Rv0668 - p.His748Pro
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
9 RR-TB
0 HR-TB
52 MDR-TB
31 Pre-XDR-TB
1 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.2 | 2 |
| lineage4.8 | 20 |
| lineage4.1.1.3.1 | 15 |
| lineage2.2.1 | 19 |
| lineage4.3.3 | 10 |
| lineage4.7 | 4 |
| lineage2.1 | 2 |
| lineage3 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.3.4.1 | 4 |
| lineage4 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.9 | 1 |
| lineage4.1.1 | 1 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage4.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 94 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR13191369 | Pre-XDR-TB | lineage2.2.2 | None | SRR28646089 | MDR-TB | lineage4.8 | None | SAMEA2534652 | MDR-TB | lineage4.8 | uz | SAMEA4041329 | MDR-TB | lineage4.8 | None | ERR2516816 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4817206 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4817221 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4817291 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4818880 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4818967 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4821985 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | SRR10306015 | RR-TB | lineage2.2.1 | None | SRR6045249 | Other | lineage4.1.1.3.1 | None | ERR1034703 | MDR-TB | lineage4.3.3 | pe | SRR29274035 | MDR-TB | lineage4.8 | None | SRR7592341 | MDR-TB | lineage4.7 | None | ERR552443_ERR552442 | MDR-TB | lineage4.8 | None | SRR29050895 | MDR-TB | lineage4.7 | None | SRR11567796 | Pre-XDR-TB | lineage2.2.1 | None | SRR29081653 | MDR-TB | lineage4.3.3 | None | ERR1465967 | MDR-TB | lineage4.8 | None | ERR12328188 | RR-TB | lineage2.2.1 | None | SRR21576561 | RR-TB | lineage2.1 | None | ERR4816181 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR11972330 | MDR-TB | lineage2.2.1 | None | SRR6964569 | Pre-XDR-TB | lineage3 | None | ERR4799300 | Pre-XDR-TB | lineage4.8 | in | ERR13266774 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29231821 | MDR-TB | lineage4.3.4.1 | None | ERR3287747 | MDR-TB | lineage4.3.3 | pe | ERR7911481 | MDR-TB | lineage2.2.1 | vn | ERR2706982 | MDR-TB | lineage4.3.4.1 | cd | ERR2516576 | MDR-TB | lineage4 | pe | ERR4814380 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4822260 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | SRR6046819 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | SRR6824680 | RR-TB | lineage2.2.1 | cn | ERR13290711 | RR-TB | lineage2.1 | None | ERR4798828 | Pre-XDR-TB | lineage4.8 | in | ERR4800375 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR9993080 | MDR-TB | lineage4.3.3 | None | SRR11567797 | Pre-XDR-TB | lineage2.2.1 | None | ERR8773838 | RR-TB | lineage4.8 | None | ERR552443 | MDR-TB | lineage4.8 | None | SRR13870403 | Pre-XDR-TB | lineage4.3.3 | None | ERR5866010 | MDR-TB | lineage4.3.3 | None | ERR4821219 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR10040333 | RR-TB | lineage4.4.2 | None | ERR8773836 | RR-TB | lineage4.8 | None | ERR7737800 | MDR-TB | lineage4.2.2.2 | None | SRR20969598 | MDR-TB | lineage2.2.2 | None | ERR11798617 | MDR-TB | lineage2.2.1 | None | SRR13232472 | Pre-XDR-TB | lineage2.2.1 | None | SRR9225002 | MDR-TB | lineage4.7 | None | ERR9992661 | MDR-TB | lineage4.3.3 | None | ERR4813830 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR551131 | MDR-TB | lineage4.8 | None | ERR1465842_ERR1465967 | MDR-TB | lineage4.8 | None | ERR11044187 | MDR-TB | lineage2.2.1 | None | SRR10397181 | MDR-TB | lineage4.2.1.1 | None | ERR9993015 | MDR-TB | lineage4.3.3 | None | ERR2707233 | MDR-TB | lineage4.3.4.1 | cd | ERR4831037 | MDR-TB | lineage4.9 | np | ERR1465842 | MDR-TB | lineage4.8 | None | SRR22528568 | MDR-TB | lineage4.1.1 | None | SAMEA2533723 | MDR-TB | lineage4.8 | uz | ERR2516980 | MDR-TB | lineage4.8 | gb | ERR4821423 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | SRR10380209 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR4827583 | MDR-TB | lineage2.2.1 | None | SRR5818583 | MDR-TB | lineage4.1.1.1 | dj | ERR5866009 | MDR-TB | lineage4.3.3 | None | SRR11786862 | MDR-TB | lineage2.2.1 | None | ERR552442 | MDR-TB | lineage4.8 | None | SRR6832006 | MDR-TB | lineage2.2.1 | None | ERR8975913 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1723744 | RR-TB | lineage2.2.1 | cn | SRR29273710 | MDR-TB | lineage4.8 | None | SRR6930927 | MDR-TB | lineage1.2.1.2 | None | ERR13276221 | MDR-TB | lineage2.2.1 | None | SRR29051332 | MDR-TB | lineage4.7 | None | SRR20969473 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260876 | MDR-TB | lineage4.3.3 | None | ERR13266684 | Pre-XDR-TB | lineage2.2.1 | None | ERR551131_ERR551130 | MDR-TB | lineage4.8 | None | ERR551130 | MDR-TB | lineage4.8 | None | SRR29081590 | MDR-TB | lineage4.1.2.1.1 | None | SRR11786872 | MDR-TB | lineage2.2.1 | None | SRR25827607 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | None | SRR3105739 | Pre-XDR-TB | lineage4.2.2 | None | ERR3148169 | XDR-TB | lineage4.1.2.1 | mx | SRR29231854 | MDR-TB | lineage4.3.4.1 | None | SRR8651621 | Pre-XDR-TB | lineage2.2.1 | cn | ERR13289558 | Pre-XDR-TB | lineage4.1.1.3.1 | None |
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