 | None | SRR21887706 | Pre-XDR-TB | lineage2.2.2 | None | ERR13288981 | MDR-TB | lineage4.4.1.1.1 | None | SRR29081570 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR25534252 | MDR-TB | lineage2.2.1 | None | ERR5865833 | MDR-TB | lineage2.2.1 | None | SRR28741133 | MDR-TB | lineage2.2.1 | None | DRR130104 | Pre-XDR-TB | lineage2.2.2 | None | ERR13284095 | MDR-TB | lineage4.3.3 | None | ERR13260145 | RR-TB | lineage2.2.1 | None | SRR29273738 | MDR-TB | lineage4.1.2.1 | None | ERR2864285 | MDR-TB | lineage4.1.1.3 | pt | SRR15014672 | MDR-TB | lineage3 | None | SRR3085342 | MDR-TB | lineage3.1.1 | None | SRR1140936 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR28351264 | MDR-TB | lineage3 | None | ERR7911271 | MDR-TB | lineage2.2.1 | md | ERR5865664 | MDR-TB | lineage2.2.1 | None | ERR7911136 | MDR-TB | lineage2.2.1 | vn | ERR4831847 | MDR-TB | lineage2.2.1 | vn | ERR4831809 | MDR-TB | lineage2.2.1 | vn | SRR2024913 | MDR-TB | lineage2.2.1 | cn | ERR4812663 | RR-TB | lineage2.2.1 | None | ERR7911201 | MDR-TB | lineage4.4.1.1.1 | za | ERR7911202 | MDR-TB | lineage4.4.1.1.1 | za | ERR7911040 | MDR-TB | lineage2.2.1 | md | ERR4829877 | RR-TB | lineage2.2.1 | it | ERR751454 | RR-TB | lineage2.2.1 | pe | SRR24710119 | MDR-TB | lineage2.2.1 | None | ERR2653095 | MDR-TB | lineage4.7 | None | ERR067576 | MDR-TB | lineage2.2.1 | ru | ERR228029 | MDR-TB | lineage2.2.1 | ru | ERR4819736 | Pre-XDR-TB | lineage3 | gb | ERR2513160 | Pre-XDR-TB | lineage3 | gb | SRR22528520 | MDR-TB | lineage4.3.3 | None | SRR22528574 | MDR-TB | lineage4.3.3 | None | SRR26937014 | MDR-TB | lineage2.2.1.1 | None | SRR5818620 | MDR-TB | lineage3.1.1 | dj | ERR13272907 | MDR-TB | lineage4 | None | SRR29385421 | Pre-XDR-TB | lineage2.2.2 | None | SRR29539771 | MDR-TB | lineage2.2.1 | None | SRR15316369 | MDR-TB | lineage2.2.1 | None | ERR5866529 | MDR-TB | lineage2.2.1 | None | ERR4872105 | MDR-TB | lineage4.1.2.1 | None | ERR4830478 | MDR-TB | lineage4.4.1.1.1 | None | ERR3287438 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR7755711 | MDR-TB | lineage2.2.1 | None | SRR10397173 | MDR-TB | lineage2.2.1 | None | SRR29385360 | MDR-TB | lineage2.2.1 | None | SRR30180408 | MDR-TB | lineage2.2.1 | None | SRR16370469 | MDR-TB | lineage2.2.1 | None | ERR13285716 | MDR-TB | lineage2.2.1 | None | SRR22137409 | MDR-TB | lineage3 | None | ERR13290989 | MDR-TB | lineage2.2.1 | None | SRR29539171 | MDR-TB | lineage2.2.1 | None | ERR13285929 | MDR-TB | lineage2.2.1 | None | ERR13283989 | MDR-TB | lineage4 | None | ERR9119511 | MDR-TB | lineage4.1.2.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349200 | MDR-TB | lineage4.4.1.1.1 | None | ERR10762264 | MDR-TB | lineage2.2.1 | None | ERR4819920 | MDR-TB | lineage3 | None | ERR5866530 | RR-TB | lineage2.2.1 | None | SRR9971049 | MDR-TB | lineage4.4.1.1.1 | None | SRR28741120 | MDR-TB | lineage2.2.1 | None | DRR130105 | Pre-XDR-TB | lineage2.2.2 | None | ERR3794541 | MDR-TB | lineage2.2.1 | None | ERR2510517 | Pre-XDR-TB | lineage3 | pk | ERR11082948 | MDR-TB | lineage4 | None | SRR29289128 | MDR-TB | lineage3 | None | SRR6855815 | MDR-TB | lineage4.4.1.1.1 | None | SRR3082093 | MDR-TB | lineage3.1.1 | None | ERR13266068 | Pre-XDR-TB | lineage3.1.2 | None | SRR25207016 | MDR-TB | lineage2.2.1.1 | None | ERR13290677 | MDR-TB | lineage2.2.1 | None | ERR13291119 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261704 | RR-TB | lineage2.2.1 | None | ERR13195565 | MDR-TB | lineage2.2.2 | None | ERR11067821 | MDR-TB | lineage3.1.1 | None | SRR28351663 | Pre-XDR-TB | lineage3 | None | ERR4812911 | RR-TB | lineage2.2.1 | pe | ERR11043766 | MDR-TB | lineage4 | None | SRR22528535 | MDR-TB | lineage4.3.3 | None | ERR4813854 | RR-TB | lineage4.3.2 | br | ERR7911441 | MDR-TB | lineage4.4.1.1.1 | za | ERR7910925 | MDR-TB | lineage2.2.1 | md | ERR7911027 | MDR-TB | lineage2.2.1 | md | SRR11342697 | MDR-TB | lineage4.4.1.1.1 | None | ERR8975063 | MDR-TB | lineage4.3.2.1 | None | ERR11488990 | MDR-TB | lineage4.4.1.1.1 | None | ERR7911067 | MDR-TB | lineage2.2.1 | md | ERR2677400 | MDR-TB | lineage2.2.1 | de | ERR2516176 | MDR-TB | lineage4 | be | ERR2307618 | MDR-TB | lineage2.2.1 | None | ERR13292582 | MDR-TB | lineage3 | None | SRR10315711 | MDR-TB | lineage4.4.1.1.1 | None | SRR7655781 | MDR-TB | lineage2.2.1 | None | SRR25206861 | MDR-TB | lineage4.5 | None | SRR10315714 | MDR-TB | lineage4.4.1.1.1 | None | ERR11043794 | MDR-TB | lineage4 | None | SRR10040379 | MDR-TB | lineage2.2.1 | None | SRR28351448 | MDR-TB | lineage3 | None | ERR5865665 | MDR-TB | lineage2.2.1 | None | ERR10762348 | MDR-TB | lineage2.2.1 | None | ERR13289258 | MDR-TB | lineage4.4.1.1.1 | None |
|---|
