lineage | Count |
---|---|
lineage2.2.2 | 6 |
lineage2.2.1 | 9 |
lineage4.9 | 3 |
lineage4.9.1 | 4 |
lineage2.2.1.1 | 1 |
lineage2.2 | 3 |
lineage4.3.4.2.1 | 1 |
lineage4.5 | 1 |
lineage2.2.2;lineage2.2.1 | 2 |
3 | |
lineage4.4.1.1 | 1 |
lineage4.4.1.2 | 1 |
lineage3 | 1 |
lineage4.6.2.2 | 1 |
lineage4.8 | 2 |
lineage4.1.2.1 | 3 |
spoligotype | Count |
---|---|
None | 42 |
ID | Drug resistance | Lineage | Country iso2 | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283049 | Sensitive | lineage4.9 | None | ERR2515352 | Sensitive | lineage2.2.1 | None | SRR2100547 | Sensitive | lineage4.9.1 | None | ERR228190 | Sensitive | lineage4.9.1 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | ERR176762 | Sensitive | lineage4.9.1 | mw | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | SRR1013568 | Pre-XDR-TB | lineage2.2 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR8975534 | Sensitive | lineage4.3.4.2.1 | None | SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1013633 | MDR-TB | lineage2.2 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1048996 | HR-TB | lineage4.5 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1048982 | HR-TB | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048885 | MDR-TB | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1049041 | MDR-TB | None | SRR1049023 | HR-TB | lineage2.2 | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR18213904 | Sensitive | lineage4.9.1 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR17567930 | Other | lineage4.4.1.1 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | SRR19303775 | Other | lineage3 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR19303788 | Sensitive | lineage4.8 | None | SRR19303779 | Sensitive | lineage4.8 | None | SRR19303776 | Other | lineage4.1.2.1 | None | SRR19303931 | Other | lineage2.2.1 | None | SRR19303806 | Sensitive | lineage4.1.2.1 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None |
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