lineage | Count |
---|---|
lineage2.2.1 | 16 |
lineage4.1.1 | 31 |
lineage2.2.2 | 6 |
lineage3 | 2 |
lineage4.4.1.1.1 | 2 |
lineage4.3.3 | 1 |
lineage4.1.2.1 | 4 |
spoligotype | Count |
---|---|
None | 62 |
ID | Drug resistance | Lineage | Country iso2 | SRR12416844 | Pre-XDR-TB | lineage2.2.1 | None | ERR2184684 | MDR-TB | lineage4.1.1 | pe | SRR1062820 | Pre-XDR-TB | lineage2.2.1 | None | ERR4812982 | MDR-TB | lineage4.1.1 | pe | SAMN02360555 | Pre-XDR-TB | lineage2.2.2 | kr | SRR1013551 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048851 | Pre-XDR-TB | lineage2.2.2 | None | ERR4813330 | Pre-XDR-TB | lineage4.1.1 | None | ERR12117902 | Pre-XDR-TB | lineage4.1.1 | None | ERR13260701 | MDR-TB | lineage4.1.1 | None | SRR29772791 | Pre-XDR-TB | lineage3 | None | SRR22461582 | MDR-TB | lineage4.1.1 | None | SRR13870381 | Pre-XDR-TB | lineage4.1.1 | None | SRR13870373 | Pre-XDR-TB | lineage4.1.1 | None | ERR9806702 | MDR-TB | lineage2.2.1 | None | SRR11349137 | RR-TB | lineage4.4.1.1.1 | None | ERR4812985 | MDR-TB | lineage4.1.1 | pe | ERR4813003 | MDR-TB | lineage4.1.1 | None | ERR10610287 | MDR-TB | lineage2.2.1 | None | ERR3148037 | Pre-XDR-TB | lineage4.3.3 | None | ERR4812816 | MDR-TB | lineage4.1.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911341 | MDR-TB | lineage4.1.1 | pe | ERR4813341 | Pre-XDR-TB | lineage4.1.1 | pe | ERR4813147 | Pre-XDR-TB | lineage4.1.1 | None | SRR13870369 | Pre-XDR-TB | lineage4.1.1 | None | ERR4812974 | Pre-XDR-TB | lineage4.1.1 | None | SAMN02350409 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048850 | Pre-XDR-TB | lineage2.2.2 | None | SRR21887671 | MDR-TB | lineage2.2.1 | None | ERR13284832 | MDR-TB | lineage4.1.2.1 | None | SRR1723619 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4812833 | MDR-TB | lineage4.1.1 | pe | ERR5865518 | MDR-TB | lineage2.2.1 | None | ERR5865519 | MDR-TB | lineage2.2.1 | None | ERR13261662 | Pre-XDR-TB | lineage4.1.1 | None | ERR8975683 | RR-TB | lineage4.4.1.1.1 | None | SRR10808511 | MDR-TB | lineage4.1.2.1 | None | ERR11082756 | MDR-TB | lineage4.1.2.1 | None | SRR1013552 | Pre-XDR-TB | lineage2.2.2 | None | SRR1011450 | Pre-XDR-TB | lineage2.2.1 | None | ERR7910877 | MDR-TB | lineage4.1.1 | None | ERR7911340 | Pre-XDR-TB | lineage4.1.1 | pe | ERR13260649 | MDR-TB | lineage4.1.1 | None | SRR29385410 | Pre-XDR-TB | lineage2.2.2 | None | SRR10808814 | MDR-TB | lineage4.1.1 | None | SRR6824379 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4812803 | MDR-TB | lineage4.1.1 | None | ERR4813021 | MDR-TB | lineage4.1.1 | None | ERR10610286 | MDR-TB | lineage2.2.1 | None | SAMN02350410 | Pre-XDR-TB | lineage2.2.1 | za | ERR7910876 | MDR-TB | lineage4.1.1 | None | SRR22461690 | MDR-TB | lineage4.1.1 | None | ERR4813137 | Pre-XDR-TB | lineage4.1.1 | None | ERR13260638 | MDR-TB | lineage4.1.1 | None | ERR2184496 | MDR-TB | lineage4.1.2.1 | pe | ERR7910861 | MDR-TB | lineage4.1.1 | pe | ERR4813106 | Pre-XDR-TB | lineage4.1.1 | None | ERR4813150 | Pre-XDR-TB | lineage4.1.1 | None | SRR1011451 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510638 | MDR-TB | lineage3 | pk | SRR1062821 | Pre-XDR-TB | lineage2.2.1 | None |
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