ERR4813710
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR10748492
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13260435
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2184212
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR3732641
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260404
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260105
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7911345
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13261651
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261909
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261907
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813377
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR9992759
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4829525
|
Pre-XDR-TB
|
lineage4.3.3
|
it
|
ERR7911354
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4872232
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR29273922
|
MDR-TB
|
lineage4.7
|
None
|
ERR2510165
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4872172
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR775310
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2653132
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR7517816
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR7911003
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13284347
|
MDR-TB
|
lineage4.2.2.1
|
None
|
ERR13261946
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260108
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4811853
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813475
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
SRR16370510
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR29093323
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR6866590
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751566
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR7910862
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR16915747
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR16370497
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR6384969
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4813624
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR29273851
|
MDR-TB
|
lineage4.7
|
None
|
ERR4812855
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812750
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393953
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR25827751
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR3276176
|
MDR-TB
|
lineage4.3.3
|
nl
|
ERR11050243
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813074
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR13870396
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261611
|
MDR-TB
|
lineage4.1.2.1;lineage4.3.3
|
None
|
ERR13260531
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813320
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7910846
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260700
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR3732650
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260389
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4872099
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR3287428
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR9124904
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4813028
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR16370498
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813425
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2652997
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR28393536
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR22461577
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393894
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751620
|
Pre-XDR-TB
|
lineage4
|
pe
|
ERR4813648
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813704
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28706375
|
HR-TB
|
lineage4.3.3
|
None
|
ERR1034705
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR10680146
|
MDR-TB
|
lineage4.1
|
None
|
ERR9029867
|
Pre-XDR-TB
|
lineage4
|
None
|
ERR2510150
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR11069002
|
MDR-TB
|
lineage4.2.2.1
|
None
|
SRR22461678
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR10748368
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2184437
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2516650
|
Pre-XDR-TB
|
lineage4
|
pe
|
ERR2653134
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR4813000
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4829366
|
MDR-TB
|
lineage4.7
|
it
|
ERR4813622
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751406
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812165
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813033
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2516503
|
Pre-XDR-TB
|
lineage4
|
pe
|
ERR4812892
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812890
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813389
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813411
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4800624
|
Pre-XDR-TB
|
lineage3.1.2.1
|
None
|
SRR13870367
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813439
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813450
|
MDR-TB
|
lineage4.1.2.1;lineage4.3.3
|
pe
|
ERR9029864
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR10808577
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2510212
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR7910863
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR845941
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2184424
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812476
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR3732582
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813356
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287864
|
MDR-TB
|
lineage4
|
pe
|
ERR13260660
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261643
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287437
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
SRR16915727
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR9119539
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR4812888
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260184
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR9119570
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR5865446
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13276319
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR3732594
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR10748449
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11662283
|
MDR-TB
|
lineage4.5
|
None
|
ERR3287347
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260556
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6384968
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4813589
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR29094407
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393763
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261644
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813017
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4811827
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4872133
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR779897
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2184500
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR7911355
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260415
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR13870375
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR16058703
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4813415
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR6930910
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR29273865
|
MDR-TB
|
lineage4.7
|
None
|
SRR28393931
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13267443
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13284283
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR5865443
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMEA5569539
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813581
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR987708
|
MDR-TB
|
lineage3
|
None
|
SRR10808436
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR24256311
|
MDR-TB
|
lineage4.2.1.1
|
None
|
SRR28393497
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260654
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812898
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260395
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812924
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4811963
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR29094386
|
MDR-TB
|
lineage4.1.2.1.1
|
None
|
ERR13261592
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR10748572
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2510172
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2510197
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813071
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR12118004
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813458
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR22461583
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393551
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR28393576
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393428
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR5865444
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813380
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751362
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR7517771
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1034897
|
MDR-TB
|
lineage4.2.2.1
|
pt
|
ERR6866686
|
MDR-TB
|
lineage4.3.2;lineage4.3.3
|
None
|
ERR4812961
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR22461574
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR10808507
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR11081787
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR22461642
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4024846
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR22461600
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR21691030
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813618
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMEA5569642
|
Pre-XDR-TB
|
lineage4
|
None
|
ERR751435
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813022
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR22048358
|
MDR-TB
|
lineage4.7
|
None
|
SRR16370470
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR775332
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813708
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751578
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR26937125
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4812675
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261566
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812021
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR9806942
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4812970
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4799798
|
Pre-XDR-TB
|
lineage3
|
in
|
ERR4813159
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4813216
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
SRR28393596
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR20969899
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13260526
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR29081667
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261941
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813592
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2864274
|
MDR-TB
|
lineage4.7
|
pt
|
ERR751387
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4799128
|
Pre-XDR-TB
|
lineage3.1.2.1
|
in
|
ERR2510141
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813313
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812842
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260704
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261642
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813640
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287449
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR7517836
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR6865900
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR775300
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR28393435
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813550
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813680
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28858731
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813010
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751562
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR751619
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4812081
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7911343
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13261912
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2510233
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260679
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260699
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR10808592
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3256179
|
HR-TB
|
lineage1.2.1.2.1
|
ph
|
ERR10748161
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4813326
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813677
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813730
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812115
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813311
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812953
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260136
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393413
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393782
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR28393776
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR22461653
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR7517768
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR28393459
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393452
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR22461602
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR28393770
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393457
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR21576593
|
RR-TB
|
lineage4.5
|
None
|
SRR3732651
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR16370475
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR11043345
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR10828642
|
MDR-TB
|
lineage4.5
|
None
|
ERR4812854
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813284
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR29094433
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR10748197
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2864282
|
MDR-TB
|
lineage4.7
|
pt
|
ERR5865445
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7910996
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR6865374
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR16370487
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4178303
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813661
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR22461643
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR21576576
|
MDR-TB
|
lineage4.5
|
None
|
ERR3287346
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR15661607
|
MDR-TB
|
lineage4.8
|
None
|
ERR9119505
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR9119626
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR13260207
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813599
|
MDR-TB
|
lineage4.3.3;lineage4.3.4.2
|
None
|
ERR2653116
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR775337
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4831634
|
HR-TB
|
lineage1.1.1;lineage2.2.1
|
vn
|
SRR12420423
|
RR-TB
|
lineage2.2.1
|
None
|
ERR7910878
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR7910883
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR1035013
|
Pre-XDR-TB
|
lineage2.2.1
|
za
|
ERR775315
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR12117937
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR4799428
|
MDR-TB
|
lineage3
|
in
|
SRR22461693
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751377
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260685
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287412
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR22461599
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813721
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR26112150
|
MDR-TB
|
lineage4.1.4
|
None
|
ERR2510169
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260406
|
MDR-TB
|
lineage4.3.3
|
None
|